Lus10009444 [FLAX]

| External link |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Poplar homologues |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Lus10009444 pacid=23149737 polypeptide=Lus10009444 locus=Lus10009444.g ID=Lus10009444.BGIv1.0 annot-version=v1.0
ATGGCGATCGAAGAAGCGGTCAATGGGAGGGATGACATGGTAATCGATGGGCAGAATGCTGACCAGGCCGTCCAAAATGGATTCAACCCGATTTTCCTCA
GACTGTACTACGCAAAACTATTCCCTTCTGGCGATTTCTTCAAATGGTTGTCCTATGGGAATGATGGAAAGCATCCTGCTTGTGATAAATCTTACTTCGG
CAGGAGGGAATTCTCTTTCACCCTTGAGAATGACATCTATTTACGGTTTCTGTCATTCAACACTGCTTCGGAGTTGGAAAATGGCATCAGAGAGAAGTGT
CCATTCAAAATTGACATCGGTCCTGTTTATAGTGTCGATCCTGCTAAAAGGCATGCATATGCACAAGGTGGTGACAATGTTTTCAAACCAGTGGAGAGGG
AGCTAGTATTTGATATTGATATTACAGACTATGATGATGTCAGATATTGCTGCTCAGGAGCTGATGTTTGCCTGGATTGCTGGCCCTTGATGACAGCTGC
TATCAAAGTTATAGATACTTCACTCAGAGATGACTTTGGTTTCAACCACATCCTCTGGGTTTATAGTGGCCGACGTGGTGTGCATTGTTGGGTTTCTGAT
GGGAAAGCAAGAAGAGCTCAAATGCACTGCTTCAGGTTGACCAATGAACAGAGAGCATCCATTGCTGATTACTTCCGCGTATACAAGGGTAGTGAGAACA
GTAACAAAAAAGTTTCTTTGACTGGCCACGCTCTTCATCCTTTCTTGGTGAGATCATACTCAGAAGTACTAAAGGATCTATTTGAGAACCAATTGCTCTA
TAGTCAGCAAATTTTCTCAACTGAAGACAAATGTGAGAAGATTCTAGAGATGATTCCAGATGAATCTGTTGCTGCGGAGCTTCGAGGTAGGTGGCAGAAC
AGTAAAAGGTCGTATGGTTCGAGAGACGACATTAACTCTGTACGATGGGAGCAGCTGAAGCACACTCTGCAATCTGGAAGACACAAGGCACAAGGCTTAC
GTAGATGTATTGAAGAAATTGTGTTCTCTTTTTCCTATCCCAGGATTGATATGGAGGTCTCCAAACACATGAACCACTTGCTGAAGGCACCCTTCTGTGT
TCATCCAAAAACCGGACGTGTTTGTGTACCGATAGACCCAGCTCGTTGCCAAGAATTTGATCCTATAGCAGTTCCAACACTTTCACAGCTGCTACAGGAA
CTCAACACTGGAGGAATGGGCGAGGAAGGAGACAATGACTGGGACAGGACCTCACTCGGAGAATCCGTCAGGTTTTTCAGATCCTCGTTCCTGGAGCCTC
TTCTGAAATCCTGCAAGGAGTTCGATTGGGAGGCAGCAGTTAAGGAAATCGACGTGGCCTGCGAGAATGTGATTCCCTCCGCCTCTTCATTCAACCCAAA
CCGATCGGAGAATCGTGGTTGGGTTTCTGGGGGTGATTCGAATTGTTCCAATTCTTTTGTTACCAATGGGAAGCGGCCGTCTGGGAGCTGTAAACAGTCG
ACGCTTGATAGGTTCATTGGGACGGCGGGTCCTGTTCACCAGGCGAAGAAGTGGGTTGTTGAGGAAACTACTGATTCTCGGGTTCTGGGAGTGGGAGGGA
GCTGTGTTGAGATTGATTTCGAGGCAGCTAAAACTTGGATATATCCAGTTGCCTTGGCTGCTGCAGTGAATGTTCCACTTCGTGACTACCAGCTGGCCAT
AACGAGGACAGCATTGTTTTCAAATACATTGGTTGCATTGCCTACTGGACTTGGGAAGACACTTATTGCTGCAGTTGTCATGTACAATTACTTCCGATGG
TTTCCAGAAGGAAAGATTGTGTTTGCTGCCCCGTCTCGACCACTCGTAATTCAACAAATAGAAGCCTGTCATAATATAATGGGAATACCACAAGAGTGGA
CAATTGATATGACAGGCCAGATAGGTCCAGCAAAACGAGCAGGCTTTTGGAAATCTAAACGGGTTTTCTTTGTTACTCCCCAGGTTTTGGAGAAAGATAT
TCAAGCCGGAACATGTTTATGTAAAAGCCTTGTGTGCCTGGTAATTGATGAAGCTCATAGAGCGACGGGGAATTACTCATACTGTGTTGCAGTTCGTGAG
TTGATGGCTGTTCCAGTTGAGCTGCGGATATTGGCCCTGAGTGCTACCCCAGGATGTAATTACCTACAGCTTTATATTTTGCCAGTAATTTATTATGCGA
