Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G64380 528 / 0 Inositol monophosphatase family protein (.1) AT3G54050 271 / 2e-87 HCEF1 high cyclic electron flow 1 (.1.2) AT1G43670 233 / 2e-73 FINS1, AtcFBP FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) AT3G55800 82 / 1e-16 SBPASE sedoheptulose-bisphosphatase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020433 [exp] 653 / 0 AT5G64380 528 / 0.0 Inositol monophosphatase family protein (.1) Lus10027748 [exp] 269 / 1e-86 AT3G54050 655 / 0.0 high cyclic electron flow 1 (.1.2) Lus10035545 [exp] 269 / 1e-86 AT3G54050 655 / 0.0 high cyclic electron flow 1 (.1.2) Lus10021115 [exp] 266 / 2e-85 AT3G54050 647 / 0.0 high cyclic electron flow 1 (.1.2) Lus10017195 [exp] 239 / 5e-75 AT3G54050 601 / 0.0 high cyclic electron flow 1 (.1.2) Lus10028580 [exp] 229 / 5e-72 AT1G43670 618 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Lus10018885 [exp] 228 / 2e-71 AT1G43670 620 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Lus10040228 [exp] 80 / 3e-16 AT3G55800 611 / 0.0 sedoheptulose-bisphosphatase (.1) Lus10028261 [exp] 79 / 1e-15 AT3G55800 611 / 0.0 sedoheptulose-bisphosphatase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G042900 [exp] 589 / 0 AT5G64380 552 / 0.0 Inositol monophosphatase family protein (.1) Potri.016G106900 [exp] 264 / 1e-84 AT3G54050 619 / 0.0 high cyclic electron flow 1 (.1.2) Potri.016G109000 [exp] 248 / 2e-78 AT3G54050 526 / 0.0 high cyclic electron flow 1 (.1.2) Potri.005G191400 [exp] 229 / 5e-72 AT1G43670 609 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Potri.002G069000 [exp] 223 / 1e-69 AT1G43670 619 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Potri.010G193300 [exp] 86 / 2e-18 AT3G55800 625 / 0.0 sedoheptulose-bisphosphatase (.1) Potri.008G063800 [exp] 85 / 8e-18 AT3G55800 629 / 0.0 sedoheptulose-bisphosphatase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0171 [flax] [poplar] Phospoesterase PF00316 [flax] [poplar] FBPase Fructose-1-6-bisphosphatase, N-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10007061 pacid=23153215 polypeptide=Lus10007061 locus=Lus10007061.g ID=Lus10007061.BGIv1.0 annot-version=v1.0 ATGCAATCATCCGCCATATCCACAACTCTCTCTTCACTTCCCCTCCCGAAGTCGCACTCTTACCCGCCTACATTCAGCTTCTCCATCCTCCACAACCCAA TTCTTCTCCGCCGCTACAATTGCTCTTTCAAGCCGAGGATGGCTTCCTGTGGTTCTGTATTTAGCACGAAGTCGCAACTCAGTTCACCCTCGAAGAATGA CGATGGCGTCTACACTCTAATGGAGTATATGGGAAAGGGCGGAGTCGGTTTGGGCGATGATTTGGTTGTTCTATTTGATCATTTGCAGTACGCTTCTAAG