Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10008923 pacid=23175111 polypeptide=Lus10008923 locus=Lus10008923.g ID=Lus10008923.BGIv1.0 annot-version=v1.0 ATGGATGAAGGTTGTGGTGATCCACCTTCAAACTTGAGTGACAAGAGATTTCACTTCAAAAGGACCTCGGTTTGTCTCGGAAGAAGGTGCGAGTCAATAT ATTCTAAGTGCGCAAGAGAGTGTATAGCGAAGAGAATAAGGCAAGAGTATGACTGGCCTCAGCAGAGGCTGTTGAACGACTTGGCACATCAGGACTTGCT CTCTGTGATCTGTGGCGGTTGCCTGGTGGCGGGTCTCCTAGTGGCCACTTATGGCTTCCATCGAGTTTGTCGCTTCGACCTTCTTCTTGATCACCTCCTC GTCCTCCGCCTTTTACCTCTCCACCTCCTGAACCAACCTCTATGGCTCTATGTCTTCCTTGCTCAGCCTCCCTTTATCGCGGCGGTGGTGGTGCGGTCCG AAGATCTTTCCTCTTCAAGATGGAAAAAGAAGAGAAGGTGA
AA sequence Show only first row Show all	>Lus10008923 pacid=23175111 polypeptide=Lus10008923 locus=Lus10008923.g ID=Lus10008923.BGIv1.0 annot-version=v1.0 MDEGCGDPPSNLSDKRFHFKRTSVCLGRRCESIYSKCARECIAKRIRQEYDWPQQRLLNDLAHQDLLSVICGGCLVAGLLVATYGFHRVCRFDLLLDHLL VLRLLPLHLLNQPLWLYVFLAQPPFIAAVVVRSEDLSSSRWKKKRR

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10008923 [exp]	0	1
AT4G18770	MYB	ATMYB98	myb domain protein 98 (.1)		Lus10002384 [exp]	2.8	0.7482
AT5G01130			Protein of unknown function (D...		Lus10003164 [exp]	5.7	0.6661
AT5G17850			Sodium/calcium exchanger famil...		Lus10034284 [exp]	6.7	0.7780
AT4G39160	MYB		Homeodomain-like superfamily p...		Lus10023544 [exp]	7.3	0.7058
AT5G65090		DER4, MRH3, BST...	DEFORMED ROOT HAIRS 4, BRISTLE...		Lus10041708 [exp]	11.0	0.7368
AT2G29040			Exostosin family protein (.1)		Lus10001578 [exp]	12.1	0.7397
AT1G68260			Thioesterase superfamily prote...		Lus10031936 [exp]	16.6	0.5975
AT5G39020			Malectin/receptor-like protein...		Lus10008333 [exp]	17.6	0.7292
AT5G65530			Protein kinase superfamily pro...		Lus10012727 [exp]	20.8	0.7273
AT4G27570			UDP-Glycosyltransferase superf...		Lus10013367 [exp]	23.1	0.7184

Compare expression of checked genes

Lus10008923 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.