Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36780 167 / 6e-46 UDP-Glycosyltransferase superfamily protein (.1) AT3G53160 156 / 5e-42 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT2G36750 153 / 1e-40 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36770 152 / 2e-40 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 150 / 4e-40 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G36800 151 / 5e-40 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36760 150 / 7e-40 UGT73C2 UDP-glucosyl transferase 73C2 (.1) AT4G34135 150 / 1e-39 UGT73B2 UDP-glucosyltransferase 73B2 (.1.2) AT2G15490 150 / 1e-39 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT5G12890 150 / 1e-39 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012148 [exp] 853 / 0 AT2G36780 169 / 1e-46 UDP-Glycosyltransferase superfamily protein (.1) Lus10019835 [exp] 162 / 4e-44 AT2G15480 476 / 3e-165 UDP-glucosyl transferase 73B5 (.1.2) Lus10014080 [exp] 151 / 2e-41 AT2G15480 330 / 3e-110 UDP-glucosyl transferase 73B5 (.1.2) Lus10005951 [exp] 151 / 4e-40 AT4G01070 510 / 5e-179 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10029453 [exp] 149 / 2e-39 AT4G01070 515 / 0.0 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10014086 [exp] 149 / 3e-39 AT2G15490 496 / 4e-173 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10008742 [exp] 148 / 3e-39 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10027739 [exp] 148 / 5e-39 AT2G36780 453 / 2e-156 UDP-Glycosyltransferase superfamily protein (.1) Lus10014437 [exp] 148 / 9e-39 AT2G36780 545 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G100500 [exp] 433 / 2e-147 AT2G36780 161 / 2e-43 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G133100 [exp] 224 / 5e-68 AT3G53160 159 / 2e-43 UDP-glucosyl transferase 73C7 (.1) Potri.001G016300 [exp] 162 / 5e-44 AT5G12890 543 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.012G048700 [exp] 159 / 4e-43 AT2G36800 550 / 0.0 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Potri.017G077500 [exp] 156 / 9e-42 AT5G12890 389 / 9e-131 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G077400 [exp] 154 / 7e-41 AT5G12890 381 / 1e-127 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G077800 [exp] 153 / 1e-40 AT5G12890 387 / 3e-130 UDP-Glycosyltransferase superfamily protein (.1) Potri.010G137000 [exp] 152 / 2e-40 AT5G03490 482 / 4e-168 UDP-Glycosyltransferase superfamily protein (.1) Potri.006G120600 [exp] 151 / 4e-40 AT3G53150 617 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.016G097400 [exp] 150 / 1e-39 AT3G53150 626 / 0.0 UDP-glucosyl transferase 73D1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10007597 pacid=23148119 polypeptide=Lus10007597 locus=Lus10007597.g ID=Lus10007597.BGIv1.0 annot-version=v1.0 ATGGCGAAGGTAAATTCCCCAATTAGCGCCGGAGAAGAAGAGATCTGGGTAATCACATTCCATGGACAAGGACACCTCCTCCCAACTTTCGAGCTCTGCT ACCAGTTCCTCTCCAGGAATCTCAGAACCACTCTCTTCATTTCCGCCGCCGTCTCCTCCTCCGTCCCACACTCCCTCGCCGCCGGCGATCTTTTCACAGT