Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G40190 103 / 2e-26 LEW3 LEAF WILTING 3, UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007500 [exp] 154 / 2e-45 AT2G40190 745 / 0.0 LEAF WILTING 3, UDP-Glycosyltransferase superfamily protein (.1) Lus10028977 [exp] 153 / 3e-45 AT2G40190 751 / 0.0 LEAF WILTING 3, UDP-Glycosyltransferase superfamily protein (.1) Lus10007909 [exp] 134 / 1e-41 AT2G40190 152 / 3e-45 LEAF WILTING 3, UDP-Glycosyltransferase superfamily protein (.1) Lus10014773 [exp] 135 / 1e-39 AT2G40190 188 / 1e-55 LEAF WILTING 3, UDP-Glycosyltransferase superfamily protein (.1) Lus10021233 [exp] 48 / 4e-08 AT2G40190 52 / 3e-09 LEAF WILTING 3, UDP-Glycosyltransferase superfamily protein (.1) Lus10008976 [exp] 44 / 1e-05 AT2G40190 192 / 1e-59 LEAF WILTING 3, UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G095500 [exp] 116 / 2e-31 AT2G40190 735 / 0.0 LEAF WILTING 3, UDP-Glycosyltransferase superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10007501 pacid=23176522 polypeptide=Lus10007501 locus=Lus10007501.g ID=Lus10007501.BGIv1.0 annot-version=v1.0 ATGCTAAATTCAATACGAGGTCTGGGAATACTCGAATCCGGGCCAAACTTCCACTTCCAATGCATGCATGACTCTAAGCCAAAAGCCTCTTGGCACAAGC TTGTTTCCAGGGGTGCACATCAGCACTCACTAACTAAGGACAGTCCTTTCAACATCTTCACCTTCATCGCCTTCCACATTCTCACCTCCCGACGGAACCG CCAAAAAGCCGTCGGTTTCTTCCACCCTTACACAAACAACGGCGGCGGCGGGGAACACATCTTACGGTGCGCAGTCAAAGCCATCCAGGAAGAAATCCCC GATCTCAATTGTATCGTCTACACCGACGATCATGAAGCATCTCCTCAGTACCTCCTCGCCCGGGCCACCGACCGTTTCCGAGTCCAATTGCTCCGTCTGC TGGAGGAGCTCGATTCACCATGA
AA sequence Show only first row Show all	>Lus10007501 pacid=23176522 polypeptide=Lus10007501 locus=Lus10007501.g ID=Lus10007501.BGIv1.0 annot-version=v1.0 MLNSIRGLGILESGPNFHFQCMHDSKPKASWHKLVSRGAHQHSLTKDSPFNIFTFIAFHILTSRRNRQKAVGFFHPYTNNGGGGEHILRCAVKAIQEEIP DLNCIVYTDDHEASPQYLLARATDRFRVQLLRLLEELDSP

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G40190		LEW3	LEAF WILTING 3, UDP-Glycosyltr...		Lus10007501 [exp]	0	1
AT2G34790		MEE23, EDA28	MATERNAL EFFECT EMBRYO ARREST ...		Lus10033516 [exp]	4.7	0.7857
AT5G06060			NAD(P)-binding Rossmann-fold s...		Lus10010875 [exp]	9.4	0.6881
AT4G27570			UDP-Glycosyltransferase superf...		Lus10039236 [exp]	22.0	0.7062
					Lus10000298 [exp]	24.2	0.7044
AT5G51105			Protein of unknown function (D...		Lus10019549 [exp]	30.8	0.6898
					Lus10007186 [exp]	31.2	0.7039
					Lus10033211 [exp]	33.2	0.7010
AT1G54860			Glycoprotein membrane precurso...		Lus10004470 [exp]	33.9	0.6996
AT3G55500		ATHEXPALPHA1.7,...	EXPANSIN 16, expansin A16 (.1)		Lus10014406 [exp]	34.1	0.7022
AT3G14570		ATGSL4, ATGSL04	glucan synthase-like 4 (.1.2)		Lus10026188 [exp]	47.1	0.7001

Compare expression of checked genes

Lus10007501 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.