Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G32750 498 / 2e-173 Exostosin family protein (.1) AT4G13990 456 / 1e-156 Exostosin family protein (.1) AT2G29040 461 / 6e-156 Exostosin family protein (.1) AT2G20370 448 / 3e-152 AtMUR3, MUR3, KAM1 MURUS 3, KATAMARI 1, Exostosin family protein (.1) AT2G32740 432 / 7e-148 ATGT13 ARABIDOPSIS GALACTOSYLTRANSFERASE 13, galactosyltransferase 13 (.1) AT2G31990 395 / 1e-133 Exostosin family protein (.1) AT1G63450 317 / 7e-101 RHS8 root hair specific 8 (.1) AT1G68470 310 / 1e-100 Exostosin family protein (.1) AT5G41250 310 / 2e-99 Exostosin family protein (.1) AT5G62220 309 / 3e-99 ATGT18 glycosyltransferase 18 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010677 [exp] 939 / 0 AT2G32750 497 / 7e-173 Exostosin family protein (.1) Lus10001028 [exp] 617 / 0 AT4G13990 499 / 1e-173 Exostosin family protein (.1) Lus10006694 [exp] 476 / 6e-164 AT4G13990 617 / 0.0 Exostosin family protein (.1) Lus10001578 [exp] 472 / 9e-162 AT2G29040 566 / 0.0 Exostosin family protein (.1) Lus10004967 [exp] 471 / 3e-161 AT2G29040 573 / 0.0 Exostosin family protein (.1) Lus10016532 [exp] 464 / 2e-159 AT2G29040 546 / 0.0 Exostosin family protein (.1) Lus10024961 [exp] 450 / 5e-153 AT2G20370 959 / 0.0 MURUS 3, KATAMARI 1, Exostosin family protein (.1) Lus10022862 [exp] 447 / 7e-152 AT2G20370 951 / 0.0 MURUS 3, KATAMARI 1, Exostosin family protein (.1) Lus10007037 [exp] 422 / 3e-144 AT4G13990 540 / 0.0 Exostosin family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G147800 [exp] 526 / 0 AT4G13990 534 / 0.0 Exostosin family protein (.1) Potri.001G321000 [exp] 473 / 5e-163 AT4G13990 660 / 0.0 Exostosin family protein (.1) Potri.009G032500 [exp] 474 / 1e-161 AT2G29040 588 / 0.0 Exostosin family protein (.1) Potri.002G256200 [exp] 449 / 5e-153 AT2G20370 964 / 0.0 MURUS 3, KATAMARI 1, Exostosin family protein (.1) Potri.001G382200 [exp] 325 / 4e-106 AT1G68470 530 / 0.0 Exostosin family protein (.1) Potri.001G381900 [exp] 324 / 1e-105 AT1G68470 528 / 0.0 Exostosin family protein (.1) Potri.001G105300 [exp] 314 / 2e-100 AT1G63450 653 / 0.0 root hair specific 8 (.1) Potri.012G130700 [exp] 297 / 5e-95 AT5G62220 626 / 0.0 glycosyltransferase 18 (.1) Potri.015G132600 [exp] 285 / 3e-90 AT5G62220 619 / 0.0 glycosyltransferase 18 (.1) Potri.001G120800 [exp] 277 / 9e-88 AT4G22580 593 / 0.0 Exostosin family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03016 [flax] [poplar] Exostosin Exostosin family
Representative CDS sequence Show only first row Show all	>Lus10007426 pacid=23180213 polypeptide=Lus10007426 locus=Lus10007426.g ID=Lus10007426.BGIv1.0 annot-version=v1.0 ATGGAGCAGAAGAGCAGCAACCACACCATAGCATGTACTCAACTCTGGTTTGCCATTCTCATCGCCTTCTCTTTGCTATTAATCTCTCGCCGCACTGTCG ATTACACCTCTCCATTCATTGGCGAGAGAAGAGAGAAACTCGCTGTTCTATTCACCACTTTATTCAACAGCCATTCTGATGATGAACCAGTTACAACAGC TACTACTACGGCTGCTGCGAATAATACTTGCGCTGGCCGTTACATCTACGTTCATGATCTGCCGGACCGTTTCAACAACGAAATCGTCCGGAACTGTCGC