Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G03210 148 / 4e-41 ATFUT2, FUT2 fucosyltransferase 2 (.1) AT2G03220 137 / 3e-37 ATFUT1, ATFT1, FT1, MUR2 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) AT2G15350 129 / 7e-35 ATFUT10, FUT10 fucosyltransferase 10 (.1) AT1G14100 130 / 8e-35 FUT8 fucosyltransferase 8 (.1) AT1G14070 130 / 8e-35 FUT7 fucosyltransferase 7 (.1) AT1G14080 119 / 1e-30 ATFUT6, FUT6 fucosyltransferase 6 (.1) AT2G15370 118 / 2e-30 ATFUT5, FUT5 ARABIDOPSIS FUCOSYLTRANSFERASE 5, fucosyltransferase 5 (.1) AT2G15390 108 / 7e-27 ATFUT4, FUT4 fucosyltransferase 4 (.1.2) AT1G14110 104 / 2e-25 ATFUT9, FUT9 fucosyltransferase 9 (.1) AT1G74420 100 / 4e-24 ATFUT3, FUT3 fucosyltransferase 3 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026128 [exp] 271 / 3e-88 AT2G03220 395 / 4e-132 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10041642 [exp] 184 / 1e-54 AT2G03220 454 / 8e-155 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10008696 [exp] 169 / 5e-49 AT2G03220 504 / 3e-174 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10013549 [exp] 165 / 2e-47 AT2G03220 357 / 4e-117 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10024076 [exp] 162 / 2e-46 AT2G03220 374 / 5e-124 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10041645 [exp] 160 / 4e-46 AT2G03220 315 / 2e-101 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10041644 [exp] 159 / 2e-45 AT2G03220 379 / 7e-126 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Lus10008693 [exp] 145 / 1e-41 AT2G03210 305 / 6e-100 fucosyltransferase 2 (.1) Lus10026125 [exp] 145 / 2e-41 AT2G03210 305 / 6e-100 fucosyltransferase 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G034100 [exp] 172 / 6e-50 AT2G03220 560 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191401 [exp] 170 / 1e-48 AT2G03220 555 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191200 [exp] 167 / 4e-48 AT2G03220 570 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.001G033800 [exp] 162 / 7e-46 AT2G03220 524 / 3e-180 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191500 [exp] 155 / 1e-43 AT2G03220 570 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.008G090000 [exp] 151 / 3e-42 AT2G03220 744 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1) Potri.003G191301 [exp] 143 / 6e-39 AT2G03220 524 / 0.0 MURUS 2, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03254 [flax] [poplar] XG_FTase Xyloglucan fucosyltransferase
Representative CDS sequence Show only first row Show all	>Lus10008691 pacid=23161972 polypeptide=Lus10008691 locus=Lus10008691.g ID=Lus10008691.BGIv1.0 annot-version=v1.0 ATGGCTCATCGTATCACAAACTTCCATCTCCTTACCAGGCTTCGAGAATACGAGCAGCATCACAAGTGTTGTGAGCCATTCTCTGAACCGTTCAACACAA CTTTCCGAGAATCGGTCAGGAAGAAGAATAATAACAATTCGATCTACACTGGCCCGGATGATCATTGCAGGGAAACCGTTTTCCATCACGTAGCTATCTA CCTCTTCAACCCATCGAACCAAGCGTGGGGACTCATCACCAGATTCCACGAATCCTATCTTGCAAACGCTGACCAGAGAATCGGTCTCCAGATTCGAGTC ATGAACCCGGAAATCAGCCCGAATCCTCTCGTCCTGAAGCAGATTCTCAGGTGCACACAAATGGAAGCACGAATCCTGCCGGAGTTCCAGCAGAACAAGA CCGCCATAATAAAGACAGAATCATCATCATCGAAAGCAGTTCTAGTCGCGTCGTTATCTAGCGAATTTTATACAAATTCGAAGGACTTGTTCTGGGAAAC TCCAACCGCGTCAGTTTACCAGGCGAGTCATGGAGTGAAGCAACGGTCCGGTGATGGGCCCCACAATATGAAAGCATGGGTTGATACGTATTTGTTGAGT ATGTGTGATGTTTTGGTCACGAGCGGTTGGTCGACGTTCGGGTACGTGAGTCAGGGTCTTGGAGGAAGTCGTGGATTCTGTAGATTCCCGATATTCGATT ATGGGGACAAGCTTGTAGACGGGCGGTTTCGATGGAGCCTTGCTTTCATTTCCCTCCTGATAGGGTAA
AA sequence Show only first row Show all	>Lus10008691 pacid=23161972 polypeptide=Lus10008691 locus=Lus10008691.g ID=Lus10008691.BGIv1.0 annot-version=v1.0 MAHRITNFHLLTRLREYEQHHKCCEPFSEPFNTTFRESVRKKNNNNSIYTGPDDHCRETVFHHVAIYLFNPSNQAWGLITRFHESYLANADQRIGLQIRV MNPEISPNPLVLKQILRCTQMEARILPEFQQNKTAIIKTESSSSKAVLVASLSSEFYTNSKDLFWETPTASVYQASHGVKQRSGDGPHNMKAWVDTYLLS MCDVLVTSGWSTFGYVSQGLGGSRGFCRFPIFDYGDKLVDGRFRWSLAFISLLIG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G03210		ATFUT2, FUT2	fucosyltransferase 2 (.1)		Lus10008691 [exp]	0	1

Compare expression of checked genes

Lus10008691 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.