Lus10007793 [FLAX]

| External link |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | |||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||
|
Poplar homologues |
|
||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info |
| ||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Lus10007793 pacid=23143606 polypeptide=Lus10007793 locus=Lus10007793.g ID=Lus10007793.BGIv1.0 annot-version=v1.0
ATGGATTATGATGACAATGATTTTCAAAGCCAGAATCTTCATTTAGCCGGTGAAGGGAGCAACAAATTTCCTCCTGTCATAAACCCATATGCTCTTCCTA
AGTTTGAGTTTGACGACAATATTCATGTACCATTACGTTACGATAGCCTAGTTGAAACTGAGGTTTTTCTTGGCATTGAAAACAACGAAGATAGCCAGTG
GATTGAGGATTATTCTCGGGGTAGCAATACAATACAATTTGGTTCAAGTGCAGCAGAGTCTTGCTGCATTTTGAGACAGAACAATGTTTGGTCTGAGGCA
ACTTCCTCAGAATCTGTTGAGATGCTGTTAAGATCTGTCGGTAACGAAGAAAGCTTTCCGTTACAAGCTAGTGCTAAGAAGTCAGATGCATGTGATGAGC
TGGGCTGCATGATTAACCAGATGGAACCTAGCTCAAATCAGGATAGTAATTTACCTATTAGGCCAGTAGATTTTGCAGATGTGCAGCAGACTTTACAATC
TGCTGATATTGCTGAGAGATTCCCCACATTAAATGCCGAGGCTGGGGCCCAGCAGCCTCTGGATCAGGGTGTTTCAGAGGGTCATGATGGTAACAACTGT
TTTGAAAATGGATTAGGTGATTTAACTGCTGTTGCGGCAGGCGCTGAGTTTTCTGTTGCAGTGGAGAACGAATTTATTGACGGTAAATGTGATAGTGTCG
GCCAAAGTGCTGGTAATACTGTTATTTATGAATCTTTAGCTATAAGGACAGTAGAAACTGTTGGTTCAGAGGTGCAAGTTGTTGACATAGTGGATACTGA
AGATATCGGCATTAGCAATATAAGGGCTGAGAATGAAGATGTCTTGAATCAGACCACGAATCCAGGCGATGGGATAAAACATACAGTAGAAATTGACACT
GATGACTATAAAGAAGAAAGAGATGTATTGAACGAAGCTGAAATTGGTGTATCCCAAGAAATTTCAGATGCAACCATGGTTGAAACTGGTATTAAAGAGT
TGCAGAGTCCTGCCTGTTCTGCCCCTGTCGAAAATGCAAGTGAAGCAAATATAAGTGGTAGTAACTTGAGCAATATGGAAGGACCTTATACCTTCAGAAC
AGAGACAGACTTGTCTGAGAACCTAGAGTCTACTGATGTATCTAGAGGAAGTGAAAGTATACTATTAGTACATGTTGATAATAGGGCGCAGGATGGGAGT
GGCAGCGTTTGCCCCTCGCTGACAGATAGTTTTGTCACAAGCTCTGAGGTACTTCCGACATCCGAGGAGAAAGATCCTTCTGCTGATGGAAATGAAAGCA
TTGATGTCTCTCATGCTCATGATAGTTCTGATTATAATATTCTTGCTACAAAAGCTTGCAAGGGTATTCCGCCATCCTTTCCAGCTGAATCTCCGCGAGG
