Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G17460 318 / 2e-108 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G091600 [exp] 361 / 3e-125 AT5G17460 374 / 2e-130 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10009117 pacid=23150031 polypeptide=Lus10009117 locus=Lus10009117.g ID=Lus10009117.BGIv1.0 annot-version=v1.0 ATGGCGAAGAACTTTTATTCCCGCTTCTCTGCCCTTCCTTCCCTTTTCAAGATCCGCAATCAACTTCTCCCATCTTTCAGATTACACACGGCGATCCATT GTCCTCCGGAAGCCCCTAACATACGCCACCGGTTTCCTCCTACTTTACAAGTTTCCTTTCGATCGTACGCACGACAGAGGGGGGAGGGGTATGATCTCTT TGGTGGCGTGAAGCCAGGTGATGACAACTTCAAGAAGTCATGGAAGAAAGAGATGGAGGAAGAAGAAGACACTTCTCTATGGACCGCAAGTGAAGGTGAA TCCGATGAAGACGATCCCAATGAACGCCTTAGTGATCTGCAGAAGGAGATTAGGAAGGTAAGAAAGCAGGCGAAACAGCACTCGGACCTAATTGATGCTG ATGACAGTGACGAGTTAAGAAGTGTGTGGTCTGGGAGTGATGAGGAGAAGAGCTTGTGGACTGGTAGCGAAATGGACGATGACGATGATATTCCCACTGA AGCACATCCAAATGAGGCGAGTGATAAGTATGTAGATAGATTGTTTGAGTTTGATGAGAAACCAAAATACAGGACGTTATCGGAAATGCTGAAAGAGGAG GAGGAACCGGAAGAGTTGTCCCCAGGGAAGCAAGCCAGGAAGCTTGCAGTTGAGAATGCATTGAAGAAACTGAAGAAGGGACCGGATGGGCGTTACATGA ACGTGTGGGAAGTCATGAGTGATATTGATATTCTAATTGGTGCGTTTGAAAACATTGTATCCGGGCCGGAGTATGAGGAGCTTAGAAAAGGAGGGCCTAA GCAGTTGAATATGGAGTTTTTCAAGGATATACAGGCACGGATGAGGGATCCTAATTATAAGTTCTCGCCTGAGCTGAAGTTAAAACCAAAGAGCAAGCTT GTAGCAAGAAAGAAATGGCAGAAAACCCAGTCCAGGCGAAGGAAAGCACAAAAACGTTGA
AA sequence Show only first row Show all	>Lus10009117 pacid=23150031 polypeptide=Lus10009117 locus=Lus10009117.g ID=Lus10009117.BGIv1.0 annot-version=v1.0 MAKNFYSRFSALPSLFKIRNQLLPSFRLHTAIHCPPEAPNIRHRFPPTLQVSFRSYARQRGEGYDLFGGVKPGDDNFKKSWKKEMEEEEDTSLWTASEGE SDEDDPNERLSDLQKEIRKVRKQAKQHSDLIDADDSDELRSVWSGSDEEKSLWTGSEMDDDDDIPTEAHPNEASDKYVDRLFEFDEKPKYRTLSEMLKEE EEPEELSPGKQARKLAVENALKKLKKGPDGRYMNVWEVMSDIDILIGAFENIVSGPEYEELRKGGPKQLNMEFFKDIQARMRDPNYKFSPELKLKPKSKL VARKKWQKTQSRRRKAQKR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G17460			unknown protein		Lus10009117 [exp]	0	1
AT4G33620			Cysteine proteinases superfami...		Lus10020445 [exp]	5.5	0.8526
AT4G32700		TEB	TEBICHI, helicases;ATP-depende...		Lus10007673 [exp]	5.5	0.8478
AT4G12020	WRKY	MEKK4, MAPKKK11...	MAPK/ERK KINASE KINASE 4, MITO...		Lus10016282 [exp]	7.7	0.8381
AT2G18750			Calmodulin-binding protein (.1...		Lus10029852 [exp]	8.5	0.8091
AT1G69010	bHLH	bHLH102, BIM2	BES1-interacting Myc-like prot...		Lus10005091 [exp]	8.5	0.8679
AT2G41790			Insulinase (Peptidase family M...		Lus10018071 [exp]	10.6	0.8315
					Lus10033298 [exp]	10.6	0.8523
					Lus10043073 [exp]	11.5	0.8233
AT1G11330			S-locus lectin protein kinase ...		Lus10015422 [exp]	11.7	0.8532
AT5G66900			Disease resistance protein (CC...		Lus10033299 [exp]	13.5	0.8366

Compare expression of checked genes

Lus10009117 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.