Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G17860 166 / 1e-51 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73260 119 / 3e-33 ATKTI1 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) AT1G73325 100 / 7e-26 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73330 74 / 5e-16 ATDR4 drought-repressed 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007902 [exp] 423 / 1e-152 AT1G17860 162 / 3e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007892 [exp] 423 / 2e-152 AT1G17860 163 / 1e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10030354 [exp] 412 / 3e-148 AT1G17860 160 / 1e-49 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007889 [exp] 392 / 3e-140 AT1G17860 163 / 1e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039163 [exp] 388 / 1e-138 AT1G17860 167 / 4e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013770 [exp] 387 / 1e-138 AT1G17860 166 / 6e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10030355 [exp] 256 / 2e-86 AT1G17860 149 / 5e-45 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039210 [exp] 251 / 1e-84 AT1G17860 179 / 4e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013730 [exp] 249 / 4e-84 AT1G17860 175 / 2e-55 Kunitz family trypsin and protease inhibitor protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G153400 [exp] 213 / 8e-70 AT1G17860 223 / 1e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153466 [exp] 212 / 1e-69 AT1G17860 222 / 4e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153600 [exp] 207 / 1e-67 AT1G17860 217 / 3e-72 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067900 [exp] 193 / 4e-62 AT1G17860 183 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067600 [exp] 187 / 1e-59 AT1G17860 196 / 9e-64 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153200 [exp] 179 / 1e-56 AT1G17860 191 / 5e-62 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067800 [exp] 152 / 5e-46 AT1G17860 137 / 8e-41 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G006900 [exp] 88 / 3e-21 AT1G73260 79 / 6e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.001G309900 [exp] 87 / 4e-21 AT1G17860 90 / 2e-22 Kunitz family trypsin and protease inhibitor protein (.1) Potri.007G111800 [exp] 84 / 1e-19 AT1G73260 79 / 3e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0066 [flax] [poplar] Trefoil PF00197 [flax] [poplar] Kunitz_legume Trypsin and protease inhibitor
Representative CDS sequence Show only first row Show all	>Lus10007890 pacid=23143196 polypeptide=Lus10007890 locus=Lus10007890.g ID=Lus10007890.BGIv1.0 annot-version=v1.0 ATGATGATCATGAAGACCACAGCAGCAACAACAGCAAATGCAATGCTGGTAATGGCCTTATTCGTTATCACTCTCTCTTCCGCCTACGCTGCTAGATCTC TTGCCGAAACCCTAGCCACTTCATCCCTAACCCCACTTCCTGTCCTTGACGTGGACGGGAAAGTGGTCCGGTCAGGGACCACTTACTACATCCTCCCTGC AACTAGCGGGGAAGGCGGTGGTGTTGCCCTAGCCAGCATGACCAAGGACCCCGAGAGCTGCCCGCAGACTGTGGTCCAAGACGAGGACGAGATTTCCCAA GGTCTCTCTCTCACATTCGCCCCGGTCAATACCAAGTCGGGTTACACAGTTCGCACGTTCACGGACCTCAATGTCAAGTTCTCTGCTGACACTGCCTGCG AAGAAGGGACCGTGTGGAAGGTCGATGACTTCAATGATGATGTCGAGCAGTGGTTTGTAGGCACCGGTGGGGTTGAAGGGAACCCTGGGCCGAGAACCGT GAAGAATTGGTTCAAGATTTGGAAGTACGGTTCAAACTATAAGTTGTCGTACTGTCCGGCGGTATGCAAGTCGTGCAAAGTCGATTGCAAGGATGTCGGA ATTTACGTGGACGAGAATGGAGGAAGGAGGTTGGCTTTGGTTGACAAGGAAGCTGACCCTTTTGTGGTGAAGTTCGTCAAGGCAACTTGA
AA sequence Show only first row Show all	>Lus10007890 pacid=23143196 polypeptide=Lus10007890 locus=Lus10007890.g ID=Lus10007890.BGIv1.0 annot-version=v1.0 MMIMKTTAATTANAMLVMALFVITLSSAYAARSLAETLATSSLTPLPVLDVDGKVVRSGTTYYILPATSGEGGGVALASMTKDPESCPQTVVQDEDEISQ GLSLTFAPVNTKSGYTVRTFTDLNVKFSADTACEEGTVWKVDDFNDDVEQWFVGTGGVEGNPGPRTVKNWFKIWKYGSNYKLSYCPAVCKSCKVDCKDVG IYVDENGGRRLALVDKEADPFVVKFVKAT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G17860			Kunitz family trypsin and prot...		Lus10007890 [exp]	0	1
AT1G17860			Kunitz family trypsin and prot...		Lus10022302 [exp]	2.2	0.9879
AT1G17860			Kunitz family trypsin and prot...		Lus10007902 [exp]	4.5	0.9834
AT1G17860			Kunitz family trypsin and prot...		Lus10013770 [exp]	4.9	0.9749
AT1G17860			Kunitz family trypsin and prot...		Lus10007892 [exp]	5.2	0.9805
AT1G17860			Kunitz family trypsin and prot...		Lus10039209 [exp]	5.7	0.9710
					Lus10032975 [exp]	6.0	0.9484
AT1G17860			Kunitz family trypsin and prot...		Lus10039210 [exp]	6.3	0.9783
AT1G17860			Kunitz family trypsin and prot...		Lus10042301 [exp]	8.4	0.9771
AT5G62350			Plant invertase/pectin methyle...		Lus10031133 [exp]	8.7	0.9369
AT3G15980			Coatomer, beta' subunit (.1.2....		Lus10002324 [exp]	8.8	0.9526

Compare expression of checked genes

Lus10007890 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.