GCATGAGAGAGAAATAGTCTCTCAACAGGCTGAATCTCCGCATGGGCATGAGAGAGAAATAGTCCCTCAAGAGGCTGAATCTCCGCTAGGGCATGAGAGA
GAAACAGTCCCTCGAGAGGCTGAATCTCCGCAAGGGCATGAGAGAGAAATAGCCCCTCAAGAGGATGAAGATCGTGGATTAAGACTGGATGGTCTTGTTC
AGCAAAATGAAGGGTCAGAGTCGCCTTCTAATGGTGCTACTGTCAACAATGAGGTTCATAACTCTCTTATAACTGATGGGAACATTGGGACCTTGCCTTC
AGTTGGTGTAGACGACAAGGTAATGGCTGCAGAATACTCTGTTGATCTGGCTGCTGGCGATGCTACAGCGAGGACTGTTGATCCTAGCATTGTCAAAGTC
TCCACCGTATCAGCTTTGGGCTCTGCTCAAATATCAGAAGAAGAGGGCAGAGATATTCCAATCTCAGGGTTATCTGAAGGAACATCAGCTATTGTAGGCT
GTGTCTTAGAATTGGAAAAGGGTGTTTCTGGAGCATCTGGAGAAGGTTTAAATTCAAATGTGGATGAGTCTTTATCAATGGTTGATGAGTGTAGTCAAAA
AGACCATATTGATTCTGCAGCAGTCTCTATGAATGAAGATGTTCTAGAATCTTCAAAGGAAACCGAAGAATGCTCGATTCCTCCGACCTCTTTGCAGAAG
GAAGACAATGCTGTAATTGTTGAAGAAACGGAGGAGAAGGCTTCATTGAAAGATCAAGATAACGTTTCAAAGCAGGATGCTAGTCAGAAGGGGCGTGTGG
AAGATGAAGCTGCCCTAGCCATTGATACTAATGACAAACGGGATTCTATGACAGACAGAAGTGATAATGTTTCAAAGCAGGATGCTAGTCAGAAGGGGCA
TGTGGAAGATGAAGCTGTCCTAGCCATTGATACTAATGACAAACAGGATTCTATGACAGACAGAAGTGAATGTGAGACAACTGTTGCTGATCTGGAGAAG
CAATCTGTTGCTTCGTCTGTAGTCATACCAACTACTGAACTCTCTGAAGCTCATCCGACGGAGGAAATCAATAGATATCCACATTTTACTCCTTCAACTC
CAGTTGATGCCGACAAGTCTTTCTCTCATGATTCAAAGAAGGGTACACCCTCAAAAGATGATGGTAGCTTCACTTTTCAGGTCACCCCTTTGACAGAGTC
ACCACAAGTGGAAACTAGGATGAAATTGCAGCTCATGCAGACTGTGGAGCCCAGTAAAGTATCTATGGCAATGGATGTTTCTCCTTCTACAGCTGGTTTA
AGCCAATTGACAGAGTTGCCACAAGTGGAGAACACCAATAAGTTGCAGCTCTTGCACACAGTTGAACTCAGCAAAGTATCCCTGCCTATGGATGCTTCTC
CATCGATGCCTGTTTTAGGCCAATTAGATGGAAAAATTGTGCAAGATATCTCACATCAGAGTCCAAAGGTTTCTGATGTAACCATTCATCAAGTTGGTGC
AAAAGGAAATTCTGAGCGTAAGCCCAGACGAAGGGTAACTCCAAAAGAGTCTGCTAAGAGGGTAAAGACACCAAAGGAGATAACACCTGCAAAGATGGAA
AGGGGTAACAAAGCAATTATTACACCGAGTTCATCAGTAGTTGCTGAACGTGCACAGTCAAATGAGATTCAGCGATATGGGCCTCTTGTTGGGACATCGA
TGGCTGGTTTGCCAGATTTGAATTCTTCAGTCTCTTCCATGGTGGTGTTTCAACAACCTTTCACGGATATGCAACAAGTTCAATTACGTGCTCAAATCTT
CGCATATGGAGCTTTGATTCAAGGAACCGCCCCGGAGGAGGCATATATGATATCTGCATTTGGAGGGCCTGATGGTGGTAAGAGCGCTTGGGAGAAACCA
