Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10007207 pacid=23167589 polypeptide=Lus10007207 locus=Lus10007207.g ID=Lus10007207.BGIv1.0 annot-version=v1.0 ATGTTCATCCTGCTAGGAGCAGAGTGGACTGATATATTAGCATGGCCGGGGCGGAGGAGACCCATTGTTAGAGATCATGAAGAATGGTTTGAAGGAGCAA CTTGGGGAGTTCTCATCATTGGTTGGGCAATGACCGTACGACCACCATCTGATTTGTTCATTTCGGCAAGAGACTGGATGTGCTCGATGATGTTTGACCG AGCAAGGCAAATCTGCCCATGGAACAACATCCTCCTGAACTCGGAAAGTTCCGTCCGCACACATTTGAGACAGAATACTGAGGCATGTAATACCCTTGCC ACAAAGGGAAAGCGGTCGATATGCATGAGAGAGATTCAAGAGCAGAGGGGGGACTAG
AA sequence Show only first row Show all	>Lus10007207 pacid=23167589 polypeptide=Lus10007207 locus=Lus10007207.g ID=Lus10007207.BGIv1.0 annot-version=v1.0 MFILLGAEWTDILAWPGRRRPIVRDHEEWFEGATWGVLIIGWAMTVRPPSDLFISARDWMCSMMFDRARQICPWNNILLNSESSVRTHLRQNTEACNTLA TKGKRSICMREIQEQRGD

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10007207 [exp]	0	1
AT4G14385			unknown protein		Lus10033887 [exp]	6.3	0.7814
AT1G59077			unknown protein		Lus10022089 [exp]	13.5	0.8066
AT5G59140			BTB/POZ domain-containing prot...		Lus10040746 [exp]	13.6	0.8147
AT1G10890			unknown protein		Lus10043141 [exp]	26.3	0.7875
AT5G47890			NADH-ubiquinone oxidoreductase...		Lus10030922 [exp]	29.0	0.7930
AT5G52200		AtI-2	inhibitor-2, phosphoprotein ph...		Lus10005751 [exp]	33.4	0.7648
AT4G14965		ATMAPR4	membrane-associated progestero...		Lus10018026 [exp]	37.6	0.7691
AT2G40600			appr-1-p processing enzyme fam...		Lus10034226 [exp]	38.3	0.7795
AT5G06250	B3		AP2/B3-like transcriptional fa...		Lus10004226 [exp]	39.6	0.7530
AT1G01940			Cyclophilin-like peptidyl-prol...		Lus10009237 [exp]	41.4	0.7580

Compare expression of checked genes

Lus10007207 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.