TATAATTCTCTCCTCAAATGGCACGACATGTGCCCGTCGCTGTTGAATTTCGGACTCGGTACTCAAGTGCAGGATCCTGGTAAGGTTCTCATGGAGAAAA GCTGGTATGTGACTAATCAGTTCACCCTTGAAGTGATTTTCCACCACAGGATGAAACGATACGACTGTTTAACAAACGATTCCTCGTTAGCCTCCGCTAT ATTCGTTCCGTACTATGCTGGTTTCGATGTCGGAAGACACCTTTGGGGTGATTATAATACTACCGTCAGGGATGCATTAGGTATTGAGCTTGTGAAGTGG CTCAGAAACCAACCTGAATGGAATAAGGGACCTAAACGGTTGTTTGGTAAAGACCATTTCTTCGTTTCGGGAAGGATAGCTTGGGATCTTCACAGATCAT CAAACGACGACGACACGCATTGGGGAAGCAATCTGATGCAACTCCCCGAATCGAAGAACATGACGGTGCTTTCTATCGAAACGACTTCGTCCAGCAACGA GTTTGCAATTCCATATCCGACATATTTCCATCCTAGGGGAGCGAAGCAGGTGCATCAATGGCAAAAGAGAATCAGAAGACAGAAAAGGCCGTACCTTTTC TCGTTTGTTGGCGCCCCAAGAGCTAATACCGCGGATTCCATCCGTGGAGAGCTCATGGAGCAGTGCCGGGATTCGGGGAAGAGATCATGCAAGCTTCTCA ACTGTCAGTGTACGAAATGCGAGAGTCCGGTCGAGGTGATGAAAGTGCTTCAGAGATCGATCTTCTGCTTGCAGCCGAGTGGAGATTCTTACACGAGGAG GTCGATTTTCGATTCGATCTTGGCTGGGTGCATCCCTGTGTTCTTCCATCCTTTCTCCGCGTACGGGCAGTACACGTGGCATTTTCCGAGCAATTATTCT TCATACTCTGTTTACATACCAGAGAAGCTTGTGAAACAAGGCAAAGTCAGCGTCAGGAAAAAGCTGCTTGGGATTTCGAAGCAAGAGATTGCGGCAATGA GACAGGTGGTGGTGGAGTTGATTCCGAAGGTGATATATAGGAATCCTGAGTCGAAACCGAATGATTTTGAAGATGCATTTGACATTGCGGTAAATCGAGT GCTCGAAAGAGTAGCCGAAATTAGAAGAAGGGACAGTGAGGAAGGAGAAGAAGATGCAGCTGGTAGCTGGAAGTTGAAAATGGATGGAATAGGGAAAGAT CACGAGTGGGATGAATTCTTCTGA
AA sequence Show only first row Show all	>Lus10007426 pacid=23180213 polypeptide=Lus10007426 locus=Lus10007426.g ID=Lus10007426.BGIv1.0 annot-version=v1.0 MEQKSSNHTIACTQLWFAILIAFSLLLISRRTVDYTSPFIGERREKLAVLFTTLFNSHSDDEPVTTATTTAAANNTCAGRYIYVHDLPDRFNNEIVRNCR YNSLLKWHDMCPSLLNFGLGTQVQDPGKVLMEKSWYVTNQFTLEVIFHHRMKRYDCLTNDSSLASAIFVPYYAGFDVGRHLWGDYNTTVRDALGIELVKW LRNQPEWNKGPKRLFGKDHFFVSGRIAWDLHRSSNDDDTHWGSNLMQLPESKNMTVLSIETTSSSNEFAIPYPTYFHPRGAKQVHQWQKRIRRQKRPYLF SFVGAPRANTADSIRGELMEQCRDSGKRSCKLLNCQCTKCESPVEVMKVLQRSIFCLQPSGDSYTRRSIFDSILAGCIPVFFHPFSAYGQYTWHFPSNYS SYSVYIPEKLVKQGKVSVRKKLLGISKQEIAAMRQVVVELIPKVIYRNPESKPNDFEDAFDIAVNRVLERVAEIRRRDSEEGEEDAAGSWKLKMDGIGKD HEWDEFF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G32750			Exostosin family protein (.1)		Lus10007426 [exp]	0	1
AT3G57120			Protein kinase superfamily pro...		Lus10011518 [exp]	5.9	0.8329
					Lus10001565 [exp]	6.8	0.7259
AT1G60370			F-box and associated interacti...		Lus10008162 [exp]	9.7	0.7621
AT5G40010		ASD, AATP1	ATPase-in-Seed-Development, AA...		Lus10015354 [exp]	10.2	0.8162
AT1G50420	GRAS	SCL-3, SCL3	scarecrow-like 3 (.1)		Lus10016892 [exp]	10.8	0.8039
AT2G13620		ATCHX15	CATION/H+ EXCHANGER 15, cation...		Lus10035312 [exp]	13.4	0.8017
AT1G24430			HXXXD-type acyl-transferase fa...		Lus10006219 [exp]	15.8	0.7472
AT4G09900		ATMES12	ARABIDOPSIS THALIANA METHYL ES...		Lus10009489 [exp]	16.0	0.8123
AT5G38420			Ribulose bisphosphate carboxyl...		Lus10005093 [exp]	20.2	0.7674
AT2G34290			Protein kinase superfamily pro...		Lus10035236 [exp]	21.3	0.7919

Compare expression of checked genes

Lus10007426 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.