TGGCGTTTGTTTGTAGAAAGACTTAATGGTCACATAACCCATCTCAACACCCCGGGGACCCCGGTGCAGTCTTTCTCTGGTGCTAGAGTTCCAGTTCCAG
ATCAAAGTAGTAAGCAAAGCACACGTAAAGTTAAGGCCGGGTCCTCTACCGGTGCTAGATCCAGCAGCAGGGCAATAACGCCAATTACAAGTCCCACACT
ACCTCTTTCGACACCGCTTTGGAATGTCTCAACTCCTTCGGATCACATGCAAGCAAGTTCCATAGCAAGGAGTCCTGTTCTGGACTTCCAGAGGACACTT
TCTCCATTGCCGTCTCATCAGCCCCCAGCCATGAGGAATTTGGTTGCACATAATTCTTGGATGTCTCAGGGTCATTTTGGTCCCTGGATGACTTCGCCAC
AAACCTCTGCAGTCGATACTGGCAGTCGTTTTACCGTACAAATGCCTCATACAGAGCCCCTTCACTTGACTCCCGTAAAAGACTCATCTTTGCCTCTCCC
CTCTGCTATGAAGCATGTTTCTACTCCACTCGTGACTTATACAGATCCATCAGGCAACTTGTTAGGCAATACTTCCATGCCTGAGGTTAGCAAGATGGTA
ATAGCATCCGGTCAACAGTCCACCATTCCGAAGCCTAGAAAAAGGAAGAAGTCGTCTGTGCCAGAGAATACAGTTAACTTGAGTTTACTCCACCAGCCTT
CACAAGAATTCGTTCCTTCTGTTGCCATCACAACCCCCGTCAGCTTCCCCGCGGGAGAGAAAAATATATCTTTGGAGGTGGGGGGGATAGCTCTGGCTTC
TGCCGTGGAAAAAGCCGCAGCTGCAGCTGCTAAAGTTGCGGCGGATGCCGCATTGCAAGCTCGGCTAATGGCAGATGAGGCGGTTCAGACCTCTGTAATC
TCTTTCTCAGATGAGATGAAGGACTTGGGAAATGCAACACCAGCTACGATATTGAGACGTGACAACGGAACCAGCAGTTCCAGTTCGATCATTCTCGCTG
CGAGAGAAACAGCAAGAAAAAGGGTTGAAGCAGCCTCTGCTGCCTCGAAACGAGCTGAAAATATGGATGCCATTATTAGAGCCGCGGAGCTTGCTGCAGA
AGCTGTTTCTCAAGCTGGAAAGATTGTAGCTATGGGCGATCCTTTGCCCTTGAGTGTGCTAGCCTCAACCGGTCCAGAGGGCTACTGGAAAGATCCCCAA
GTGTCTCCCCAGCGTGTCAGTAAAGCCAATGAGCTCATCACTGTCAATTTGGATGTTCCTAGTAGAGGAAGAGACGTTCCTGGTGATTCTTCTAGAAGTA
GGGCCAAGGAAGGCTTGTCTAGCAGCCAAACTGGGATGCCAGGTGGCAAGGAAGCCAAAGAACTCAAAGGTCCTAAATATTCAGAGACAACCTTGGAAGT
GGTTCTTCTGGATGATGGGAATGGATCGAAACCTCCAACCACTTCAGAGACTGAAAATATAGAAGCTGTTGGGAGTTCAAAAGAAAGCGTCATCAAAGAA
GGAAGCAGTGTAGAGATCTTGAGGGATGGAAATGGATTCAAAGCGGCCTGGTTTTCAGCAAAAGTATTGACTCTGCGGGATGACTTGGCTTATGTGAGCT
ATGATGAACTTACATCAGGGGAAGGTTCAGAGAAGTTAACAGAGTGGGTAGCCCTTCGAGGCGAAGGAGCAGAGGCACCAAAAATACGCATTTCTCGCCC
TGTTATTGCCCTGCCATATGAAGGAACTAGGAAGAGGCGGAGGGCTGCCGTAAATGACTATAACTGGTCGGTCGGCGACCGAGTGGATGCATGGTTAAGG
