Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G06900 1233 / 0 Insulinase (Peptidase family M16) family protein (.1) AT2G41790 462 / 4e-146 Insulinase (Peptidase family M16) family protein (.1) AT3G57470 416 / 7e-130 Insulinase (Peptidase family M16) family protein (.1), Insulinase (Peptidase family M16) family protein (.2), Insulinase (Peptidase family M16) family protein (.3) AT5G01440 140 / 8e-37 unknown protein AT3G57460 56 / 8e-08 catalytics;metal ion binding (.1) AT5G56730 52 / 2e-06 Insulinase (Peptidase family M16) protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042213 [exp] 1820 / 0 AT1G06900 1311 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10018071 [exp] 432 / 2e-134 AT2G41790 1377 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10018072 [exp] 430 / 8e-134 AT2G41790 1451 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10042064 [exp] 424 / 3e-132 AT2G41790 1320 / 0.0 Insulinase (Peptidase family M16) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G154600 [exp] 1349 / 0 AT1G06900 1461 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.006G050700 [exp] 434 / 1e-135 AT2G41790 1503 / 0.0 Insulinase (Peptidase family M16) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF00675 [flax] [poplar] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10008604 pacid=23180118 polypeptide=Lus10008604 locus=Lus10008604.g ID=Lus10008604.BGIv1.0 annot-version=v1.0 ATGCTATGCGGCTCGCCATGGAGTTTGGCCACTGCGAATAGGTTTGTTAAGGGAAGTCGAGCAGCAGTGAGTTTCAGGTGCAGCTTCACAGTTATCACGT CGACGACGACGAAGAAGAAGAAGCAGCGAGTCTGCAATTCCATCTCCTCGCCTTACGCTTATCTCAACGCTGTTGCCAAGATTCGGAGACGGAAAGCAGA GATGGTTGCTCGTTGCGCATTCAAATCTGACGACTTGGTGATAAAGTCGCCTAACGACAAGCGATTGTACAGAGTGATTGAGCTGGACAATGGACTCTGT GGCTTACTCATTCACGATCCTGAGATTTATCCCGACGGGAAAGCTCCTCCTCCGCCTGGAGAGGACGGAGAGGCTGCAACCCTAAAGGATGGTAGAGGAC TGAAGGATATGTCGGAGGATGACGAGGATGATGAAGAGCTTGATGACGAGGACGATGATATGGAAGAAGAGGACGACGATGATGAAGACGAGGAGGAGGA TGACGAAGATGGAGAAGGGGAGGAAGGGAATGGAAACAGTTCCCAGACTAGGAAGGCAGCTGCAGCTATGTGTGTTGGTGTGGGCAGCTTCCTCGACCCT AGAAATGCACAGGGACTGGCACATTTTCTAGATAACTATGAAAAGATATTCATTTCTTTCTGGTGGGATAGCAAGTATGATAGTTATTTGTCCAAGCATG GGGGCTGTTCAAATGCATACACTGAAGTGGAGAGTACCTGCTACCATTTTGATGTCAAGCCTGAATTTCTTAAGGGTGCATTGGAAAGGTTTTCTCAGTT TTTCATTTCTCCACTCGTGAAAAGTGAAGCCATGGAACGAGAGGTTCTTGCAGTGGACTCAGAGTTTAACCAGGTTTTACAGAATGATGGTTGCCGACTT