Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G18730 322 / 3e-109 ATDGK3 diacylglycerol kinase 3 (.1) AT5G57690 321 / 3e-109 ATDGK4 diacylglycerol kinase 4 (.1) AT4G30340 320 / 1e-108 ATDGK7 diacylglycerol kinase 7 (.1) AT2G20900 128 / 7e-35 DGK5, ATDGK5 diacylglycerol kinase 5 (.1.2.3.4) AT4G28130 127 / 2e-34 DGK6, ATDGK6 diacylglycerol kinase 6 (.1) AT5G63770 84 / 6e-19 ATDGK2 diacylglycerol kinase 2 (.1.2) AT5G07920 75 / 1e-15 ATDGK1, DGK1 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) AT2G46090 41 / 0.0004 Diacylglycerol kinase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006991 [exp] 405 / 2e-141 AT2G18730 677 / 0.0 diacylglycerol kinase 3 (.1) Lus10015514 [exp] 386 / 2e-134 AT4G30340 707 / 0.0 diacylglycerol kinase 7 (.1) Lus10019987 [exp] 384 / 9e-134 AT4G30340 713 / 0.0 diacylglycerol kinase 7 (.1) Lus10039747 [exp] 127 / 1e-34 AT2G20900 751 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10033732 [exp] 127 / 3e-34 AT2G20900 730 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10031612 [exp] 125 / 2e-33 AT2G20900 719 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10018527 [exp] 121 / 4e-32 AT2G20900 681 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10012719 [exp] 86 / 1e-19 AT5G63770 957 / 0.0 diacylglycerol kinase 2 (.1.2) Lus10010896 [exp] 86 / 2e-19 AT5G63770 955 / 0.0 diacylglycerol kinase 2 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G096700 [exp] 348 / 8e-120 AT2G18730 702 / 0.0 diacylglycerol kinase 3 (.1) Potri.006G174700 [exp] 337 / 1e-115 AT4G30340 670 / 0.0 diacylglycerol kinase 7 (.1) Potri.001G408500 [exp] 129 / 9e-35 AT2G20900 695 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Potri.013G148500 [exp] 124 / 5e-33 AT2G20900 765 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Potri.005G070900 [exp] 84 / 7e-19 AT5G63770 897 / 0.0 diacylglycerol kinase 2 (.1.2) Potri.007G097900 [exp] 77 / 2e-16 AT5G63770 933 / 0.0 diacylglycerol kinase 2 (.1.2) Potri.012G066300 [exp] 73 / 4e-15 AT5G07920 1154 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Potri.002G162900 [exp] 45 / 1e-05 AT2G46090 492 / 3e-175 Diacylglycerol kinase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00609 [flax] [poplar] DAGK_acc Diacylglycerol kinase accessory domain CL0240 [flax] [poplar] PFK PF00781 [flax] [poplar] DAGK_cat Diacylglycerol kinase catalytic domain
Representative CDS sequence Show only first row Show all	>Lus10008907 pacid=23144235 polypeptide=Lus10008907 locus=Lus10008907.g ID=Lus10008907.BGIv1.0 annot-version=v1.0 ATGAGCGAGGAGCAGGTGTTTGATCTATCAGATGTGAAGCCACACGAATTTGTGAGGCATGGATTGATGTGCATTGAGAAGATGGCTACACTTGGCGATC TTTGTGCTAAAGAGTGTCGTGAGAAGATGAGGATTATGGTTGCTGGAGGGGATGGTACTGTGGGTTGGGTATTGGGGAGTCTAGCAGAACTTAACAAAGA GGGAAGGCAACCGATTCCTCCAGTAGGGGTTATTCCTCTTGGTACAGGCAATGACTTGGCTAGGAGTTTCGGTTGGGGAGGTTCATTTCCTTTTGCCTGG AAATCGGCTGTCAAACGATCTCTTGATAGGGCTACTGCTGGGCCAGTTTGCCGTCTGGACAGTTGGCAGGTCATAGTGTCAATGGCAGAAGGGCAAGTTG TGGATGCTCCTCATTCCTTGAAACCTACTGAAGATTGCCATCTTGACCAGGGCTTGGAAGTCGAGGGTCAGTTGCCTGAGAAAATGGCATGCTATGAAGG AGTGTTTTATAATTACTTCAGTATAGGAATGGATGCTCAAGTTGCTTATGGCTTCCACCATTTACGTAATGAAAAACCCTACCTTGCACAAGGTCCCATT GCAAAAAGGGTCTGA
AA sequence Show only first row Show all	>Lus10008907 pacid=23144235 polypeptide=Lus10008907 locus=Lus10008907.g ID=Lus10008907.BGIv1.0 annot-version=v1.0 MSEEQVFDLSDVKPHEFVRHGLMCIEKMATLGDLCAKECREKMRIMVAGGDGTVGWVLGSLAELNKEGRQPIPPVGVIPLGTGNDLARSFGWGGSFPFAW KSAVKRSLDRATAGPVCRLDSWQVIVSMAEGQVVDAPHSLKPTEDCHLDQGLEVEGQLPEKMACYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPI AKRV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G18730		ATDGK3	diacylglycerol kinase 3 (.1)		Lus10008907 [exp]	0	1
AT2G18730		ATDGK3	diacylglycerol kinase 3 (.1)		Lus10008906 [exp]	1.4	0.8018
AT2G18730		ATDGK3	diacylglycerol kinase 3 (.1)		Lus10006991 [exp]	1.4	0.7944
AT3G54020		AtIPCS1	Arabidopsis Inositol phosphory...		Lus10027742 [exp]	10.4	0.7739
AT2G18280	TUB	AtTLP2	tubby like protein 2 (.1.2)		Lus10026007 [exp]	15.0	0.6992
AT5G47200		AtRABD2b, AtRab...	ARABIDOPSIS RAB GTPASE HOMOLOG...		Lus10000595 [exp]	16.8	0.7068
AT3G26670			Protein of unknown function (D...		Lus10012589 [exp]	23.7	0.6983
AT1G53050			Protein kinase superfamily pro...		Lus10031651 [exp]	27.2	0.6921
AT1G29530			unknown protein		Lus10004585 [exp]	27.9	0.6520
AT5G24430			Calcium-dependent protein kina...		Lus10023234 [exp]	27.9	0.6089
AT1G75080	BZR	BZR1	BRASSINAZOLE-RESISTANT 1, Bras...		Lus10016307 [exp]	48.7	0.6517

Compare expression of checked genes

Lus10008907 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.