Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G22500 176 / 6e-56 UCP5, ATPUMP5, DIC1 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) AT4G24570 174 / 5e-55 DIC2 dicarboxylate carrier 2 (.1) AT5G09470 121 / 2e-34 DIC3 dicarboxylate carrier 3 (.1) AT3G54110 105 / 2e-28 ATUCP1, UCP1, UCP2, UCP, ATPUMP1 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) AT5G58970 94 / 2e-24 ATUCP2 uncoupling protein 2 (.1.2) AT1G14140 87 / 2e-21 Mitochondrial substrate carrier family protein (.1) AT4G03115 77 / 8e-18 Mitochondrial substrate carrier family protein (.1) AT5G19760 64 / 3e-13 Mitochondrial substrate carrier family protein (.1) AT5G66380 50 / 5e-08 ATFOLT1 folate transporter 1 (.1) AT1G34065 47 / 5e-07 SAMC2 S-adenosylmethionine carrier 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025725 [exp] 200 / 5e-66 AT2G22500 310 / 2e-106 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Lus10015897 [exp] 152 / 6e-47 AT4G24570 184 / 2e-56 dicarboxylate carrier 2 (.1) Lus10035936 [exp] 150 / 2e-46 AT4G24570 209 / 5e-67 dicarboxylate carrier 2 (.1) Lus10027755 [exp] 96 / 6e-25 AT3G54110 515 / 0.0 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) Lus10021123 [exp] 95 / 2e-24 AT3G54110 521 / 0.0 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) Lus10035538 [exp] 95 / 2e-24 AT3G54110 512 / 0.0 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) Lus10016445 [exp] 93 / 1e-23 AT5G58970 493 / 1e-177 uncoupling protein 2 (.1.2) Lus10040709 [exp] 92 / 2e-23 AT5G58970 512 / 0.0 uncoupling protein 2 (.1.2) Lus10017187 [exp] 88 / 5e-22 AT3G54110 501 / 0.0 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G045200 [exp] 191 / 1e-63 AT2G22500 286 / 3e-98 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.005G157300 [exp] 194 / 6e-63 AT2G22500 412 / 2e-145 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.002G104400 [exp] 193 / 1e-62 AT2G22500 427 / 1e-151 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.017G047800 [exp] 191 / 1e-61 AT4G24570 435 / 2e-154 dicarboxylate carrier 2 (.1) Potri.017G045100 [exp] 191 / 1e-61 AT2G22500 451 / 6e-161 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.017G045150 [exp] 191 / 2e-61 AT2G22500 457 / 3e-163 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.007G113000 [exp] 188 / 2e-60 AT4G24570 404 / 4e-142 dicarboxylate carrier 2 (.1) Potri.017G045332 [exp] 135 / 8e-40 AT2G22500 410 / 1e-144 DICARBOXYLATE CARRIER 1, PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5, uncoupling protein 5 (.1) Potri.006G095500 [exp] 98 / 1e-25 AT3G54110 513 / 0.0 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1) Potri.016G110100 [exp] 97 / 2e-25 AT3G54110 483 / 5e-174 ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1, ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1, plant uncoupling mitochondrial protein 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00153 [flax] [poplar] Mito_carr Mitochondrial carrier protein
Representative CDS sequence Show only first row Show all	>Lus10009270 pacid=23141864 polypeptide=Lus10009270 locus=Lus10009270.g ID=Lus10009270.BGIv1.0 annot-version=v1.0 ATGATTGTGACGGCGTCGCAATTGGCGTCGTACGATCAGATTAAAGAGGCGATTTTGGAGAAGGGTGTGATGGCGGACGGGTTAGGGACGCACGTGACGG CTAGTTTCGCGGCGGGGTTTGTGGCGTCGGTGGCGTCGAATCCGGTGGATGTGATTAAGACGAGGGTGATGAATATGGCTGTGGAGGCTGGGAAGGCGGC GCCGTACAGCGGAGCGATGGACTGTGCGATTAAGACGGTGAAGGCTGAAGGGCCGATGGCGTTGTATAAGGGATTCATCCCTACGATATCGAGGCAGGGT CCTTTCACTGTTGTGCTGTTTGTGACGCTTGAGCAGGTGAGGAAGCTGCTCAAGGATTTCTGA
AA sequence Show only first row Show all	>Lus10009270 pacid=23141864 polypeptide=Lus10009270 locus=Lus10009270.g ID=Lus10009270.BGIv1.0 annot-version=v1.0 MIVTASQLASYDQIKEAILEKGVMADGLGTHVTASFAAGFVASVASNPVDVIKTRVMNMAVEAGKAAPYSGAMDCAIKTVKAEGPMALYKGFIPTISRQG PFTVVLFVTLEQVRKLLKDF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G22500		UCP5, ATPUMP5, ...	DICARBOXYLATE CARRIER 1, PLANT...		Lus10009270 [exp]	0	1
AT4G24570		DIC2	dicarboxylate carrier 2 (.1)		Lus10009271 [exp]	1.0	0.9831
AT4G24570		DIC2	dicarboxylate carrier 2 (.1)		Lus10015897 [exp]	2.8	0.9410
AT2G01300			unknown protein		Lus10009104 [exp]	3.2	0.9099
AT5G17850			Sodium/calcium exchanger famil...		Lus10020318 [exp]	3.2	0.9227
AT5G01710			methyltransferases (.1)		Lus10014232 [exp]	3.3	0.9095
AT3G21570			unknown protein		Lus10034002 [exp]	3.5	0.9200
AT2G25250			unknown protein		Lus10041025 [exp]	3.7	0.9194
AT5G67300	MYB	ATMYB44, AtMYBr...	ARABIDOPSIS THALIANA MYB DOMAI...		Lus10010260 [exp]	4.2	0.9102
AT3G03280			unknown protein		Lus10013490 [exp]	5.2	0.9364
AT1G27730	C2H2ZnF	ZAT10, STZ	salt tolerance zinc finger (.1...		Lus10032848 [exp]	5.3	0.9307

Compare expression of checked genes

Lus10009270 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.