Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G65930 191 / 7e-55 PKCBP, ZWI POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) AT1G73860 67 / 5e-12 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G27000 66 / 6e-12 KATD, ATK4 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) AT1G63640 66 / 8e-12 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) AT1G09170 65 / 1e-11 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT1G72250 64 / 4e-11 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G27550 62 / 9e-11 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G27950 61 / 2e-10 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G55550 61 / 3e-10 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G18410 61 / 4e-10 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10009426 [exp] 233 / 2e-69 AT5G65930 1796 / 0.0 POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) Lus10006064 [exp] 227 / 2e-67 AT5G65930 1877 / 0.0 POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) Lus10009425 [exp] 93 / 2e-22 ND 41 / 4e-04 Lus10009667 [exp] 68 / 1e-12 AT1G73860 342 / 2e-108 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10009028 [exp] 66 / 1e-11 AT1G63640 351 / 5e-103 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Lus10002007 [exp] 64 / 4e-11 AT1G63640 941 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Lus10005582 [exp] 61 / 4e-10 AT1G72250 1109 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10013714 [exp] 61 / 4e-10 AT1G72250 1098 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10001306 [exp] 61 / 4e-10 AT3G44730 1240 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G146700 [exp] 196 / 2e-56 AT5G65930 1864 / 0.0 POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) Potri.001G455300 [exp] 196 / 2e-56 AT5G65930 1881 / 0.0 POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) Potri.001G104000 [exp] 67 / 2e-12 AT1G63640 1102 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Potri.013G033900 [exp] 66 / 1e-11 AT5G27950 676 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.003G127800 [exp] 66 / 1e-11 AT1G63640 1065 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Potri.011G140000 [exp] 63 / 8e-11 AT1G72250 1201 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.006G048650 [exp] 62 / 1e-10 AT3G10310 503 / 2e-169 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.012G056700 [exp] 61 / 5e-10 AT1G63640 857 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Potri.001G436200 [exp] 60 / 6e-10 AT1G72250 1248 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.005G030271 [exp] 59 / 2e-09 AT5G27550 865 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain
Representative CDS sequence Show only first row Show all	>Lus10009185 pacid=23154479 polypeptide=Lus10009185 locus=Lus10009185.g ID=Lus10009185.BGIv1.0 annot-version=v1.0 ATGAAGAAGGATATCGTTAGAAACAACGAGCAAATTGCTTCGATCTTGAAAATGCAAGGAGCTCAGCTTGCTGAGATGGAAGTGTTGTACAAGGAAGAAC AAATACTCCGGAAACGGGAAAGACAATTGGTCTCGAGCACCGATGAGTTCACAGTAGAGCATCCACGGAAGGATGACAAGGCCAAACAACATTTGTACAA TCGTAGCTTCGATGGCGGTGCTTCCCGGGAGAATGTCTTCGAAGATACACGAGTGACCGTTGACAGATATAATGTTTGTATATTCGCCTATGGTCAAACC GGTTCAGCCAAGAAGTTGACTATATTTGGCTTGGATGGCAATCCTGGAGTCACACTAAGAGCTACTGCAGAAATCTTCAACATTATCAAGCGCGACAATA AGAAATCCTCGTATTCGCTCAAGGTACTACTTACGTATGCTCTCATGGAGAACTATGAGACCGTAGAGTCCTACGGGATCAACGGAGATGACCGACATGT GAATCTCACGCTCGAGGTGGAGGGTCAGGAAGGAGAATGTTGTGTTCTTGTCAAATACACACCAGCTAATGGAAGGAAGAGGGAGGAGGACTTGAGGGTC GCTGGGTCATTTATAGTGGATATGTTGAGGAGGCTGGTGCTTGACAATTTCACTAGTACTCCACAACAGCCTAATCTTCTCCACCTGACTTGTAATGGGA AGATCGTGAAGGGTCGTTTTGATAGCCTATACAACTATTATGTGATCGAGGACTCCATCATTAAGGCTACGAATGGCTCTAGGTGGGTCATGTTTCAATT TCAATATACAATGAAGAAGAATGCCCTACAAACTCATGAAAAGATAAGAAGACCTCTATTGAAGATTGCATAA
AA sequence Show only first row Show all	>Lus10009185 pacid=23154479 polypeptide=Lus10009185 locus=Lus10009185.g ID=Lus10009185.BGIv1.0 annot-version=v1.0 MKKDIVRNNEQIASILKMQGAQLAEMEVLYKEEQILRKRERQLVSSTDEFTVEHPRKDDKAKQHLYNRSFDGGASRENVFEDTRVTVDRYNVCIFAYGQT GSAKKLTIFGLDGNPGVTLRATAEIFNIIKRDNKKSSYSLKVLLTYALMENYETVESYGINGDDRHVNLTLEVEGQEGECCVLVKYTPANGRKREEDLRV AGSFIVDMLRRLVLDNFTSTPQQPNLLHLTCNGKIVKGRFDSLYNYYVIEDSIIKATNGSRWVMFQFQYTMKKNALQTHEKIRRPLLKIA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G65930		PKCBP, ZWI	POTATO KINESIN-LIKE CALMODULIN...		Lus10009185 [exp]	0	1

Compare expression of checked genes

Lus10009185 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.