GAAAGTTGGTGGGAGGGAGTTGTCACAGAAAAGAACAAGAAGGATGATACCCACTTGACGGTTTATTTTCCAGTACAAGGAGAAACATCGGTAGTAAGAG
CGTGGCATCTTCGTCCTTCTCTTCTATGGAAAGATGGGGAATGGATGGAATGGTCGAATTTACAGCAGAAGAATGTCTCGTTTAATACGGGAGATACGCC
GAAACAGAAACGGCCCAGAATGCAGAGCCCTGTAGTAGAATCCAAAGACGAGGACAAGGTGTCTGAAAATCCGATTGTCAAAGAGTCTGGTAAACACGAC
GAGTCAACGTTGCTGAATTTGGCAGCTGGTGAGGCGGTATTCAACGTTGGTAAGGCTACTGGAGATGGAAGTAGAACGGCTCGAACTGGTTTGCAGAAGG
AAGGATCGAAGGTCGTCTTTGGGGTACCAAAGCCGGGAAAGAAACGGAAGTTCATGGAAGTGAGCAAACATTACGTTGCTGGCCGAATCGATAGGACGAA
CGAAGCAAACGATCCAGCGAAATCTGCAAAATATTCGACGTCTCAAGTATCAGGTCCTCGGGGATGGAGAAGTACACCGAAAACAGACACTGCGGCCGAG
AAACGAACAACAGCAGCGTTTGCTGCACCCAAGTCCAAGCTTCCCAAGCCCGGTAATCGACCTCATCCTTCTGGTAGGACATTTCCGCAGAAGGAGACCT
CGTCAAACAGCAGCGGTGGTCCTGCATTTACAGACAATAGTGTGAAGGCTAAAACCGGTGGAGGAGCTTCTTCAAACACACTTGAGAAAGAGAGTTCGAT
GGACCGTTCCTTCTCCAGCTCCGGGGAAGCAACAGACCCTCCTCCGATTGTATTTTCTGCAGTTGCTCGACGATCAGATGCCATCCCCTCTAAGAAACTG
TCGACGACAAATGCAAGAAGCGTAAGGGGTAACAAGGGAAAATTCGCTCCTGCTGCAGGCAGATTGGGCAAAGTTGAAGAGGGCAAAGTCTTCAGCAGCG
CTGCTTCTTCCACTTCAGGACAGTCTTCCTCGGCCAATGAGCCTCGTAGGTCCGTTCGTCGAATCCAGCCAACTTCAAGACTACTGGAAGGGCTGCAGAG
CTCGTTGATGGTCTCGAAAATACCGTACTCCGTCTCTCACGATAAGAGCCACAAGAGTAGGCCGGCCTTTAGAGGTAAGCACATTCAATGCGCTATCCAC
ATCGCAGTCTCTACTGTTCTTTTGCTTCCTCCGAACTGA
|
||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Lus10007793 pacid=23143606 polypeptide=Lus10007793 locus=Lus10007793.g ID=Lus10007793.BGIv1.0 annot-version=v1.0
MDYDDNDFQSQNLHLAGEGSNKFPPVINPYALPKFEFDDNIHVPLRYDSLVETEVFLGIENNEDSQWIEDYSRGSNTIQFGSSAAESCCILRQNNVWSEA
TSSESVEMLLRSVGNEESFPLQASAKKSDACDELGCMINQMEPSSNQDSNLPIRPVDFADVQQTLQSADIAERFPTLNAEAGAQQPLDQGVSEGHDGNNC
FENGLGDLTAVAAGAEFSVAVENEFIDGKCDSVGQSAGNTVIYESLAIRTVETVGSEVQVVDIVDTEDIGISNIRAENEDVLNQTTNPGDGIKHTVEIDT
DDYKEERDVLNEAEIGVSQEISDATMVETGIKELQSPACSAPVENASEANISGSNLSNMEGPYTFRTETDLSENLESTDVSRGSESILLVHVDNRAQDGS
