Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05680 173 / 8e-52 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT1G05675 171 / 6e-51 UDP-Glycosyltransferase superfamily protein (.1) AT2G31790 168 / 5e-50 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 157 / 5e-46 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G43840 152 / 4e-44 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT2G43820 151 / 1e-43 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT1G24100 142 / 7e-40 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT1G05560 127 / 1e-34 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT1G05530 124 / 1e-33 UGT75B2, UGT2 UDP-GLUCOSYL TRANSFERASE 2, UDP-glucosyl transferase 75B2 (.1) AT4G15550 114 / 8e-30 IAGLU indole-3-acetate beta-D-glucosyltransferase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020556 [exp] 283 / 2e-94 AT2G43820 472 / 1e-164 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10009412 [exp] 275 / 3e-91 AT2G43820 474 / 1e-165 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10020559 [exp] 173 / 9e-52 AT2G43820 436 / 3e-150 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 161 / 3e-47 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006351 [exp] 154 / 7e-46 AT1G05680 315 / 9e-106 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10010712 [exp] 154 / 2e-44 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10024486 [exp] 153 / 3e-44 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10009408 [exp] 139 / 8e-43 AT1G05680 108 / 3e-29 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10006721 [exp] 149 / 1e-42 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G140500 [exp] 193 / 2e-59 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G117200 [exp] 176 / 4e-53 AT2G43840 461 / 1e-160 UDP-glycosyltransferase 74 F1 (.1.2) Potri.001G389200 [exp] 174 / 6e-52 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032500 [exp] 173 / 6e-52 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032300 [exp] 171 / 8e-51 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.004G179300 [exp] 167 / 2e-49 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 166 / 3e-49 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 166 / 3e-49 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140300 [exp] 165 / 9e-49 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.015G071900 [exp] 157 / 1e-45 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10009417 pacid=23142605 polypeptide=Lus10009417 locus=Lus10009417.g ID=Lus10009417.BGIv1.0 annot-version=v1.0 ATGGGTTTGAATCAGTTTTCCAATACGGAGAAGGCTGGTTATGTGTTGATTAATATGTTCTACGAGCTTGAGAAAGAGCCTCCTAAATCAGTAATCTATG TGGCATTCGGTAACATGGTCACCTTCAACCATACCCAAATGACTGAGCTAGCATCTGGACTTAAGCGAACATACAAACACATCATGTGGGTCATATGTGA CACTGAGCTGGCCGAGCTCCCAACTGATTTTGCCAGTTACTTGGGCGACAAGACGAGTGGGCTCGTGGGTTGCTTTTTCACACATTGTGAGTGGAACTTA ATGAAAGCGTTGAGTCTGGGGATACCCATGGTGGCATCGCCACAGTGGTCCGGCCAGCCTCCCAATGCCATGCTTGCCGAGCAAGTTTGGAAAGTTGGAG TTAGGGGTAGAGTTGGGGAGGATGGGATTGTGAGTGGGGATGAAGTGGAGATCAGGTGTGTGAGAGAAGTGATGGAAGGTGAAATAGGGAAGGAAATAAG GAGCAATTGTGAGAAGTGGAAGGATTTGGCTTGCTTGGCTATTAGTGAAGGTGGATCTTCTGATACGAGTATTGGAGAGTTTGTATTGAAACTGGTCAGT TACCGAACCGAACAGAATTTTTGTGGATGA
AA sequence Show only first row Show all	>Lus10009417 pacid=23142605 polypeptide=Lus10009417 locus=Lus10009417.g ID=Lus10009417.BGIv1.0 annot-version=v1.0 MGLNQFSNTEKAGYVLINMFYELEKEPPKSVIYVAFGNMVTFNHTQMTELASGLKRTYKHIMWVICDTELAELPTDFASYLGDKTSGLVGCFFTHCEWNL MKALSLGIPMVASPQWSGQPPNAMLAEQVWKVGVRGRVGEDGIVSGDEVEIRCVREVMEGEIGKEIRSNCEKWKDLACLAISEGGSSDTSIGEFVLKLVS YRTEQNFCG

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05680		UGT74E2	Uridine diphosphate glycosyltr...		Lus10009417 [exp]	0	1
AT1G14220			Ribonuclease T2 family protein...		Lus10035882 [exp]	4.0	0.7979
AT2G02990		RNS1, ATRNS1	ribonuclease 1 (.1)		Lus10035881 [exp]	6.3	0.7918
					Lus10033874 [exp]	8.8	0.7492
AT3G63410		VTE3, APG1, IEP...	VITAMIN E DEFECTIVE 3, INNER E...		Lus10014711 [exp]	11.2	0.7432
AT1G49570			Peroxidase superfamily protein...		Lus10023858 [exp]	12.6	0.7698
AT5G04350			Plant self-incompatibility pro...		Lus10029381 [exp]	14.1	0.7549
AT4G35690			Arabidopsis protein of unknown...		Lus10028382 [exp]	15.0	0.7398
AT5G45890		SAG12	senescence-associated gene 12 ...		Lus10004781 [exp]	24.4	0.7894
AT5G39190		ATGER2, GLP2A	GERMIN-LIKE PROTEIN 2A, A. THA...		Lus10004780 [exp]	26.4	0.7745
AT2G25270			unknown protein		Lus10014341 [exp]	29.3	0.7162

Compare expression of checked genes

Lus10009417 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.