CAACAGATCCAATGTCATACATCTGAACCGGGTCACCCTTTTAACGGATTCTTTTGGGGAAATAAGAAGAGTCTTGCAGATGCCGTAGATAAAGGGGTAG ATTTGCGGGAGCAAATTCTCAAAATGTATAATGATTACTATCACGGTGGAGTAATGAAGCTCGTTGTCATTGGGGGAGAGTCTTTGGACGTTCTGGAGGA CTGGGTTACAGAATTGTTTGCTAATGTCAGGAAAGGTCCTCAAGCACAGCCAACCTTCCAGGTAGAAGGCCCCGTCTGGGAAGCTGAGGGCAAGGGAAGT TTACTTTCTCTTTTCAAAGCTAGAGGATGGGCAACTTCATTGTCTGGCGGTGTTGGGGATGATGGAATGCATCGATCCTCCATAGCTTATGTTTTTGGCA TGTCAATACATCTGACTGACTCCGGCTTGGAAAAGATATTTGAGATTATTGGCTTAGTCTATCAATATCTGAAATTATTACGCGAGGTTTCTCCACAAGA ATGGATTTTTAAGGAACTTCAGGATATTGGAAACATGGAATTCAGATTTGTAGAAAATCAGGCTCAAGATGATTATGCAGTCGATCTAGCAGAAAACTTG CTCAAATATCCAGCTGAGCATGTTATCTACGGAGACTACGTCTATAAGACATGGGATGGTGAAAAGCTGAAAAATATTCTTAGCTTTTTCAAACCAGAGA ACATGAGAATTGATGTGCTTTCAAAGTCGTTCACCAATCTAGAAGGTTTCAAACTTGAACCATGGTTCGGATCTCGGTATACTGAGGAACAGATTCCGCT TCCTGTCATGCAACTGTGGAGTAATCCATCTGAAATTGATAGCTCTCTGCATCTACCATTGAAGAACGACTTCATTCCTACTGATTTTTCCATCCGTGCT GATAAGTCAGAACAATCAGTTCCAAAATGTATAATTGACGAACCAATAATGAAGTTCTGGTACAAGCTTGATAGCACTTTTAAGCATCCTCGTGTCAATG CATATTTCCGCATAAATCTCAAGGGAGGCTATGATAACGTGAAGAATAGTCTCATGACTGAACTATTTATCAACCTCCTAAAGGATGAGCTAAATGAGAT GATATATCAGGCTAGCGTTGCAAAGTTGGATACATCTGTATCTTTCATCGGTGATCAATTGGAGCTGAAGGTTTATGGTTTCAACGACAAGGTTGCAGTC TTGCTGTCCAAAGTTTTGATGGTAGCCAAATCTTTCATCCCAGCAGATGACCGTTTTAAGGTCATCAAAGAGGACGTTGAGAGAAGGCTTAAAAATGCAA ACATGAAGCCTCTCAATCATTCTTCTTATCTGAGACTCCAACTTCTTTGTAAGAATTTCTATGATGTGCAAGAGAAGCAAGATGTGCTGCATCACATAAA TTTAAATGATTTGAGAGCATTTATTCCGGAGCTCCGTTCCCAGCTCTACATAGAGGGTTTTTGTCATGGCAATTTGTTAGAAGAAGAAGCTCTCAGCATT GCTACTATTTTTAAAAGCAACTTCCCTGTGCAACCACTTCCAGTGAATATGAGACATAAAGAGCATATTATTCGTCTCCCTGCTGGTGCCAACCTTGTCA GGGACGTGAATGTGAAGAATAAATCTGAAACGAATTCGGTAGTTGAGCTTTATTTCCAAATTGAGCCTGATCAAGGCTCAGAAGCATTTAAGTTGAAGGC ATTGATAGATCTTTTTGACGAAATTGTGAATGAACCATTCTTCAATCAGCTAAGGACGAAGGAGCAACTTGGTTATGTTGTTCAGTGCAGTCCCCGAACC ACGTACCGCATTCATGGATTTTGCTACGTCGTTCAATCTGCCAAATACAACCCAGTTTACCTTCAAGGGAGAGTTGAAAGCTTTATAAATGGCCTCGAAG ATTTGCTGCAAGGGCTCGATGAATCATCTTTTGAGAACTACAAAACTGGGTTGCTGAGTAAACTGCTTGAGAAGGATCCCTCTCTCCAGGACGAAACTAA TCGCCTGTGGAATCAGATTGTCGACAAAAGGTATGTGTTCGACTTCTTGCTGAAGGAAGCGGAAGAACTGAAGAACATTACGAAGAGCGAAGTCATCGAC TGGTGCAGAGAGTATCTGCTTCAGTCGTCTCCTAAATGCAGGAGACTTGCCGTTCGAGTCTGGGGCTGCGAAGCTGATTTGAAGGAGCTCGAAAGACGTC CAGACTCGGAACAGGTTATAAAGGACCTATCGGCCTTCAAGATTTCGACCGATTGCTACCCTAGCCTTTGCTGA
