Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G46225 362 / 3e-126 ABIL1, ABI1L1 ABI-1-like 1 (.1.2.3) AT5G24310 149 / 2e-43 ABIL3 ABL interactor-like protein 3 (.1.2) AT3G49290 149 / 5e-43 ABIL2 ABL interactor-like protein 2 (.1.2) AT5G42030 123 / 4e-33 ABIL4 ABL interactor-like protein 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002151 [exp] 563 / 0 AT2G46225 370 / 2e-129 ABI-1-like 1 (.1.2.3) Lus10005919 [exp] 155 / 9e-45 AT5G24310 400 / 2e-140 ABL interactor-like protein 3 (.1.2) Lus10022393 [exp] 114 / 1e-29 AT5G24310 360 / 2e-125 ABL interactor-like protein 3 (.1.2) Lus10032421 [exp] 100 / 2e-24 AT3G49290 171 / 2e-51 ABL interactor-like protein 2 (.1.2) Lus10043223 [exp] 96 / 1e-21 AT2G32230 433 / 2e-142 proteinaceous RNase P 1 (.1) Lus10023052 [exp] 86 / 5e-20 AT5G24310 101 / 7e-27 ABL interactor-like protein 3 (.1.2) Lus10023654 [exp] 86 / 3e-19 AT5G42030 91 / 3e-21 ABL interactor-like protein 4 (.1) Lus10011102 [exp] 85 / 6e-18 AT4G29010 1043 / 0.0 ABNORMAL INFLORESCENCE MERISTEM, Enoyl-CoA hydratase/isomerase family (.1) Lus10034928 [exp] 74 / 7e-16 AT5G42030 87 / 4e-21 ABL interactor-like protein 4 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G092300 [exp] 421 / 2e-149 AT2G46225 396 / 1e-139 ABI-1-like 1 (.1.2.3) Potri.002G165900 [exp] 418 / 3e-148 AT2G46225 397 / 5e-140 ABI-1-like 1 (.1.2.3) Potri.012G016900 [exp] 157 / 1e-45 AT3G49290 353 / 5e-122 ABL interactor-like protein 2 (.1.2) Potri.001G088100 [exp] 139 / 8e-39 AT3G49290 265 / 9e-88 ABL interactor-like protein 2 (.1.2) Potri.003G142800 [exp] 135 / 2e-37 AT3G49290 292 / 3e-98 ABL interactor-like protein 2 (.1.2) Potri.018G082600 [exp] 93 / 4e-22 AT2G46225 94 / 1e-22 ABI-1-like 1 (.1.2.3)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10008737 pacid=23168996 polypeptide=Lus10008737 locus=Lus10008737.g ID=Lus10008737.BGIv1.0 annot-version=v1.0 ATGGAGTTGGAGCGAACCAAGTCCCAAAATCCCGCCATGACCTTCGACGAGGTCTCCATGGAGCGCAGCAAAAGCTTCGTTAAAGCTTTGCAGGAACTAA AGAACTTGAGGCCTCAGCTTTATTCAGCTGCAGATTACTGTGAGAAGTCTTATCTCAATAGTGAACAAAAGCAGATGGTTCTTGACAACCTGAAAGATTA TGCTGTGAGGGCACTAGTCAATGCTGTTGACCATCTTGGCACTGTTGCTTACAAGTTAACAGACTTGCTTGATCAACAAACATCAGATGTCTCCACCATT GGAGTCAAAGTTTCTTCCATAAGTCAGCAACTTCTTACATGCCAAACCTTTATAGAGAAAGAAGGTCTCAGGCAGCAGCAGTTGTTGGCCACGATTCCTC GACACCACAAGCATTACGTCTTACCAAATTCGGTTAGTAAGAAGGTACATTTTAGCCCCCAAGTACAGACTGATGCACGGCAAAACCATATTCATGCTAG ATCCCGTCTTCAACCTTCCGAATCTCCAGCTTCAAAAACACTCTCTTGGCACATATCCACGGAGACAAAGCCGACAATTAAAGGGTCTCTAACTACTTTG GAAAGCAGCGAAGACTCGAAATCTTCTGGAAGATCTTCCGAGTCATTTCAACTCTTAAATAAAAGCGACAGTACGCTGATAAGGCCCTCCGGAACATCAG CCTATCCATCAAGCACTGTCGTGCAACCTTTTGGTGCACCACGCAAGGAAGGGTCGGAGGGTTCTAAAAACTTGGGAGGGTTCAGGTCGTTCGACAACCC AAGACGCAACATTGTTCGTGCCACTGTCCCAGTTCGCAGCAAGAGCGTTCTCTCGGCTTTCTTCGCGAAACAGAAGACACCGAAGCTAACCGCTTCTTGA
AA sequence Show only first row Show all	>Lus10008737 pacid=23168996 polypeptide=Lus10008737 locus=Lus10008737.g ID=Lus10008737.BGIv1.0 annot-version=v1.0 MELERTKSQNPAMTFDEVSMERSKSFVKALQELKNLRPQLYSAADYCEKSYLNSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLDQQTSDVSTI GVKVSSISQQLLTCQTFIEKEGLRQQQLLATIPRHHKHYVLPNSVSKKVHFSPQVQTDARQNHIHARSRLQPSESPASKTLSWHISTETKPTIKGSLTTL ESSEDSKSSGRSSESFQLLNKSDSTLIRPSGTSAYPSSTVVQPFGAPRKEGSEGSKNLGGFRSFDNPRRNIVRATVPVRSKSVLSAFFAKQKTPKLTAS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G46225		ABIL1, ABI1L1	ABI-1-like 1 (.1.2.3)		Lus10008737 [exp]	0	1
AT2G46225		ABIL1, ABI1L1	ABI-1-like 1 (.1.2.3)		Lus10002151 [exp]	1.7	0.9252
AT1G06550			ATP-dependent caseinolytic (Cl...		Lus10020758 [exp]	2.8	0.9243
AT3G14170			Plant protein of unknown funct...		Lus10013177 [exp]	3.2	0.9533
AT3G27960			Tetratricopeptide repeat (TPR)...		Lus10008786 [exp]	6.0	0.9110
AT3G53520		ATUXS1, UXS1	UDP-glucuronic acid decarboxyl...		Lus10024436 [exp]	8.0	0.9286
AT1G56720			Protein kinase superfamily pro...		Lus10006215 [exp]	10.0	0.8733
AT3G27000		ATARP2, WRM, AR...	WURM, actin related protein 2 ...		Lus10006156 [exp]	12.4	0.9044
AT2G26800			Aldolase superfamily protein (...		Lus10036056 [exp]	15.9	0.8685
AT5G51710		ATKEA5, KEA5	K+ efflux antiporter 5, ARABID...		Lus10031687 [exp]	18.5	0.8316
AT5G42930			alpha/beta-Hydrolases superfam...		Lus10005709 [exp]	19.0	0.8979

Compare expression of checked genes

Lus10008737 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.