Plant FIBer expression Database

Lus10007951 [FLAX]


External link
JGI Phytozome v13
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT1G57600 736 / 0 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10013485
[exp]
988 / 0 AT1G57600 748 / 0.0 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Poplar homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.013G000600
[exp]
822 / 0 AT1G57600 740 / 0.0 MBOAT (membrane bound O-acyl transferase) family protein (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0517 MBOAT-like PF03062 MBOAT MBOAT, membrane-bound O-acyltransferase family
Representative CDS sequence
>Lus10007951 pacid=23162277 polypeptide=Lus10007951 locus=Lus10007951.g ID=Lus10007951.BGIv1.0 annot-version=v1.0
ATGCAACCGAAAGCAGATATTAGAATGACTGGCAGAGTGGGGTGGAGAAGGAGAGAGCTTGCTTTCCTGCTTCTCTATGCTATTGCTTTCTACGTTTACA
TCATCCATAGATCTATTCAACTCGCTCAGGAACACAAGTCAAAGCTTTATGGCTTACGCCCTGGCTGGCTATTTCTTCCTCGTCTAAATGATCTCTCTGA
TGCACAATGGAGAAATTTTCGTGGAAATCTACCAATTCTGACTGCTGTTTTTGCAATTTTTGCTGTCCTAGCCAATACATTGAAGGCCTTTATGTATTTA
AGAGCTAAGGGAATGTCGATTACCTGGCTTTTGATTTCTTTGGCCTACTTATCATACCTTCATGGGGCGTGCACCTTACATATCTTATTAATAGCTTCTG
CGAATTTTATTATTGTAATGATGTTTGCACGAACAAAGTACTTCTCACCTGCCATTTGGATATTCAACCTATCTGTTCTTCTTTCTAACCGACTTTACGA
GGGGTATCCATTCTCCATGTTTGGGGAACAGTGGGCATACTTAGATAACTTCCGAGGCACGTTCAGATGGCATATTTGCTTTAACTTTGTTATTTTGCGC
ATGATCAGCTTTGGATATGACTATCATTGGGCTAATCAAGAGTCTCGTTTTGATCAGGAGAAGCACATTCAGCGTTGCCATAGTTGTAAGTCAGGAACAA
TGTGCTACCAATTGCTACAGGAGAGAAGTGTGCAAATTGACAAGTTTTCCTTTACCGTATACTTGTCTTATTTGGTGTATGCCCCCCTTTACCTTGCTGG
GCCAATTGTAAGCTTCAACGCCTTTGCTTCACAGTTAGACATGCCAGTACGAATTTTTGCAATCAGAAATGTCTTCTGGTATGGATTACGGTGGATATTC
AGCTTCATTATCATAGAAGTCGCCACCCATTTTTTCCATTACAATGCCTTTGCAGTCAGTGGCATCTGGAAGCTGCTGTCACCTATGGATATTTTCATCA
TTGGATATGGGGTCTTGAACTTTATGTGGCTGAAGTTTTCCCTCATATGGCGCTATTTTCGGCTTTGGTCACTGATTAATGGCATAGAGGCTCCTGAGAA
TATGCCCAAGTGCATCAATAATTGCTATAACTTGGAGAGCTTTTGGAAAAATTGGCATGCTTCTTTTAATAGATGGCTCGTGAGGTACATGTATATTCCT
CTTGGTGGATCTGGGAGGAAGTTGCTCAATGTCTGGGTAATATTCACGTTCGTAGCTATTTGGCATGATCTGGAATGGAAACTCCTGTCATGGGCATGGT
TAACATGTTTATTCTTCATCCCAGAAATGCTGGTCAAGTCAGCCATGACTAAGTTACAGGCCGAGAGTTCTTTCGGAGAGCTCCTCTTCCGAGAACTTAG
TGCAGTCGCTGGCGCAATCACTATTACATGTCTCATGGTAGCAAACCTCGTCGGATATGTCATCGGGCCATCTGGGATTAACTGGTTGATGTCCAAATTC
CTAACAAGAGAAGGACTACCGGTGCTTGGTGTTATGATGGTATCGTTCTACGTAGGTGTTAAGTTGATGTTCCACATTGATGATGCCAAACCAAAGCGTC
AGTACCAAAGGCACAGGGAGAGCTAG
AA sequence
>Lus10007951 pacid=23162277 polypeptide=Lus10007951 locus=Lus10007951.g ID=Lus10007951.BGIv1.0 annot-version=v1.0
MQPKADIRMTGRVGWRRRELAFLLLYAIAFYVYIIHRSIQLAQEHKSKLYGLRPGWLFLPRLNDLSDAQWRNFRGNLPILTAVFAIFAVLANTLKAFMYL
RAKGMSITWLLISLAYLSYLHGACTLHILLIASANFIIVMMFARTKYFSPAIWIFNLSVLLSNRLYEGYPFSMFGEQWAYLDNFRGTFRWHICFNFVILR
MISFGYDYHWANQESRFDQEKHIQRCHSCKSGTMCYQLLQERSVQIDKFSFTVYLSYLVYAPLYLAGPIVSFNAFASQLDMPVRIFAIRNVFWYGLRWIF
SFIIIEVATHFFHYNAFAVSGIWKLLSPMDIFIIGYGVLNFMWLKFSLIWRYFRLWSLINGIEAPENMPKCINNCYNLESFWKNWHASFNRWLVRYMYIP
LGGSGRKLLNVWVIFTFVAIWHDLEWKLLSWAWLTCLFFIPEMLVKSAMTKLQAESSFGELLFRELSAVAGAITITCLMVANLVGYVIGPSGINWLMSKF
LTREGLPVLGVMMVSFYVGVKLMFHIDDAKPKRQYQRHRES

