Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G30910 436 / 7e-155 Molybdenum cofactor sulfurase family protein (.1) AT5G44720 409 / 1e-144 Molybdenum cofactor sulfurase family protein (.1.2) AT1G16540 116 / 8e-29 ACI2, ABA3, SIR3, LOS5, ATABA3 SIRTINOL RESISTANT 3, LOW OSMOTIC STRESS 5, ALTERED CHLOROPLAST IMPORT 2, ABA DEFICIENT 3, molybdenum cofactor sulfurase (LOS5) (ABA3) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018692 [exp] 623 / 0 AT1G30910 432 / 2e-153 Molybdenum cofactor sulfurase family protein (.1) Lus10031190 [exp] 112 / 2e-27 AT1G16540 1012 / 0.0 SIRTINOL RESISTANT 3, LOW OSMOTIC STRESS 5, ALTERED CHLOROPLAST IMPORT 2, ABA DEFICIENT 3, molybdenum cofactor sulfurase (LOS5) (ABA3) (.1) Lus10031768 [exp] 111 / 6e-27 AT1G16540 1021 / 0.0 SIRTINOL RESISTANT 3, LOW OSMOTIC STRESS 5, ALTERED CHLOROPLAST IMPORT 2, ABA DEFICIENT 3, molybdenum cofactor sulfurase (LOS5) (ABA3) (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G154900 [exp] 370 / 4e-129 AT1G30910 332 / 3e-114 Molybdenum cofactor sulfurase family protein (.1) Potri.007G066400 [exp] 107 / 2e-25 AT1G16540 1071 / 0.0 SIRTINOL RESISTANT 3, LOW OSMOTIC STRESS 5, ALTERED CHLOROPLAST IMPORT 2, ABA DEFICIENT 3, molybdenum cofactor sulfurase (LOS5) (ABA3) (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03473 [flax] [poplar] MOSC MOSC domain PF03476 [flax] [poplar] MOSC_N MOSC N-terminal beta barrel domain
Representative CDS sequence Show only first row Show all	>Lus10007754 pacid=23149248 polypeptide=Lus10007754 locus=Lus10007754.g ID=Lus10007754.BGIv1.0 annot-version=v1.0 ATGGCGGAGAAGGAGGGATCAGTTACTGCTGCAACTGTGTCTTCCATTTTCATCTATCCGATCAAATCATGCCGCGGTATCTCCGTTCCTCACGCCCCAC TCACTCCTACTGGGTTTCGTTGGGATCGGAATTGGCTGGTGGTTAACTCCAAAGGGAGGGCATACACTCAAAGGGTTGAGCCTAAGCTTGCTCTCGTTGA GATACAGCTACCCGATGAAGCATTCATCGATGGCCGGGAACCTACCAAAAACTCCTTTATGGTTATAAAAGCTCCTGGGATGGATACCCTTCAGATTCCG CTGACGAAACCGCAAGATGTGGCAGAGGGAGTATCAGTATGGGAGTGGTCTGGTTCTGCACTTGATGAGGGAGCTGAACCAGCTAAATGGTTCTCTGATT ACATTGGGAAACCCAGTCGCCTTGTTCGTTTCGATGCAGGATCAGAAGTGAGGCCTGTGGATCCCGAGTATGGTCCCGGGCATAATATTATGTTTTCTGA CCTCTTTCCCTACATGGTTGCATCTCAGGAGTCTCTGGATGCACTTAATAAGCTTCTCACTGAACCTGTTCCTATTAATCGTTTTCGACCCAACATACTG GTTAATGGATGCGAACCTTTCTCAGAGGACTTATGGACTGAGATTAGGATAAACAAGTCAACATTTGGAGGTGTAAGGCTGTGCTCCCGCTGCAAGATAC CAACAATTAATCAGGACACTGGTGTTGCTGGGTCCGAGCCAAATGCAACCCTGATGCAGTTCAGATCTGATAAAGTTCTGCGTCCAGACAAGAAACAGCA AGGGAAGGTTTACTTCGGCCAGAACTTAGTCTGGAAGGATAACGATTCAGGGGCAGGGAAAGGAAATGTTATTAAAGTAGGAGATCCTGTTGTTGTACTC CAAAAGGTCTCCTCTTCTGCTGAAGCTGCAGCGTGA
AA sequence Show only first row Show all	>Lus10007754 pacid=23149248 polypeptide=Lus10007754 locus=Lus10007754.g ID=Lus10007754.BGIv1.0 annot-version=v1.0 MAEKEGSVTAATVSSIFIYPIKSCRGISVPHAPLTPTGFRWDRNWLVVNSKGRAYTQRVEPKLALVEIQLPDEAFIDGREPTKNSFMVIKAPGMDTLQIP LTKPQDVAEGVSVWEWSGSALDEGAEPAKWFSDYIGKPSRLVRFDAGSEVRPVDPEYGPGHNIMFSDLFPYMVASQESLDALNKLLTEPVPINRFRPNIL VNGCEPFSEDLWTEIRINKSTFGGVRLCSRCKIPTINQDTGVAGSEPNATLMQFRSDKVLRPDKKQQGKVYFGQNLVWKDNDSGAGKGNVIKVGDPVVVL QKVSSSAEAAA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G30910			Molybdenum cofactor sulfurase ...		Lus10007754 [exp]	0	1
AT3G47860		CHL	chloroplastic lipocalin (.1)		Lus10035734 [exp]	1.4	0.8663
AT1G30910			Molybdenum cofactor sulfurase ...		Lus10018692 [exp]	1.7	0.8593
AT3G17020			Adenine nucleotide alpha hydro...		Lus10037761 [exp]	5.3	0.8643
AT4G22250			RING/U-box superfamily protein...		Lus10035335 [exp]	6.0	0.8463
AT1G64620	DOF	AtDof1,8	Dof-type zinc finger DNA-bindi...		Lus10023032 [exp]	7.1	0.8444
AT3G07190			B-cell receptor-associated pro...		Lus10038188 [exp]	7.5	0.8300
AT1G22400		ATUGT85A1, UGT8...	ARABIDOPSIS THALIANA UDP-GLUCO...		Lus10007421 [exp]	10.2	0.8293
AT5G15210	ZF_HD	ATHB30, ZFHD3, ...	ZINC FINGER HOMEODOMAIN 8, ZIN...		Lus10030679 [exp]	11.7	0.8306
AT1G05070			Protein of unknown function (D...		Lus10020038 [exp]	12.7	0.8095
AT4G38430		ATROPGEF1, ROPG...	rho guanyl-nucleotide exchange...		Lus10021234 [exp]	13.0	0.8232

Compare expression of checked genes

Lus10007754 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.