Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G73880 297 / 4e-97 UGT89B1 UDP-glucosyl transferase 89B1 (.1) AT5G03490 219 / 4e-67 UDP-Glycosyltransferase superfamily protein (.1) AT1G51210 197 / 1e-58 UDP-Glycosyltransferase superfamily protein (.1) AT2G15490 197 / 3e-58 UGT73B4 UDP-glycosyltransferase 73B4 (.1.2.3) AT2G15480 195 / 1e-57 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT4G34135 181 / 2e-52 UGT73B2 UDP-glucosyltransferase 73B2 (.1.2) AT2G36780 181 / 4e-52 UDP-Glycosyltransferase superfamily protein (.1) AT2G36800 179 / 2e-51 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT1G06000 175 / 2e-50 UDP-Glycosyltransferase superfamily protein (.1) AT2G36770 174 / 1e-49 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013500 [exp] 587 / 0 AT1G73880 379 / 2e-127 UDP-glucosyl transferase 89B1 (.1) Lus10034650 [exp] 304 / 2e-99 AT1G73880 484 / 6e-169 UDP-glucosyl transferase 89B1 (.1) Lus10036837 [exp] 238 / 8e-74 AT5G03490 468 / 2e-162 UDP-Glycosyltransferase superfamily protein (.1) Lus10036840 [exp] 238 / 8e-74 AT5G03490 468 / 2e-162 UDP-Glycosyltransferase superfamily protein (.1) Lus10014079 [exp] 205 / 3e-61 AT4G34131 483 / 3e-168 UDP-glucosyl transferase 73B3 (.1) Lus10014083 [exp] 197 / 4e-58 AT4G34131 489 / 2e-170 UDP-glucosyl transferase 73B3 (.1) Lus10019832 [exp] 190 / 2e-55 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10019835 [exp] 189 / 4e-55 AT2G15480 476 / 3e-165 UDP-glucosyl transferase 73B5 (.1.2) Lus10014086 [exp] 187 / 3e-54 AT2G15490 496 / 4e-173 UDP-glycosyltransferase 73B4 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G065100 [exp] 294 / 7e-96 AT1G73880 539 / 0.0 UDP-glucosyl transferase 89B1 (.1) Potri.010G137000 [exp] 263 / 1e-83 AT5G03490 482 / 4e-168 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G303600 [exp] 202 / 3e-60 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303000 [exp] 199 / 4e-59 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303700 [exp] 199 / 6e-59 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303300 [exp] 198 / 1e-58 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.009G099032 [exp] 193 / 1e-56 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G098966 [exp] 191 / 3e-56 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G098400 [exp] 190 / 2e-55 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G302300 [exp] 189 / 3e-55 AT4G34131 488 / 4e-170 UDP-glucosyl transferase 73B3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10007972 pacid=23162323 polypeptide=Lus10007972 locus=Lus10007972.g ID=Lus10007972.BGIv1.0 annot-version=v1.0 ATGAAGTACTTCCGCGCTCACCACTACCCTCTAATCCTTCAGCAGTTCAAATCCGAACCTTGGACGACAAACCCTCCATCGGCAATCATCGCTGATTTCT