Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G45550 394 / 1e-141 MOB1-like MOB1-like, Mob1/phocein family protein (.1) AT4G19045 394 / 2e-141 Mob1/phocein family protein (.1) AT5G20440 248 / 9e-84 Mob1/phocein family protein (.1) AT5G20430 162 / 1e-51 Mob1/phocein family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012150 [exp] 421 / 3e-152 AT5G45550 399 / 2e-143 MOB1-like, Mob1/phocein family protein (.1) Lus10017172 [exp] 372 / 2e-132 AT5G45550 396 / 6e-142 MOB1-like, Mob1/phocein family protein (.1) Lus10021556 [exp] 369 / 7e-132 AT5G45550 394 / 1e-141 MOB1-like, Mob1/phocein family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G132700 [exp] 400 / 6e-144 AT4G19045 430 / 7e-156 Mob1/phocein family protein (.1) Potri.006G142500 [exp] 376 / 1e-134 AT5G45550 399 / 2e-143 MOB1-like, Mob1/phocein family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03637 [flax] [poplar] Mob1_phocein Mob1/phocein family
Representative CDS sequence Show only first row Show all	>Lus10007595 pacid=23148112 polypeptide=Lus10007595 locus=Lus10007595.g ID=Lus10007595.BGIv1.0 annot-version=v1.0 ATGGGTTTTGCAAACAGGAATCAAAAGACATTTCGTCCAAAGAAGAATGCTCCTTCTGGAAATAAGGGAGTGCAACTGAGAAAGCACATTGACTCAACCT TAGGCAGTGGGAATCTAAGAGAAGCAGTAAAGCTTCCTCCTGGAGAAGATGAAAATGAATGGCTTGCTGTCAACACTGTGGATTTCTTCAATCAAGTGAA TCTTCTCTTTAGCACACTCACGGAGTTCTGCACCCCTGAGAACTGTCCTACAATGTCTGCTGGCCCCAAGTACGAATACAGATGGGCAGATGGTGTGCAG ATAAAGAAGCCAATTGAAGTATCTGCACCAAAGTATGTAGACTACTTGATGGATTGGATTGAGTCACAGCTTGATGATCAGTCTATCTTCCCCCAAAAGC TCGGTGTCCCGTTCCCACCGAACTTCAAAGAGGTGACGAAGACCATATTCAAGAGGTTGTTCAGGGTGTATGCTCATGTGTACCATAACCACTTCCAAAG GATTGTTAGCCTTCAAGAGGAAGCCCACCTCAACACATGTTTCAAGCACTTCATTTTGTTCACTCATGAATTTGGGTTGATAGACAAAAGGGAGCTTGCA CCTCTTCAAGAACTCATAGAGTCCATTGTGGGTGCTTAG
AA sequence Show only first row Show all	>Lus10007595 pacid=23148112 polypeptide=Lus10007595 locus=Lus10007595.g ID=Lus10007595.BGIv1.0 annot-version=v1.0 MGFANRNQKTFRPKKNAPSGNKGVQLRKHIDSTLGSGNLREAVKLPPGEDENEWLAVNTVDFFNQVNLLFSTLTEFCTPENCPTMSAGPKYEYRWADGVQ IKKPIEVSAPKYVDYLMDWIESQLDDQSIFPQKLGVPFPPNFKEVTKTIFKRLFRVYAHVYHNHFQRIVSLQEEAHLNTCFKHFILFTHEFGLIDKRELA PLQELIESIVGA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G45550		MOB1-like	MOB1-like, Mob1/phocein family...		Lus10007595 [exp]	0	1
AT1G15520		ATABCG40, ABCG4...	Arabidopsis thaliana ATP-bindi...		Lus10041682 [exp]	1.7	0.8798
					Lus10021990 [exp]	2.4	0.8758
AT1G07645		ATDSI-1VOC	dessication-induced 1VOC super...		Lus10016574 [exp]	9.0	0.7172
AT5G16100			unknown protein		Lus10004035 [exp]	9.3	0.7027
AT5G33340		CDR1	CONSTITUTIVE DISEASE RESISTANC...		Lus10024903 [exp]	9.9	0.8264
AT1G28300	B3	LEC2	LEAFY COTYLEDON 2, AP2/B3-like...		Lus10014005 [exp]	12.0	0.7669
AT3G02960			Heavy metal transport/detoxifi...		Lus10015762 [exp]	13.4	0.7669
AT1G23980			RING/U-box superfamily protein...		Lus10022223 [exp]	13.6	0.6380
AT4G23160		CRK8	cysteine-rich RLK (RECEPTOR-li...		Lus10015094 [exp]	14.0	0.7102
AT5G05070			DHHC-type zinc finger family p...		Lus10027274 [exp]	14.7	0.7669

Compare expression of checked genes

Lus10007595 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.