Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G67360 549 / 0 ARA12 Subtilase family protein (.1) AT2G05920 545 / 0 Subtilase family protein (.1) AT1G04110 537 / 0 SDD1 STOMATAL DENSITY AND DISTRIBUTION, Subtilase family protein (.1) AT1G01900 535 / 1e-180 SBTI1.1, ATSBT1.1 subtilase family protein (.1) AT3G14067 525 / 2e-176 Subtilase family protein (.1) AT4G34980 518 / 8e-174 SLP2 subtilisin-like serine protease 2 (.1) AT3G14240 514 / 4e-172 Subtilase family protein (.1) AT2G04160 492 / 1e-163 AIR3 AUXIN-INDUCED IN ROOT CULTURES 3, Subtilisin-like serine endopeptidase family protein (.1) AT5G51750 489 / 2e-162 ATSBT1.3 subtilase 1.3 (.1) AT5G59810 474 / 6e-157 ATSBT5.4 Subtilase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028895 [exp] 1423 / 0 AT5G67360 566 / 0.0 Subtilase family protein (.1) Lus10006689 [exp] 983 / 0 AT2G05920 563 / 0.0 Subtilase family protein (.1) Lus10007033 [exp] 962 / 0 AT5G67360 551 / 0.0 Subtilase family protein (.1) Lus10028893 [exp] 842 / 0 AT1G04110 580 / 0.0 STOMATAL DENSITY AND DISTRIBUTION, Subtilase family protein (.1) Lus10007036 [exp] 832 / 0 AT5G67360 564 / 0.0 Subtilase family protein (.1) Lus10006693 [exp] 795 / 0 AT5G67360 563 / 0.0 Subtilase family protein (.1) Lus10029570 [exp] 791 / 0 AT5G67360 550 / 0.0 Subtilase family protein (.1) Lus10029575 [exp] 790 / 0 AT5G67360 552 / 0.0 Subtilase family protein (.1) Lus10006303 [exp] 776 / 0 AT5G67360 563 / 0.0 Subtilase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G113700 [exp] 839 / 0 AT1G04110 538 / 0.0 STOMATAL DENSITY AND DISTRIBUTION, Subtilase family protein (.1) Potri.003G118700 [exp] 828 / 0 AT1G04110 585 / 0.0 STOMATAL DENSITY AND DISTRIBUTION, Subtilase family protein (.1) Potri.019G006570 [exp] 820 / 0 AT1G04110 568 / 0.0 STOMATAL DENSITY AND DISTRIBUTION, Subtilase family protein (.1) Potri.003G118500 [exp] 807 / 0 AT1G04110 557 / 0.0 STOMATAL DENSITY AND DISTRIBUTION, Subtilase family protein (.1) Potri.003G118800 [exp] 780 / 0 AT1G04110 585 / 0.0 STOMATAL DENSITY AND DISTRIBUTION, Subtilase family protein (.1) Potri.014G074600 [exp] 607 / 0 AT1G01900 788 / 0.0 subtilase family protein (.1) Potri.002G256300 [exp] 548 / 0 AT1G04110 1020 / 0.0 STOMATAL DENSITY AND DISTRIBUTION, Subtilase family protein (.1) Potri.006G141200 [exp] 546 / 0 AT2G05920 1103 / 0.0 Subtilase family protein (.1) Potri.003G067000 [exp] 526 / 9e-177 AT3G14067 969 / 0.0 Subtilase family protein (.1) Potri.005G145300 [exp] 522 / 1e-176 AT5G67360 932 / 0.0 Subtilase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0570 [flax] [poplar] PPP-I PF05922 [flax] [poplar] Inhibitor_I9 Peptidase inhibitor I9 CL0570 [flax] [poplar] PF00082 [flax] [poplar] Peptidase_S8 Subtilase family CL0364 [flax] [poplar] Leu-IlvD PF02225 [flax] [poplar] PA PA domain
Representative CDS sequence Show only first row Show all	>Lus10008919 pacid=23175171 polypeptide=Lus10008919 locus=Lus10008919.g ID=Lus10008919.BGIv1.0 annot-version=v1.0 ATGGAGAAGAACAAGATGACAGTGACGATGGTTATAGCAACTCTAGCGATTCTGATCAGTCTTGCTTCACTGCCATCTTGCTTCTCCTCCGAATTATCCA ACCGCGGCCAGTTGAACACTTACATTGTGTTCCTGGAGAAGCCAGAAAGTTCCACCTTGCAACAAGAAGATGAAGAAGCTTGGAACAAATGGTACACTTC CTACCTTCCGGATCAGACTCCGACAACAAGCTCAAATGATGATCAGGACACTACCAGAATGGTCCATTCCTACTGCAATATCGCGACAGGATTCGCTGCC AGGCTGACCGAATATGAAGTGAAGGAAATGGAAAAAAAGGAAGGGGTCCTCTCAGTACACATGGACAAGACTTACTCTTTACACACAACTCGCACTCCAG AGTTCCTGGGGCTGCAGCAGAACAAAGGGTTATGGAACCCTTGGAAAAACGGCGGGGGTAAAGGCGTAATTATTGGAGTTCTCGACACCGGTATAGCACC CAACCACCCGTCGTTCAGAGACAACCACATGCCTCCTCCTCCTGCGAAATGGAAAGGCAAATGCGAGCTACCACGAGGAGCCAAATGTAACAACAAGCTA ATCGGTGCTAGGAATCTTGTCTCGCATAATCTGGATGCGTCGGATGATGATGGCCACGGGACGCACACTTCCAGCACGGCAGCTGGAAATGCGATCCCGT GGGCAAATGCTTTCGGTGAGGCGAACGGGACTGCGGTTGGGATGGCACCGTTAGCCCACATTGCAATGTACAGAGTCTGCGACGAGAAGCTCGGTTGTAC CGGTGCGGCTATACTTGCAGCAATGGACAGTGCGGTAGCCGACGGGGTTGATGTTCTTTCTCTTTCCCTCGGGGGTGATACAGAACCCTTCTACAAAGAT CCAATTGCGCTCGGTGCATTCGGAGCCATACAGAAGGGCGTTTTCGTAAGCTGTTCGGCAGGAAACGCTGGCCCGGTAAAATCCTCGGTGTCGAACGAGG CACCTTGGATTTTAACCGTCGGAGCTAGCACGATTGATAGGAAGATTAAGACAACGGTTGTGATTGGGAGCAAATCAGGATTTGATGGTCAATCTCTTTT CCAGGACAGGAAATTCCATTCCCAACAATTCCTGCCACTTGTGTATGCAGGTACAAACAGGAAAAGAAAAGGTGCAAAATTCTGTGGGCCCAACACATTG AGCAATTCCGTCAGGGGCAAAATCGTCCTGTGTGAAAGAGGGGGTGATATTGCCAGAATTGCCAAGGGACAGGAAGTGAAAAACAAAGGTGGAGCTGCAA TGATTCTGATGAACGATCAACCTAGTGGGTTTGATACATTAGCAGATGCTCATGTCCTCCCTGCATCACACGTCGGATTTTTAGCCGGTCAAGCAATCAA ATCATATATCAACTCGACGAAATATCCGAAAGCTACAATCTTTTTCAAAGGGACCATACTTGGTAACCCGAATTCCCCGCAAGTAGCTTCATTCTCCTCC AGGGGCCCCAGCATTGAATCTCCAGGAATCCTGAAACCTGACATCATTGGCCCTGGAGTCAACATCCTAGCTGCATGGCCGGTTTCGGTCGACAACATAA CCGACAACATCCCGTTCAATATGATCTCCGGAACTTCCATGTCTTGCCCTCACTTGAGCGGCATTGCTGCTCTGCTCAAGAGTGTTCACCCTGGTTGGTC CCCCGCCGCGATCAAATCAGCCATGATGACCACCGCCCACCTCTCGAATCTCGGCGACTTGCCTATACTGGACGAACAGCTTAAAAAGGCGAACTTGTTC