CATAGAATACCCGCCCCTCCCGCCTCCACCGCCGATGGAGGGGGATCGTCACTCGGACGACGGTTTCGATCGGCGCCGGCAGCTGGAGCAGGTCCAGATG TCGGAGTGTCTCCGGGCCAGAATTGCGACCCGTCGGGTCATGCCGATTTGTGCGATCGTCGATCATTTGATCTCGTGGGTGGGTTTGATTTTGGCCGAGA TGGCGATTCCTGCGGTTGGGTTTTTCACTTCTGGAGCTTGTTCGACGGCGATGGAGCACGCGTTGTGGAAGGCTGAGTTGGGGGATTCCGGTGTCGGCGC CGGCGAGACCCGGCTGCTTCCCGGGTTACCTGAGCATATGGCGGTTACGGAGTCGGATCTTAAGAGAAGGCCCTTTGGGCCGCATGGAGGCCCGCCGCAT GGAAGGCATGGCCCGCCTAGACAAGGATCCGGTTCGCTGCCACCGAGCCGGAGAGGAATGGGCCCGCCTAAACCCGGTGGGCTTCCACATTGGTTTCAAG ACATGGATGGGTTTAGCCAGTACCTTTATAACACGTGTGACGATCTGGAGGGTCCATTCATCGAATACCTCAATCATGTTTTCAAGAAACCGGTCCGAGC AGTGGGTCCATTGCTACCCGCTCAGTATTGGAAGGCTGCCGGCTCACTGCTTCGTGATCAGCAAGTAAGAGTGGAGCGCGAGTCAAGCATCAAGGAAGAT GAAGTCATCAAGTGGCTAGACTCGAAACCAATGGGTTCGGTTTTATACGTGTCATTCGGCAGCGAGGTTGGCCCAACACTAGAGGAGTACTCCAGACTAG CAAACGCGTTAGAAGCATCGAACAAGTCATTCATCTGGGCAATCCAACTCGCATCGAGCAAGAAATTCAGTCATGGGGACGGAAGTAACGGATTCTATCC TCATGGTCTCGACAAGAAGGTCGAGGGGAGAGGTCTAATCATCCACGGCTGGGCGCCTCAACTGCTTATTTTAAGCCACCCTTCCACTGGTGCATTCCTT TCGCACTGCGGGTGGAACTCGACCTTGGAGGCCATCATGCGCGGGGTGCCGATACTAGCATGGCCGATCAGAGGGGACCAATACCACAATGCAAAGCTGG TGGTCAAGCACTGGAGAGCCGGTACAATGGTGACCCATGACATGTCAAAGAGCATGGGCGAGGACGAGATTCGAGGTGGGGTAGAGACCATAATGAGGGA TGATGAAGTGAAGAAGAATGCATTAGCAATTTGTGCCAAGTTTGAAGATGGGTTTCCTGTGAGTTCTCAAGATGCCCTGAATGCTTTTAAGGATTCCATC TTGAATCTTCACAATTAA
AA sequence Show only first row Show all	>Lus10007597 pacid=23148119 polypeptide=Lus10007597 locus=Lus10007597.g ID=Lus10007597.BGIv1.0 annot-version=v1.0 MAKVNSPISAGEEEIWVITFHGQGHLLPTFELCYQFLSRNLRTTLFISAAVSSSVPHSLAAGDLFTVIEYPPLPPPPPMEGDRHSDDGFDRRRQLEQVQM SECLRARIATRRVMPICAIVDHLISWVGLILAEMAIPAVGFFTSGACSTAMEHALWKAELGDSGVGAGETRLLPGLPEHMAVTESDLKRRPFGPHGGPPH GRHGPPRQGSGSLPPSRRGMGPPKPGGLPHWFQDMDGFSQYLYNTCDDLEGPFIEYLNHVFKKPVRAVGPLLPAQYWKAAGSLLRDQQVRVERESSIKED EVIKWLDSKPMGSVLYVSFGSEVGPTLEEYSRLANALEASNKSFIWAIQLASSKKFSHGDGSNGFYPHGLDKKVEGRGLIIHGWAPQLLILSHPSTGAFL SHCGWNSTLEAIMRGVPILAWPIRGDQYHNAKLVVKHWRAGTMVTHDMSKSMGEDEIRGGVETIMRDDEVKKNALAICAKFEDGFPVSSQDALNAFKDSI LNLHN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36780			UDP-Glycosyltransferase superf...		Lus10007597 [exp]	0	1
AT1G77580			Plant protein of unknown funct...		Lus10012712 [exp]	2.0	0.8467
AT3G52850		VSR1;1, GFS1, B...	VACUOLAR SORTING RECEPTOR 1;1,...		Lus10025136 [exp]	5.4	0.8489
AT5G41350			RING/U-box superfamily protein...		Lus10024635 [exp]	9.6	0.8362
AT3G27880			Protein of unknown function (D...		Lus10014541 [exp]	11.4	0.8154
AT4G21540		SPHK1	sphingosine kinase 1 (.1.2.3)		Lus10011246 [exp]	11.6	0.8456
AT1G14870		AtPCR2, PCR2	PLANT CADMIUM RESISTANCE 2 (.1...		Lus10043325 [exp]	21.4	0.8196
AT2G29050		ATRBL1	RHOMBOID-like 1 (.1.2)		Lus10023789 [exp]	22.5	0.8356
AT4G19880			Glutathione S-transferase fami...		Lus10038348 [exp]	22.6	0.7421
AT3G21610			Acid phosphatase/vanadium-depe...		Lus10003670 [exp]	23.1	0.7145
AT2G22250		ATAAT, AAT, MEE...	MATERNAL EFFECT EMBRYO ARREST ...		Lus10023080 [exp]	23.5	0.7726

Compare expression of checked genes

Lus10007597 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.