Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G05500 117 / 2e-33 MOP10 Pollen Ole e 1 allergen and extensin family protein (.1) AT3G09925 52 / 1e-08 Pollen Ole e 1 allergen and extensin family protein (.1) AT2G34700 44 / 1e-05 Pollen Ole e 1 allergen and extensin family protein (.1) AT2G47530 39 / 0.0009 Pollen Ole e 1 allergen and extensin family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017440 [exp] 295 / 2e-103 AT5G05500 128 / 7e-38 Pollen Ole e 1 allergen and extensin family protein (.1) Lus10040948 [exp] 163 / 2e-51 AT5G05500 176 / 9e-57 Pollen Ole e 1 allergen and extensin family protein (.1) Lus10009837 [exp] 159 / 1e-49 AT5G05500 171 / 1e-54 Pollen Ole e 1 allergen and extensin family protein (.1) Lus10015434 [exp] 59 / 1e-10 AT1G28290 135 / 1e-39 arabinogalactan protein 31 (.1.2) Lus10014013 [exp] 54 / 4e-09 AT2G34700 137 / 2e-40 Pollen Ole e 1 allergen and extensin family protein (.1) Lus10023887 [exp] 45 / 7e-06 AT3G09925 167 / 4e-53 Pollen Ole e 1 allergen and extensin family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G072000 [exp] 137 / 4e-41 AT5G05500 152 / 5e-47 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.010G185400 [exp] 133 / 7e-40 AT5G05500 166 / 8e-53 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.011G053600 [exp] 62 / 7e-12 AT2G34700 139 / 5e-41 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.004G044700 [exp] 56 / 8e-10 AT2G34700 142 / 8e-43 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.006G119100 [exp] 48 / 6e-07 AT3G09925 180 / 7e-58 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.017G145800 [exp] 44 / 3e-05 AT4G02270 118 / 5e-33 root hair specific 13 (.1) Potri.001G326200 [exp] 42 / 6e-05 AT5G41050 158 / 9e-50 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.014G126300 [exp] 40 / 0.0003 AT2G47540 114 / 1e-30 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.017G068400 [exp] 39 / 0.0004 AT5G41050 172 / 3e-55 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.014G126500 [exp] 40 / 0.0005 AT2G47540 113 / 6e-30 Pollen Ole e 1 allergen and extensin family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0287 [flax] [poplar] Transthyretin PF01190 [flax] [poplar] Pollen_Ole_e_1 Pollen protein Ole e 1 like
Representative CDS sequence Show only first row Show all	>Lus10007515 pacid=23176518 polypeptide=Lus10007515 locus=Lus10007515.g ID=Lus10007515.BGIv1.0 annot-version=v1.0 ATGGCAGCCAACAACAACCATCTGATCATAGCTTCAATTTGCTCTCTCATCCTCCTCACAATTACAGCCTTCCCAACATCATCATCAGCAACAACTGAAG AACATTATGTCCCGATTCCAAAACAGAACATCGTATCAGTCGTGGTAGTCGAAGGGGTCGTCTACTGCCAGAAATGCCAGAATCCTGGCTCCCTGACAGG TGCTACGCCGATCCCTTACGCCAAAGTCAACGTCAATTGTAGGAATTTGCGACACATGTTGACCTTCCAAAAGGTCTACACTGCGAACCAACACGGCTAC TTCTTCGCTCAGCTAGATGGCTTCAGGTTAGGCCACGGAATTTTCGACATCCCGCCTCTCCAAGCCTGCAATGTGAAGCTTGTTTCGTCTCCTCTCCGAT CCTGCAATGTCGCTACGGAGATTAACTCGGGACCTTACGGAGCTACGCTCCGGTCCGAGAACAAGGTGTACAAGTACCCTCCGTACGAGACTGTTATATA TGCGGCTGGTCCTCTGGCTTTCCGGCCTAGTAATTGTTACTGA
AA sequence Show only first row Show all	>Lus10007515 pacid=23176518 polypeptide=Lus10007515 locus=Lus10007515.g ID=Lus10007515.BGIv1.0 annot-version=v1.0 MAANNNHLIIASICSLILLTITAFPTSSSATTEEHYVPIPKQNIVSVVVVEGVVYCQKCQNPGSLTGATPIPYAKVNVNCRNLRHMLTFQKVYTANQHGY FFAQLDGFRLGHGIFDIPPLQACNVKLVSSPLRSCNVATEINSGPYGATLRSENKVYKYPPYETVIYAAGPLAFRPSNCY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G05500		MOP10	Pollen Ole e 1 allergen and ex...		Lus10007515 [exp]	0	1

Compare expression of checked genes

Lus10007515 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.