Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G50470 80 / 3e-18 MLA10, HR3 INTRACELLULAR MILDEW A 10, homolog of RPW8 3 (.1) AT3G50460 74 / 6e-16 HR2 homolog of RPW8 2 (.1) AT3G50450 69 / 2e-14 HR1 homolog of RPW8 1 (.1) AT5G66630 53 / 5e-08 DAR5 DA1-related protein 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10000836 [exp] 228 / 1e-76 AT3G50470 52 / 2e-08 INTRACELLULAR MILDEW A 10, homolog of RPW8 3 (.1) Lus10000835 [exp] 192 / 4e-62 AT3G50470 51 / 5e-08 INTRACELLULAR MILDEW A 10, homolog of RPW8 3 (.1) Lus10009329 [exp] 174 / 5e-55 AT5G66630 42 / 2e-04 DA1-related protein 5 (.1) Lus10000834 [exp] 128 / 3e-37 ND /
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G038600 [exp] 76 / 5e-17 AT3G50470 76 / 4e-17 INTRACELLULAR MILDEW A 10, homolog of RPW8 3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF05659 [flax] [poplar] RPW8 Arabidopsis broad-spectrum mildew resistance protein RPW8
Representative CDS sequence Show only first row Show all	>Lus10009328 pacid=23148882 polypeptide=Lus10009328 locus=Lus10009328.g ID=Lus10009328.BGIv1.0 annot-version=v1.0 ATGGACCCGTCGACAGGTCTGGTCGCCGGTGCTTCGTTGGGGGTAGCCTTCCAAGCGTTGTACGATACGATCACACGCATCGTGGTTCGGAATGCCACCA TAAGAAGCAGGCTAGATTCGTTGAATCGTAAATTGGAGAGGTTGAGCAGCAAGTTCAACGGCTTCGACAAACTCTACCCGGAACTTGATCCGACAACAGA AACCCTGAATCTCCGAGATCTGCTCGAGAAAGCCAGCGCCCTCATCCACGACTGCGCTGGGGTTCGATGGTGGCATCTCAGGAGAGCGCACAAGTTCTCG AAGCGGTTGGACACCCTAAGTGATTCGTTTGAGGAGTTCTTGCAAGTGGATATACAGATTGCTCAGTTCAGCCACATCCTAGCAATTGAGGCTAGGATTG TTGAGATGAACAAGAAATTGGACCGCATGTATGCGACAAAGGTCCGCGGCGACGGCGGCGTCTCCTTTACCCCGACTTCGAATGGTAGAGGGGACGGCAG GGCCAACTACGAAAATGTTCGTCGTCGTAATCATAACCGCCCAGGCCTGCGAACCGAGGTTCAATATGAGAGGGCGGGGACACGCAACTTCAAAATTGGC TTTTGCGTCAGCTTCCGTCCTCGTAATAGCGTTTACGACGATTAA
AA sequence Show only first row Show all	>Lus10009328 pacid=23148882 polypeptide=Lus10009328 locus=Lus10009328.g ID=Lus10009328.BGIv1.0 annot-version=v1.0 MDPSTGLVAGASLGVAFQALYDTITRIVVRNATIRSRLDSLNRKLERLSSKFNGFDKLYPELDPTTETLNLRDLLEKASALIHDCAGVRWWHLRRAHKFS KRLDTLSDSFEEFLQVDIQIAQFSHILAIEARIVEMNKKLDRMYATKVRGDGGVSFTPTSNGRGDGRANYENVRRRNHNRPGLRTEVQYERAGTRNFKIG FCVSFRPRNSVYDD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G50470		MLA10, HR3	INTRACELLULAR MILDEW A 10, hom...		Lus10009328 [exp]	0	1
AT1G60500		DRP4C	Dynamin related protein 4C (.1...		Lus10025903 [exp]	2.6	0.9571
AT5G51950			Glucose-methanol-choline (GMC)...		Lus10015012 [exp]	3.2	0.9453
AT4G31970		CYP82C2, JAH1	"cytochrome P450, family 82, s...		Lus10025923 [exp]	3.5	0.9382
AT1G20870			HSP20-like chaperones superfam...		Lus10007642 [exp]	5.5	0.9426
					Lus10041745 [exp]	6.5	0.9324
AT2G05920			Subtilase family protein (.1)		Lus10006689 [exp]	7.1	0.9361
AT2G44450		BGLU15	beta glucosidase 15 (.1)		Lus10031235 [exp]	10.1	0.9356
AT1G17020		ATSRG1, SRG1	senescence-related gene 1 (.1)		Lus10011986 [exp]	10.4	0.9199
AT5G08460			GDSL-like Lipase/Acylhydrolase...		Lus10028685 [exp]	10.5	0.9185
AT4G37710			VQ motif-containing protein (....		Lus10011555 [exp]	11.0	0.9214

Compare expression of checked genes

Lus10009328 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.