Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G02600 548 / 0 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT2G44110 511 / 9e-179 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2) AT4G24250 392 / 3e-132 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) AT2G33670 318 / 5e-103 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT1G42560 300 / 2e-96 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT2G17480 300 / 5e-95 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT3G45290 292 / 5e-93 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT2G39200 293 / 1e-92 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT2G17430 291 / 4e-92 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT1G11310 286 / 4e-90 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027093 [exp] 893 / 0 AT4G02600 580 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10001336 [exp] 474 / 2e-163 AT4G02600 644 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Lus10026276 [exp] 421 / 6e-143 AT4G24250 576 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 322 / 1e-104 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 318 / 5e-102 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 317 / 4e-101 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10041410 [exp] 313 / 4e-100 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 312 / 1e-99 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10013211 [exp] 308 / 1e-98 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G146900 [exp] 597 / 0 AT4G02600 613 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000800 [exp] 597 / 0 AT4G02600 640 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.017G000900 [exp] 593 / 0 AT4G02600 639 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.013G069900 [exp] 535 / 0 AT4G02600 720 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) Potri.001G078800 [exp] 411 / 1e-139 AT4G24250 549 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Potri.007G064200 [exp] 319 / 7e-103 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.008G041400 [exp] 310 / 3e-99 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.002G006700 [exp] 307 / 2e-98 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 302 / 5e-96 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.010G220500 [exp] 300 / 3e-95 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10008340 pacid=23178449 polypeptide=Lus10008340 locus=Lus10008340.g ID=Lus10008340.BGIv1.0 annot-version=v1.0 ATGTCGGAAGGAGGTACAACGTTGGAGTACACTCCGACATGGGTGGTCGCCTTAGTCTGCACATTCATCGTCGTCATCTCCCTCGCCGTCGAACGATTTC TTCACTTCCTCGGCAAGGCACTTGCTAAAGAGGAAAAACCAGAAGCCACTGTTCGAAGCCCTGCAGAAGATCAAAGAAGGATCAACTCCGTCTGTATTCC AGAACACTGGGCTCATGAATGGCTCCCTTGCAGCAAAGAAGACGAATCAAAAGAAGCGTCGGAATCAGCAACTACTGCCCATTTCATGACCTTCTTCTCC GGCGGCGGGGGCGGCCGCCGCCGGCTTTTGGAGGGATCTGCCCGCCGCCGGCTTCTGGCGGAATCTGCTGCCGGAAGCTGTAAAGAGGGGAAAGTGCCGA