CGAATCGCTGCCCTTGTTGCTTCTCCTTTTAATTCCAGGCTCGGAAAGCAGAACGACGCCGTTACCAGCAGCGGCGGCGGCGTCGGGTCGGAGAGAGATG CACCGAAACCGCTCGACATATTGTCTAATGAGATCATCTTATCAAGTCTTCGAAATTCGGGGAAGGTTGCGGTCATGGCTTCTGAAGAAGATAACCAACC GATTTGGATACACCACGATGGACCATTTGTTGTGGTAACAGACCCCCTTGACGGTTCCCGGAACATAGATGCGTCTATCCCCACGGGAACTATATTTGGA GTATACAAACGCCTTGTAGAACTGGACCACCTCCCTCAAGAGGAGAAGGCTATGCTCAATTCTTTACAGAGTGGAGCCAGACTTGTGGCTGCTGCTTACA TTCTTTATTCATCGGCTACCATATTTTGCACCAGCTTTGGCTCTGGAACACATGCATTTACCTTGGACCACACTACCGGAGACTTTGTTCTTACTCATCC AGGGATTAATATTCCTCCTCGAGGGCAAATATACTCTGTGAATGATGCACGGTACTTTGACTGGCCGGAAGGACTAAGGCGTTATATCGACACAGTGAGG CAAGGGAAAGGAAGATATCCAAAGAAGTACTCAGCCCGCTACATATGTTCTCTAGTTGCTGATTTGCATCGGACGCTGCTGTATGGTGGAATTGCAATGA ACCCAAGGGATCATCTTCGGCTTGTTTATGAAGCCAATCCTCTCAGCTTTCTGGTGGAGCAAGCTGGGGGAAAAGGTTCCGATGGTCGAAGTAGGATACT TTCCCTCCAACCTGTGAAGCTGCACCAAAGACTCCCTTTATTCTTGGGAAGTCCGGAGGACATAGAAGAGTTAGAGAGTTATGGGGACGTACAACAGAGA GTAAATCCTGGTTATGAAGTTTGA
AA sequence Show only first row Show all	>Lus10007061 pacid=23153215 polypeptide=Lus10007061 locus=Lus10007061.g ID=Lus10007061.BGIv1.0 annot-version=v1.0 MQSSAISTTLSSLPLPKSHSYPPTFSFSILHNPILLRRYNCSFKPRMASCGSVFSTKSQLSSPSKNDDGVYTLMEYMGKGGVGLGDDLVVLFDHLQYASK RIAALVASPFNSRLGKQNDAVTSSGGGVGSERDAPKPLDILSNEIILSSLRNSGKVAVMASEEDNQPIWIHHDGPFVVVTDPLDGSRNIDASIPTGTIFG VYKRLVELDHLPQEEKAMLNSLQSGARLVAAAYILYSSATIFCTSFGSGTHAFTLDHTTGDFVLTHPGINIPPRGQIYSVNDARYFDWPEGLRRYIDTVR QGKGRYPKKYSARYICSLVADLHRTLLYGGIAMNPRDHLRLVYEANPLSFLVEQAGGKGSDGRSRILSLQPVKLHQRLPLFLGSPEDIEELESYGDVQQR VNPGYEV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G64380			Inositol monophosphatase famil...		Lus10007061 [exp]	0	1
AT1G14150		PnsL2, PQL2, PQ...	PsbQ-like 1, Photosynthetic ND...		Lus10037159 [exp]	1.4	0.9467
AT5G64380			Inositol monophosphatase famil...		Lus10020433 [exp]	3.9	0.9331
AT3G23700			Nucleic acid-binding proteins ...		Lus10022587 [exp]	4.9	0.9387
AT3G09050			unknown protein		Lus10027783 [exp]	5.5	0.9136
AT5G19740			Peptidase M28 family protein (...		Lus10043036 [exp]	8.1	0.8693
AT5G20140			SOUL heme-binding family prote...		Lus10013345 [exp]	9.5	0.9253
AT1G44575		CP22, PSBS, NPQ...	PHOTOSYSTEM II SUBUNIT S, NONP...		Lus10018163 [exp]	13.9	0.9258
AT1G73885			unknown protein		Lus10034345 [exp]	14.0	0.9283
AT5G08410		FTRA2	ferredoxin/thioredoxin reducta...		Lus10013448 [exp]	16.7	0.9262
AT3G27390			unknown protein		Lus10032110 [exp]	17.0	0.8830

Compare expression of checked genes

Lus10007061 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.