GSVCPSLTDSFVTSSEVLPTSEEKDPSADGNESIDVSHAHDSSDYNILATKACKGIPPSFPAESPRGHEREIVSQQAESPHGHEREIVPQEAESPLGHER
ETVPREAESPQGHEREIAPQEDEDRGLRLDGLVQQNEGSESPSNGATVNNEVHNSLITDGNIGTLPSVGVDDKVMAAEYSVDLAAGDATARTVDPSIVKV
STVSALGSAQISEEEGRDIPISGLSEGTSAIVGCVLELEKGVSGASGEGLNSNVDESLSMVDECSQKDHIDSAAVSMNEDVLESSKETEECSIPPTSLQK
EDNAVIVEETEEKASLKDQDNVSKQDASQKGRVEDEAALAIDTNDKRDSMTDRSDNVSKQDASQKGHVEDEAVLAIDTNDKQDSMTDRSECETTVADLEK
QSVASSVVIPTTELSEAHPTEEINRYPHFTPSTPVDADKSFSHDSKKGTPSKDDGSFTFQVTPLTESPQVETRMKLQLMQTVEPSKVSMAMDVSPSTAGL
SQLTELPQVENTNKLQLLHTVELSKVSLPMDASPSMPVLGQLDGKIVQDISHQSPKVSDVTIHQVGAKGNSERKPRRRVTPKESAKRVKTPKEITPAKME
RGNKAIITPSSSVVAERAQSNEIQRYGPLVGTSMAGLPDLNSSVSSMVVFQQPFTDMQQVQLRAQIFAYGALIQGTAPEEAYMISAFGGPDGGKSAWEKP
WRLFVERLNGHITHLNTPGTPVQSFSGARVPVPDQSSKQSTRKVKAGSSTGARSSSRAITPITSPTLPLSTPLWNVSTPSDHMQASSIARSPVLDFQRTL
SPLPSHQPPAMRNLVAHNSWMSQGHFGPWMTSPQTSAVDTGSRFTVQMPHTEPLHLTPVKDSSLPLPSAMKHVSTPLVTYTDPSGNLLGNTSMPEVSKMV
IASGQQSTIPKPRKRKKSSVPENTVNLSLLHQPSQEFVPSVAITTPVSFPAGEKNISLEVGGIALASAVEKAAAAAAKVAADAALQARLMADEAVQTSVI
SFSDEMKDLGNATPATILRRDNGTSSSSSIILAARETARKRVEAASAASKRAENMDAIIRAAELAAEAVSQAGKIVAMGDPLPLSVLASTGPEGYWKDPQ
VSPQRVSKANELITVNLDVPSRGRDVPGDSSRSRAKEGLSSSQTGMPGGKEAKELKGPKYSETTLEVVLLDDGNGSKPPTTSETENIEAVGSSKESVIKE
GSSVEILRDGNGFKAAWFSAKVLTLRDDLAYVSYDELTSGEGSEKLTEWVALRGEGAEAPKIRISRPVIALPYEGTRKRRRAAVNDYNWSVGDRVDAWLR
ESWWEGVVTEKNKKDDTHLTVYFPVQGETSVVRAWHLRPSLLWKDGEWMEWSNLQQKNVSFNTGDTPKQKRPRMQSPVVESKDEDKVSENPIVKESGKHD
ESTLLNLAAGEAVFNVGKATGDGSRTARTGLQKEGSKVVFGVPKPGKKRKFMEVSKHYVAGRIDRTNEANDPAKSAKYSTSQVSGPRGWRSTPKTDTAAE
KRTTAAFAAPKSKLPKPGNRPHPSGRTFPQKETSSNSSGGPAFTDNSVKAKTGGGASSNTLEKESSMDRSFSSSGEATDPPPIVFSAVARRSDAIPSKKL
STTNARSVRGNKGKFAPAAGRLGKVEEGKVFSSAASSTSGQSSSANEPRRSVRRIQPTSRLLEGLQSSLMVSKIPYSVSHDKSHKSRPAFRGKHIQCAIH
IAVSTVLLLPPN
|
DESeq2's median of ratios [FLAX]
Coexpressed genes
Lus10007793 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.