DESeq2's median of ratios [FLAX]

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Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol HYPR_s2_CTRR_s2_FoxR_s4_CTRR_s4_FoxR_r1_CTRR_r1_FoxR_r3_CTRR_r3_FoxR_r1s2_CTRR_r1s2_FoxR_r3s2_CTRR_r3s2_FoxR_s6_CTRR_s6_Al4R_s6_Al12R_s6_Al24R_s8_CTRR_s8_Al4R_s8_Al12R_s8_Al24R_r5_CTRR_r5_Al4R_r5_Al12R_r5_Al24R_r7_CTRR_r7_Al4R_r7_Al12R_r7_Al24LEAF_NLEAF_PLEAF_NPKSAMAR_BetAR_rdfcPARTOP_BetTOP_rdfiFIBaiFIBbMID_BetMID_rdftFIBatFIB_GrtFIB_LitFIB_BitFIBbtFIBb_PUL8tFIBb_PUL24tFIBb_PUL96tFIBb_OPP8tFIBb_OPP24tFIBb_OPP96sXYLasXYLbsXYLb_PUL8sXYLb_PUL24sXYLb_PUL96sXYLb_OPP8sXYLb_OPP24sXYLb_OPP96
AT1G57600 MBOAT (membrane bound O-acyl t... Lus10007951
[exp]
0 1
AT2G34970 Trimeric LpxA-like enzyme (.1) Lus10018991
[exp]
6.0 0.8250
AT1G12700 RPF1 RNA processing factor 1, ATP b... Lus10020134
[exp]
6.2 0.8278
AT5G35930 AMP-dependent synthetase and l... Lus10020348
[exp]
6.6 0.8178
AT2G23140 RING/U-box superfamily protein... Lus10024899
[exp]
8.9 0.8052
AT3G21300 RNA methyltransferase family p... Lus10009743
[exp]
9.2 0.8282
AT1G72880 Survival protein SurE-like pho... Lus10015610
[exp]
14.5 0.7488
AT3G17310 DRM3, AtDRM3 domains rearranged methyltrans... Lus10043099
[exp]
17.7 0.7986
AT1G60860 AGD2 ARF-GAP domain 2 (.1) Lus10030921
[exp]
18.6 0.7769
AT1G06590 unknown protein Lus10043409
[exp]
32.4 0.7862
AT3G61620 RRP41 3'-5'-exoribonuclease family p... Lus10003036
[exp]
32.5 0.7802

Lus10007951 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.