Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G42090 636 / 0 Lung seven transmembrane receptor family protein (.1) AT3G09570 394 / 9e-135 Lung seven transmembrane receptor family protein (.1) AT5G18520 388 / 2e-132 Lung seven transmembrane receptor family protein (.1) AT5G02630 323 / 4e-107 Lung seven transmembrane receptor family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033235 [exp] 521 / 0 AT5G42090 520 / 0.0 Lung seven transmembrane receptor family protein (.1) Lus10025283 [exp] 384 / 3e-130 AT5G18520 697 / 0.0 Lung seven transmembrane receptor family protein (.1) Lus10009065 [exp] 328 / 3e-109 AT5G18520 626 / 0.0 Lung seven transmembrane receptor family protein (.1) Lus10000821 [exp] 326 / 9e-108 AT5G18520 409 / 6e-140 Lung seven transmembrane receptor family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G147700 [exp] 659 / 0 AT5G42090 639 / 0.0 Lung seven transmembrane receptor family protein (.1) Potri.001G083100 [exp] 651 / 0 AT5G42090 642 / 0.0 Lung seven transmembrane receptor family protein (.1) Potri.006G214900 [exp] 381 / 1e-129 AT5G18520 612 / 0.0 Lung seven transmembrane receptor family protein (.1) Potri.016G081300 [exp] 379 / 7e-129 AT5G18520 609 / 0.0 Lung seven transmembrane receptor family protein (.1) Potri.013G049500 [exp] 365 / 4e-123 AT5G18520 430 / 2e-148 Lung seven transmembrane receptor family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0192 [flax] [poplar] GPCR_A PF06814 [flax] [poplar] Lung_7-TM_R Lung seven transmembrane receptor
Representative CDS sequence Show only first row Show all	>Lus10008267 pacid=23173734 polypeptide=Lus10008267 locus=Lus10008267.g ID=Lus10008267.BGIv1.0 annot-version=v1.0 ATGGCTCGGTTCCTTCTCTTCCCTCTCCTCATCACCATCTCCATCCTCTTCTCCATCTCCTCCGCCGAGATCCGCTCTTCGGAGGTCCGATCCGACGACC GCCCAATCATCCCCTTCGACGAATTTGGATTCACTCATTCCGGAATCCTCGAGCTCAACATCTCCAAGATCCGCCTCTCCAACACCAATCTCGACCAAGC CAAGATCGGTTTCTTCCTCTGCACTCGCGACACATGGCTCCACGTCCTCCAGCAGCTCGAGGACGGCGAGATCACCTGCGCTCTCCAGTCCGACCTGATC AAGACCGTCTTCACCTTCAAGGACATCCCTAAGAACAATGATTACTACGGCGTCGTGTACAAGGAACACGATGCCGATCAGTACACGCTCGTGTTCGCCA ATTGCCTGACGTCGGTCAAGGTCTCCATGGACGTCCATTCCGCTATGTATAACTTTGAGAGAGGTGGCAACACTCGCGATTACCTATCAGCTGGTAGAAC TATCCTCCCTAGGGTTTACTTCTTGTTTTCGTTGATCTATTTTGTCCTCGCCGGCATCTGGATTTCGATACTGTACAAGAAGCTACTCACCGTGTTCAGG ATTCATTTCTTCATGCTTGCTGTTGTTGTCATGAAGGCTTTGAATTTGCTCTGTGAAGCTGAGGATAAGTCTTATATCAAGAGGACTGGTACTGCCCATG GTTGGGATGTAGTATTTTACATATTTAGTTTTTTCAAGGGGATTACTCTATTCACTTTGATTGTGTTGATTGGGACTGGGTGGTCATTCTTGAAGCCTTA TCTGCAAGATAAGGAGAAGAAGGTGCTGATGATTGTGATACCTCTTCAAGTTGTTGCTAACATTGCACAGGTGGTTATCGACGAAACAGGCCCATACGGT CAGGATTGGATCACATGGAAGCAGGTTTTCTTGTTGGTTGATGTGGTTTGCTGCTGCGCTGTTCTATTCCCCATTGTTTGGTCCATCAAGAATCTGAGAG AGGCTGCCAGGACTGATGGAAAGGCTGCAGTGAATTTGATGAAGTTAACCCTTTTTAGGCAGTACTACATTGTGGTCATCTGCTACATTTACTTCACCCG CGTTGTGGTTTATGCACTGGAGACTATCACTTCGTATAAGTATCTCTGGACCAGTGTGGTGGCCAGCGAGTTGGCTACACTGTCATTTTACTTGTTCACT GGGTTGAAGTTTAAGCCTGAGGCGCACAATCCTTACTTTGTGATTGATGACGAGGAGGAGGAAGCTGCTGCTGAACAGTTGAAGCTCGAAGATGAATTTG AGTTGTAA
AA sequence Show only first row Show all	>Lus10008267 pacid=23173734 polypeptide=Lus10008267 locus=Lus10008267.g ID=Lus10008267.BGIv1.0 annot-version=v1.0 MARFLLFPLLITISILFSISSAEIRSSEVRSDDRPIIPFDEFGFTHSGILELNISKIRLSNTNLDQAKIGFFLCTRDTWLHVLQQLEDGEITCALQSDLI KTVFTFKDIPKNNDYYGVVYKEHDADQYTLVFANCLTSVKVSMDVHSAMYNFERGGNTRDYLSAGRTILPRVYFLFSLIYFVLAGIWISILYKKLLTVFR IHFFMLAVVVMKALNLLCEAEDKSYIKRTGTAHGWDVVFYIFSFFKGITLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANIAQVVIDETGPYG QDWITWKQVFLLVDVVCCCAVLFPIVWSIKNLREAARTDGKAAVNLMKLTLFRQYYIVVICYIYFTRVVVYALETITSYKYLWTSVVASELATLSFYLFT GLKFKPEAHNPYFVIDDEEEEAAAEQLKLEDEFEL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G42090			Lung seven transmembrane recep...		Lus10008267 [exp]	0	1
AT5G42090			Lung seven transmembrane recep...		Lus10033235 [exp]	1.4	0.9599
AT5G16510		RGP5	reversibly glycosylated protei...		Lus10020379 [exp]	1.4	0.9382
AT2G15570		TRX-M3, GAT1, A...	THIOREDOXIN-M3, GFP ARRESTED T...		Lus10014069 [exp]	2.6	0.9227
AT1G79550		PGK	phosphoglycerate kinase (.1.2)		Lus10031167 [exp]	3.5	0.9255
AT2G18840			Integral membrane Yip1 family ...		Lus10025478 [exp]	5.5	0.9301
AT5G07720			Galactosyl transferase GMA12/M...		Lus10021631 [exp]	6.0	0.9189
AT3G62720		ATXT1, XXT1	XYG XYLOSYLTRANSFERASE 1, xylo...		Lus10037514 [exp]	6.8	0.8916
AT4G22580			Exostosin family protein (.1)		Lus10028924 [exp]	6.9	0.9209
AT4G32390			Nucleotide-sugar transporter f...		Lus10002023 [exp]	7.3	0.9233
AT5G18520			Lung seven transmembrane recep...		Lus10009065 [exp]	7.7	0.9252

Compare expression of checked genes

Lus10008267 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.