Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43820 439 / 7e-152 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G43840 424 / 4e-146 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT1G05680 403 / 1e-137 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G31790 392 / 2e-133 UDP-Glycosyltransferase superfamily protein (.1) AT1G05675 392 / 2e-133 UDP-Glycosyltransferase superfamily protein (.1) AT1G24100 362 / 9e-122 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT2G31750 360 / 6e-121 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT4G15490 268 / 1e-84 UGT84A3 UDP-Glycosyltransferase superfamily protein (.1) AT4G15480 265 / 1e-83 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1) AT1G05560 262 / 2e-82 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020556 [exp] 790 / 0 AT2G43820 472 / 1e-164 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10020559 [exp] 513 / 1e-180 AT2G43820 436 / 3e-150 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 446 / 2e-154 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006353 [exp] 400 / 2e-136 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10010712 [exp] 397 / 3e-135 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10014148 [exp] 395 / 1e-134 AT2G43840 407 / 2e-139 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006352 [exp] 388 / 1e-131 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10024486 [exp] 384 / 5e-130 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10006721 [exp] 369 / 2e-124 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G140500 [exp] 591 / 0 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G117200 [exp] 483 / 3e-169 AT2G43840 461 / 1e-160 UDP-glycosyltransferase 74 F1 (.1.2) Potri.017G032500 [exp] 429 / 6e-148 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.001G389200 [exp] 429 / 9e-148 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.014G175000 [exp] 426 / 2e-146 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.017G032300 [exp] 424 / 7e-146 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G032733 [exp] 422 / 3e-145 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 422 / 3e-145 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140300 [exp] 420 / 4e-144 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140600 [exp] 398 / 2e-136 AT2G43840 375 / 2e-127 UDP-glycosyltransferase 74 F1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10009412 pacid=23142608 polypeptide=Lus10009412 locus=Lus10009412.g ID=Lus10009412.BGIv1.0 annot-version=v1.0 ATGGAATCCCAAAACGGCCACGTCTTCCTCCTCCCCTACCCGGGTCAAGGACACCTAAACCCGATGATCCACTTCGCCCGTCGTCTCATAATCCGAGGCT TCCGAACTACCTTACTCACCACCAACTTCATCGCCTCCTCCTCAAAATTCGGCCCCACAATCGGTCAAGTTCACGTTGAAGCCATCTCTGATGGTTTCGA TGAGGGCGGCTTCTCCAGCTCCTCCTCCATCGACGACTACCTGACCCAGCTCGAAACAGCCGGCTCTGAAACGCTGTCGAATTTAATCAACAAGTACAAA CTGACGCCGTATCCGGTCAGCTGCTTGGTCTACGAGCCGTTTTTGCCGTGGGCGCTTGACGTGGCCAAGGAGCACAGGCTCTACGCGGCGTCGTTTTTCA CCCAGCCGTGCGCGGTGGATTTCATTTACTATTATATCCGGCACGGGCTGCTGAAGGTCCCCGTTGACAAGTGGCCGGTTCGGATTCCCGGGTTGCCTGA GTTGGAACCCCGGGATATGCCGTCGTTCGTGAATGCCCCCGAGGCTTACCCGGCTTATTTTGCAATGGTGGTGAATCAGTTTTTGAATACCGAGAAGGCC GATTATGTGCTAATTAACACGTTCTATGAGCTTGAGAAGGAGGCTATAGACACAATGTCCAAGGTTTGCCCAGTTCTAGCAATCGGACCAACCGTTCCAT CTACATACCTAGACAAACGAATGGTAGATGATGAAGAATATGGTGTAGACCTCTTTGCTCTAGAGCGATCCATCTCCACTTCGTGGATCGCCACAAAGCC TCCCAAGTCAGTAATCTATGTGGCATTCGGAAGCATGGTCACCTTTAACGAGGCTCAAATGACCGAGCTGGCTTCAGGCCTCAAGCGAACAAACTACTAC ATCATATGGGTCATCCACGATACCGAGCTAGCCAAGCTCCCTGCCAATTTCGTCAGTGATCTGGGGGATAAGGCACTGGTGGTGAATTGGACCCCACAGG TCCAGATCCTGGCGAGCGAGGCCATAGGTTGTTTTTTCACACACTCTGGGTGGAACTCTACGGTCGAAGCATTGAGCTTGGGAGTACCCATGGTGGCTAT GCCGCAATGGACAGACCAACCGCCCAACGCGCTTCTTGTAGAGCGAGTCTGGAAGGTCGGGGTTAGGGTTACGGTCGGGGCGGATGGAATTGTGAGTGGG GAAGAAGTGGAGAGATGTGTGAAGGAAGTGATGGAAGGTGAAAGAGGGAAGGAAATTTGGAGCAATTGTCAAAAATGGAAGGATTTAGCTTGCTTGGCTA TTAGTGAAGGTGGATCTTCTGATAAAAGTATTGATGAGTTTGTATTGAAACTGGTCGGTTAA
AA sequence Show only first row Show all	>Lus10009412 pacid=23142608 polypeptide=Lus10009412 locus=Lus10009412.g ID=Lus10009412.BGIv1.0 annot-version=v1.0 MESQNGHVFLLPYPGQGHLNPMIHFARRLIIRGFRTTLLTTNFIASSSKFGPTIGQVHVEAISDGFDEGGFSSSSSIDDYLTQLETAGSETLSNLINKYK LTPYPVSCLVYEPFLPWALDVAKEHRLYAASFFTQPCAVDFIYYYIRHGLLKVPVDKWPVRIPGLPELEPRDMPSFVNAPEAYPAYFAMVVNQFLNTEKA DYVLINTFYELEKEAIDTMSKVCPVLAIGPTVPSTYLDKRMVDDEEYGVDLFALERSISTSWIATKPPKSVIYVAFGSMVTFNEAQMTELASGLKRTNYY IIWVIHDTELAKLPANFVSDLGDKALVVNWTPQVQILASEAIGCFFTHSGWNSTVEALSLGVPMVAMPQWTDQPPNALLVERVWKVGVRVTVGADGIVSG EEVERCVKEVMEGERGKEIWSNCQKWKDLACLAISEGGSSDKSIDEFVLKLVG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G43820		SGT1, ATSAGT1, ...	UDP-glucose:salicylic acid glu...		Lus10009412 [exp]	0	1
AT3G18830		ATPMT5, AtPLT5	ARABIDOPSIS THALIANA POLYOL/MO...		Lus10026329 [exp]	4.5	0.8337
AT2G30990			Protein of unknown function (D...		Lus10017644 [exp]	12.3	0.8378
AT3G09920		PIP5K9	phosphatidyl inositol monophos...		Lus10022606 [exp]	15.9	0.8514
AT4G00440			Protein of unknown function (D...		Lus10017797 [exp]	18.7	0.8094
AT5G19440			NAD(P)-binding Rossmann-fold s...		Lus10016388 [exp]	22.6	0.8453
AT1G54340		ICDH	isocitrate dehydrogenase (.1)		Lus10012111 [exp]	23.2	0.8286
AT2G39710			Eukaryotic aspartyl protease f...		Lus10004713 [exp]	26.9	0.8393
AT2G38710			AMMECR1 family (.1.2)		Lus10029750 [exp]	38.1	0.7712
AT5G40240			nodulin MtN21 /EamA-like trans...		Lus10039481 [exp]	41.4	0.8331
AT5G60550		ATSNAK1, GRIK2	geminivirus rep interacting ki...		Lus10041298 [exp]	56.0	0.8222

Compare expression of checked genes

Lus10009412 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.