TACTGTCGACAACAGCATTACACCATTTGCACATATTCATATTTGTGCTGGCATGTGTCCACGTCGCTTTCTCTGCTCTAACTATTCTCTTTGGAAGTGC AAAGATTAGACAGTGGAAGCATTGGGAGGATTCTGTCTCCAAGAAGAACTATGATCCTGAAGCTGCGAAAAGCTCGAGAATTACCCACGTGCAGGAGCAT GATTTCATCAAGAACCGGTTTCAGGGAATGGGGAGGAACTCTTACATTTTTGGTTTAGTGCATTCATTTTTCAAGCAATTCTATGGTTCTGTAAGCAAAT CTGATTACATCACGTTGCGAGCTGGTTTCATCGGGACTCATTGCAAGGGGAATCCCCAGTTCAATTTCCACAAGTACATGATGCGAGCTCTCGAAGCCGA CTTTAAGAAAGTCGTTGGTATAAGTTGGTATCTGTGGATATTTGTGGTTATTTTCTTGTTGCTGAACGTTGCTGGATGGCATGCATATTTCTGGATTGCA TTCGTTCCCTTCGTTCTTCTGCTAGCAGTCGGCACGAAGTTAGAGCACATCATAACCCAGTTGGCTACTGAAGTAGCTGAGAAACATGTAGCTGTAGCAG GGGATTTGGTGGTTCAACCTTCAGATGAACACTTCTGGTTCAAGAAACCAAAGCTTGTTCTGTTCCTCATCCATATTATCCTGTTCCAGAACTCCTTCGA ACTCGCCTTCATGTTCTTTATTCTGCTTCAATACAAGTTCGATTCCTGCATCATGGGGAAAGTTGGTTACATCATCCCCAGACTCATTATAGGAGTATTT GTACAGTTTGTCTGCAGCTACAGTACTCTTCCACTCTACGCCCTTGTGACACAAATGGGAAGTTCATTCAAGAAGGCGGTATTTGAAGAGCACGTTCAAG TGGGATTGGTTGGTTGGGCGAAGAACGCCAAGAAGAAAACAGTGCTAAGGAAGGCAGCTGCTAATGGCGGATCTAGCCTAGTTGGTCACAAAGAGGACTC GTCTCACACCGGGGCCTTCATCCAGCTGGCGAAAACGACATCTGAGGAGAGCAGCAGCAAGGGAGGAGGCGAGATTGTTGCGGACGATGACAGAACTCCG ACCCGTGGGACTTGA
AA sequence Show only first row Show all	>Lus10008340 pacid=23178449 polypeptide=Lus10008340 locus=Lus10008340.g ID=Lus10008340.BGIv1.0 annot-version=v1.0 MSEGGTTLEYTPTWVVALVCTFIVVISLAVERFLHFLGKALAKEEKPEATVRSPAEDQRRINSVCIPEHWAHEWLPCSKEDESKEASESATTAHFMTFFS GGGGGRRRLLEGSARRRLLAESAAGSCKEGKVPILSTTALHHLHIFIFVLACVHVAFSALTILFGSAKIRQWKHWEDSVSKKNYDPEAAKSSRITHVQEH DFIKNRFQGMGRNSYIFGLVHSFFKQFYGSVSKSDYITLRAGFIGTHCKGNPQFNFHKYMMRALEADFKKVVGISWYLWIFVVIFLLLNVAGWHAYFWIA FVPFVLLLAVGTKLEHIITQLATEVAEKHVAVAGDLVVQPSDEHFWFKKPKLVLFLIHIILFQNSFELAFMFFILLQYKFDSCIMGKVGYIIPRLIIGVF VQFVCSYSTLPLYALVTQMGSSFKKAVFEEHVQVGLVGWAKNAKKKTVLRKAAANGGSSLVGHKEDSSHTGAFIQLAKTTSEESSSKGGGEIVADDDRTP TRGT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G02600		MLO1, ATMLO1	MILDEW RESISTANCE LOCUS O 1, S...		Lus10008340 [exp]	0	1
AT4G01240			S-adenosyl-L-methionine-depend...		Lus10012157 [exp]	13.7	0.9036
AT4G00080		UNE11	unfertilized embryo sac 11, Pl...		Lus10001988 [exp]	16.2	0.8972
AT5G35700		FIM2, FIM5	FIMBRIN5, fimbrin-like protein...		Lus10012361 [exp]	18.4	0.8963
AT2G47270	bHLH	bHLH151, UPB1	UPBEAT1, sequence-specific DNA...		Lus10010001 [exp]	19.3	0.8978
AT3G21710			unknown protein		Lus10027176 [exp]	22.5	0.8898
AT5G15490		UGD3	UDP-glucose dehydrogenase 3, U...		Lus10034703 [exp]	26.8	0.8885
AT4G31470			CAP (Cysteine-rich secretory p...		Lus10011318 [exp]	31.2	0.8895
AT5G40830		ATRAD3, ATATR	S-adenosyl-L-methionine-depend...		Lus10012158 [exp]	39.0	0.8890
AT2G34790		MEE23, EDA28	MATERNAL EFFECT EMBRYO ARREST ...		Lus10036147 [exp]	39.5	0.8484
AT5G13930		ATCHS, TT4, CHS	TRANSPARENT TESTA 4, CHALCONE ...		Lus10011746 [exp]	42.2	0.8873

Compare expression of checked genes

Lus10008340 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.