GCCGTTGGTGCGGGACATGTTAATCCGAATGCAGCTGCTAATCCGGGGCTGGTTTACGACCTCAGCCCGAATGACTACATTCCTTACCTATGCGGGTTGG CTTACTTGAACAGTCAAATTTCGACGATCGTAAACCGCAAAGTGCATTGCGGGAATTCGAGCATTCCTGAAGCTCAGCTCAACTACCCTACATTCTCGAT CAAACTGGGATCCGCACCTCTGACTTACTCGAGAACCGTGACAAATGTCGGACTGGCGAATTCGGTCTACATTGCCAAGGTGATCGCGCCGGAAGGAGTT GATGTTAAGGTGAGTCCCAAGAAGATTGCTTTCAGCAGGCTGAATCAGAAGGCAACATATTCTGTGACGTTCACTAGAAAGGCTGGGAGATATGGTGCAA AGCCTTACTCTCAAGGATACTTGATCTGGGCGGCTCCTCAGTATCTGGTCACCAGTGCAATTGCTGTTGTGCCAAAGTGA
AA sequence Show only first row Show all	>Lus10008919 pacid=23175171 polypeptide=Lus10008919 locus=Lus10008919.g ID=Lus10008919.BGIv1.0 annot-version=v1.0 MEKNKMTVTMVIATLAILISLASLPSCFSSELSNRGQLNTYIVFLEKPESSTLQQEDEEAWNKWYTSYLPDQTPTTSSNDDQDTTRMVHSYCNIATGFAA RLTEYEVKEMEKKEGVLSVHMDKTYSLHTTRTPEFLGLQQNKGLWNPWKNGGGKGVIIGVLDTGIAPNHPSFRDNHMPPPPAKWKGKCELPRGAKCNNKL IGARNLVSHNLDASDDDGHGTHTSSTAAGNAIPWANAFGEANGTAVGMAPLAHIAMYRVCDEKLGCTGAAILAAMDSAVADGVDVLSLSLGGDTEPFYKD PIALGAFGAIQKGVFVSCSAGNAGPVKSSVSNEAPWILTVGASTIDRKIKTTVVIGSKSGFDGQSLFQDRKFHSQQFLPLVYAGTNRKRKGAKFCGPNTL SNSVRGKIVLCERGGDIARIAKGQEVKNKGGAAMILMNDQPSGFDTLADAHVLPASHVGFLAGQAIKSYINSTKYPKATIFFKGTILGNPNSPQVASFSS RGPSIESPGILKPDIIGPGVNILAAWPVSVDNITDNIPFNMISGTSMSCPHLSGIAALLKSVHPGWSPAAIKSAMMTTAHLSNLGDLPILDEQLKKANLF AVGAGHVNPNAAANPGLVYDLSPNDYIPYLCGLAYLNSQISTIVNRKVHCGNSSIPEAQLNYPTFSIKLGSAPLTYSRTVTNVGLANSVYIAKVIAPEGV DVKVSPKKIAFSRLNQKATYSVTFTRKAGRYGAKPYSQGYLIWAAPQYLVTSAIAVVPK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G67360		ARA12	Subtilase family protein (.1)		Lus10008919 [exp]	0	1
AT2G26490			Transducin/WD40 repeat-like su...		Lus10016289 [exp]	1.0	1.0000
AT3G18080		BGLU44	B-S glucosidase 44 (.1)		Lus10017997 [exp]	1.4	1.0000
AT5G09360		LAC14	laccase 14 (.1)		Lus10036070 [exp]	1.7	1.0000
AT4G02050		STP7	sugar transporter protein 7 (....		Lus10008372 [exp]	2.0	1.0000
AT1G08080		ATACA7, ACA7	A. THALIANA ALPHA CARBONIC ANH...		Lus10021456 [exp]	2.2	0.9956
AT1G55790			Domain of unknown function (DU...		Lus10032900 [exp]	2.4	0.9846
					Lus10014629 [exp]	2.6	0.9709
AT3G46290		HERK1	hercules receptor kinase 1 (.1...		Lus10023325 [exp]	3.0	0.9539
AT4G02210			unknown protein		Lus10032996 [exp]	3.3	0.9144
AT5G24910		ELA1, CYP714A1	EUI-like p450 A1, cytochrome P...		Lus10003361 [exp]	4.9	0.7267

Compare expression of checked genes

Lus10008919 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.