Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036305 [exp] 49 / 6e-08 ND / Lus10022000 [exp] 39 / 0.0002 ND / Lus10010244 [exp] 39 / 0.0003 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10008817 pacid=23151895 polypeptide=Lus10008817 locus=Lus10008817.g ID=Lus10008817.BGIv1.0 annot-version=v1.0 ATGAAGCCTTGTGCCGCCATTGCGGCGGCGGGGAGGGTTGTGAGAAGCTTAGGGGCCGGGTGTAGGATTGGGAGAAGCTTAGGGGCCGGTTGTTTACGTT GCTTTTTGGACGGAGGCGTTTTGGGCACTCCAAGGGGATTGCTTCTCGTCGGATTTGTCATCGACGGCGAATTAGGGGTTTGGAAGAGGTTTTGGAATCC GTCGACGGCGTCCCTCGGGATATATGGCGACGGAACTAAGGCTGGTGGGAGTAACCAAGGTGGATCGATGCCTACAGCTTCTGCACGCAAGTCTAGTACG ACATCACACTCTTCTTCTAGTGATAGTGGATCAAGTGGAAAGCAAAAAGAATCCAATGCTCTGAGTTCCTCTACCGAGACAGTGACGGCAATGATGATGT GGAAGACTAGTGTTAGCTAG
AA sequence Show only first row Show all	>Lus10008817 pacid=23151895 polypeptide=Lus10008817 locus=Lus10008817.g ID=Lus10008817.BGIv1.0 annot-version=v1.0 MKPCAAIAAAGRVVRSLGAGCRIGRSLGAGCLRCFLDGGVLGTPRGLLLVGFVIDGELGVWKRFWNPSTASLGIYGDGTKAGGSNQGGSMPTASARKSST TSHSSSSDSGSSGKQKESNALSSSTETVTAMMMWKTSVS

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10008817 [exp]	0	1
AT1G44100		AAP5	amino acid permease 5 (.1)		Lus10029703 [exp]	2.8	0.7404
AT5G25570			unknown protein		Lus10007669 [exp]	2.8	0.7108
AT5G43360		PHT1;3, ATPT4, ...	PHOSPHATE TRANSPORTER 3, phosp...		Lus10030506 [exp]	31.6	0.6124
AT3G09430			unknown protein		Lus10000245 [exp]	79.9	0.6609
AT2G40390			unknown protein		Lus10017423 [exp]	86.7	0.6624
					Lus10027105 [exp]	101.5	0.6484
AT5G03500			Mediator complex, subunit Med7...		Lus10029326 [exp]	103.4	0.6590
AT5G39050		PMAT1	phenolic glucoside malonyltran...		Lus10035802 [exp]	109.9	0.6364
AT1G73440			calmodulin-related (.1)		Lus10015884 [exp]	116.5	0.5799
AT5G51750		ATSBT1.3	subtilase 1.3 (.1)		Lus10018720 [exp]	125.5	0.6111

Compare expression of checked genes

Lus10008817 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.