TCCTCGGATGGACCAACCAATTAGCTTCGGAATTGGGCATCCGCCACGTCCTCTTCTCCCCCTCCGGCGCCTTTGCAATATCCGTCGCCACTTCCCTCTG GCGTGACGAGCCTCTGTGTCCGATTAATGATGAGGAGATCATAACTTTCCCTACTGTCCCCAATTCTCCTAGCTACCCTTGGCGGCAGATCTCCTTCATT TACCGGATGCTTGAGAAAGGCGATCCTGATCGGGAAATCTTTCGCGATTGCTTCTTAGCGAATCTTTCCAGTTGGGGGATCGTGATCAATACATTTGCTC GAATCGAGCAGCCGTACATCGACCACTTGAAACGAGAATCATCTCACAGCCGTGTGTGGGCGATGGGGCCGTTGCTCCCTCCTCCATCAGGCGGAGGAAG CAGCGGCGATCGGGGTGGAGCAAGCTCGATCCCGTCTGATCAGATTCGGACGTGGCTCGATTCTCGCCCTGATCGCTCTGTTGTGTACATCTGCTTCGGG AGCAGGACGTCATTGACGGATGAGCAAATGAAGCCGTTATCCGCCGCCTTGGAAAAGAGAACCGGTGTCTCGTTCGTGTGGTGCGTCAGGCAATCGACAG AGGCCGGTAGCGCGTCGCTGCCGGAGGAGTTTGATACTCGGGTTTTGGGGAGGGGGTTGGTGATTAGGGGGTGGGCTCCACAGGTGGAGATACTGAGGCA TAAGGCGGTGGGGGCATTCCTAACGCACTGTGGATGGAATTCGACGATGGAAGGGCTGACGGCGGGGGTGGTGATGCTGACATGGCCGATGGGTGCTGAT CAGTATTCGAATGCGCAGCTGTTGGTGGATCAGCTGCGGGTTGGGATTCGAGTCGGGGAAGATACAGAAGTGATTCCCGATGAGAAGGAACTCGGGAGGG TTTTGGAGGAGGCGGTGGCGGAAGGAGAGGAGGCGGCGAGGGAAGGAGGGGTGTTGTCGGAGAGGGAAAGGGCGGAGGAGCTCAGGACGGCGGCGAGGGA TGCCCTTGTGGAAGGTGGTAGTTCGTTTACGGATTTGGATGAGTTTGTGGAGAAGCTTAATGGAAAAGACTAA
AA sequence Show only first row Show all	>Lus10007972 pacid=23162323 polypeptide=Lus10007972 locus=Lus10007972.g ID=Lus10007972.BGIv1.0 annot-version=v1.0 MKYFRAHHYPLILQQFKSEPWTTNPPSAIIADFFLGWTNQLASELGIRHVLFSPSGAFAISVATSLWRDEPLCPINDEEIITFPTVPNSPSYPWRQISFI YRMLEKGDPDREIFRDCFLANLSSWGIVINTFARIEQPYIDHLKRESSHSRVWAMGPLLPPPSGGGSSGDRGGASSIPSDQIRTWLDSRPDRSVVYICFG SRTSLTDEQMKPLSAALEKRTGVSFVWCVRQSTEAGSASLPEEFDTRVLGRGLVIRGWAPQVEILRHKAVGAFLTHCGWNSTMEGLTAGVVMLTWPMGAD QYSNAQLLVDQLRVGIRVGEDTEVIPDEKELGRVLEEAVAEGEEAAREGGVLSERERAEELRTAARDALVEGGSSFTDLDEFVEKLNGKD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G73880		UGT89B1	UDP-glucosyl transferase 89B1 ...		Lus10007972 [exp]	0	1
AT1G06000			UDP-Glycosyltransferase superf...		Lus10007971 [exp]	1.0	0.9913
AT4G02920			unknown protein		Lus10008160 [exp]	3.0	0.9853
AT5G02790		GSTL3	Glutathione transferase L3, Gl...		Lus10015049 [exp]	3.9	0.9850
AT1G63970		MECPS, ISPF	2C-METHYL-D-ERYTHRITOL 2,4-CYC...		Lus10028759 [exp]	4.2	0.9872
AT2G47140		AtSDR5	short-chain dehydrogenase redu...		Lus10013593 [exp]	4.5	0.9850
AT3G62150		ABCB21, PGP21	ATP-binding cassette B21, P-gl...		Lus10009988 [exp]	5.2	0.9836
AT1G60690			NAD(P)-linked oxidoreductase s...		Lus10023701 [exp]	6.5	0.9849
AT5G56260			Ribonuclease E inhibitor RraA/...		Lus10032885 [exp]	7.1	0.9797
AT2G47140		AtSDR5	short-chain dehydrogenase redu...		Lus10021258 [exp]	7.7	0.9812
AT4G19880			Glutathione S-transferase fami...		Lus10014304 [exp]	7.9	0.9848

Compare expression of checked genes

Lus10007972 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.