AA sequence Show only first row Show all	>Lus10008604 pacid=23180118 polypeptide=Lus10008604 locus=Lus10008604.g ID=Lus10008604.BGIv1.0 annot-version=v1.0 MLCGSPWSLATANRFVKGSRAAVSFRCSFTVITSTTTKKKKQRVCNSISSPYAYLNAVAKIRRRKAEMVARCAFKSDDLVIKSPNDKRLYRVIELDNGLC GLLIHDPEIYPDGKAPPPPGEDGEAATLKDGRGLKDMSEDDEDDEELDDEDDDMEEEDDDDEDEEEDDEDGEGEEGNGNSSQTRKAAAAMCVGVGSFLDP RNAQGLAHFLDNYEKIFISFWWDSKYDSYLSKHGGCSNAYTEVESTCYHFDVKPEFLKGALERFSQFFISPLVKSEAMEREVLAVDSEFNQVLQNDGCRL QQIQCHTSEPGHPFNGFFWGNKKSLADAVDKGVDLREQILKMYNDYYHGGVMKLVVIGGESLDVLEDWVTELFANVRKGPQAQPTFQVEGPVWEAEGKGS LLSLFKARGWATSLSGGVGDDGMHRSSIAYVFGMSIHLTDSGLEKIFEIIGLVYQYLKLLREVSPQEWIFKELQDIGNMEFRFVENQAQDDYAVDLAENL LKYPAEHVIYGDYVYKTWDGEKLKNILSFFKPENMRIDVLSKSFTNLEGFKLEPWFGSRYTEEQIPLPVMQLWSNPSEIDSSLHLPLKNDFIPTDFSIRA DKSEQSVPKCIIDEPIMKFWYKLDSTFKHPRVNAYFRINLKGGYDNVKNSLMTELFINLLKDELNEMIYQASVAKLDTSVSFIGDQLELKVYGFNDKVAV LLSKVLMVAKSFIPADDRFKVIKEDVERRLKNANMKPLNHSSYLRLQLLCKNFYDVQEKQDVLHHINLNDLRAFIPELRSQLYIEGFCHGNLLEEEALSI ATIFKSNFPVQPLPVNMRHKEHIIRLPAGANLVRDVNVKNKSETNSVVELYFQIEPDQGSEAFKLKALIDLFDEIVNEPFFNQLRTKEQLGYVVQCSPRT TYRIHGFCYVVQSAKYNPVYLQGRVESFINGLEDLLQGLDESSFENYKTGLLSKLLEKDPSLQDETNRLWNQIVDKRYVFDFLLKEAEELKNITKSEVID WCREYLLQSSPKCRRLAVRVWGCEADLKELERRPDSEQVIKDLSAFKISTDCYPSLC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G06900			Insulinase (Peptidase family M...		Lus10008604 [exp]	0	1
AT1G76050			Pseudouridine synthase family ...		Lus10017250 [exp]	6.0	0.8970
AT1G12800			Nucleic acid-binding, OB-fold-...		Lus10008475 [exp]	6.1	0.9033
AT1G73970			unknown protein		Lus10000648 [exp]	8.8	0.8861
AT3G48500		PDE312, PTAC10	PLASTID TRANSCRIPTIONALLY ACTI...		Lus10005031 [exp]	11.3	0.9018
AT5G16715		EMB2247	embryo defective 2247, ATP bin...		Lus10009139 [exp]	16.9	0.8872
AT4G31210			DNA topoisomerase, type IA, co...		Lus10020186 [exp]	17.7	0.8849
AT3G48110		EDD1	EMBRYO-DEFECTIVE-DEVELOPMENT 1...		Lus10042915 [exp]	18.5	0.8842
AT5G26742		EMB1138	embryo defective 1138, DEAD bo...		Lus10001425 [exp]	21.9	0.8883
AT3G16000		MFP1	MAR binding filament-like prot...		Lus10025769 [exp]	27.7	0.8632
AT5G49030		OVA2	ovule abortion 2, tRNA synthet...		Lus10043413 [exp]	28.5	0.8788

Compare expression of checked genes

Lus10008604 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.