GCGAAACTGTGGGAAAGGATGCTGTTGACTTAAATAAACTGCTCTTGGATGTGATGCGCCCTTATGCTTCTAAGCTTTCTGCTGCCAGACTCCTGCCGAA
TAGAGACTTTCAAACTTTAAGTCCTCCGGATTTCCTCAATTCACGTGTTGAATTTCGCAAGGCACCCCCACAGAACCTTCCAGAGTATAAGATTAAAGAA
ATCGAAGCTTGTTTCGGATGTCTTATCACTCTTTATCACATACGGAAGCTACTTTCAAGCCATGGGATAAGGCCAGCATACGAGATGCTGGAAGAAAAGT
TGAAACAAGGACATTTTTTGAGGCTGATGAATAGAAATGAAGATATTAAAAAGGTAAAGCTCATTATGGAACAAAGCTTGAGCCATGGTGCACCTAGTCC
CAAGTTATCGAAAATGTTGGAAGTACTCGTTAACCATTTCGAAAGCAAGGATTCCCAGAACTCAAGGGTTATAATATTCTCAAATTTCAGAGGAAGTGTA
AGGGATATAATGAATTCTCTGGCCAGTATTGGTGACTTGGTGAAACCAACTGAGTTTATTGGTCAAAGTTCAGGAAAAACCTTGAAAGGCCAATCCCAGA
AGGTCCAACAAGCTATCTTGCAGAAATTTCGAGCTGGAGGGTACAATGTGATTGTCGCCACATCGATCGGTGAAGAGGGCCTGGATATAATGGAAGTTGA
TCTTGTCATATGTTTTGATGCTAACGTATCACCGCTCAGAATGATTCAGCGCATGGGGAGAACTGGACGGAAAAACGATGGAAGATTGTTCCTTGACGAT
ATCTCACTGGTTTTAGCATGCGAAGGAGCCGAATTGAAGTCTTATATGCGAAAACAAGCTTGCGGCAAGCATGTAGTGAAACACATGCATAATGGGGGAA
GAAATAGCTTTACATTTCACTCTAGTCCAAGGATGATTCCCCACATTTTCAAACCAGAAGTCCAGTATGTTCAGATGGAGATTGAACAATACGTTCCTCG
CGGAAAGAAAGTAAACGACGGTAGTGACGTCCGTACACCTGGATTCACTAAACAACTAACTGCTACTGAGAGTGCTGTGGTTGCAAAGTATTTCTGGGAT
GCATATTGGAGACCGTCTCTTATTGCCTTTCCAAGTGTCCAGACATATCCCTCCCGCATTCATCAAGTAATGCACTCGTGCAGAACAGAGATGCTGATAG
ACGCAATGCAAAATCTGGAGCCACTGTTAGTTCCTCCTGTGGATACCAGAGGTTTCTCTGTCAAGGTCTGCTTCGAGCAGGATGATGATACATTTTGCGA
AAAGGGTGTGGGCATCGAAAACGTTGATTATGAAGATGATGATAAAGAAGGTAACAAAATCCGTTTCTTACTTGCATTCTGCAACCACTGCTTCTTTTCA
GACTTTGGATGGGTATACGATTCCCCAGACAACTACTCAGAGGCCAACCAAAGCGATTGTGAAGAACTAATGGAACCCGAAGTGGCAACCAAGAGCCTTA
GTGTTTCGGTTGATTCCCTTGGGAAGGTCCTAAATTCTTATGTCCCTTCACTTCCTTTGAAATTGGCATCACATAATGGTGCTGCCTCGCTAACCTGTGA
AAAAGAAAGTCAACATTTGAAGACGACTTCTAATGACGGCTCCACCAGATTAGACGCCGTCGAAAATTTTGGCTCCGAAGTCCCAAAGACTGGAAATGCA
GAGCAAGATATGTTGAAAGGAGACTCTCTAGGCGATTGCTTTGTTGAAACTGGGATCAATGCACATTCTCCGAAAGTTGATGAGTACTGCAACAACAATT
ATGAAGATGCTGATCTCAGTCACCGATTAACTCCCATCCTGCGAAGTGGTGTCGTTCCCGAGTCTCCTATGAATGATGAATATGGTTTTGTTCCCGACTC
TCCTATGGATGATGAACATGGTATCGTTCCCGAGTCTCCTTTGAACAATGAACATGAATTGCTGAATGATACGGCAACCGAAGAAATTCTTGTTCCACAA
GATGTTACTACACCCATGAAACTGCATACTGGATTATTGCCAAAGTCTCCAAGAACTTGGAGAAATGAATCAAATGCACCTAATATAGTTGTTAATGCAG
ATATGGCTTGTCCCGTAATGAGTGATCAGATTCAGAACCCTTCACCTGAAAACACTGCTGGCAAATCAGACAGTGTTCAACCAGTACGAAGGCTCAAAAG
GCTTCGAAAAGTTGGAGAACTTGCAAAGGGTAAGAATTCAGGAAGCACTAGAGAAGACCGTTCTTTTCTCAATGAAACAAATGTTAATGGATCTGTCAGT
GGTACTATGCACAGAAATCAAACAAAACACGGGAGAGGTAACATACCAAGCATCAAACACGAAAAACTTGGTTATTCGTTCATCTGCAAACGTGACAGGC
ATGGCGGATACTTATTAGCAGTGCCATTTTCAGGTAAAAGGGAGCAGCATGGCATCATCAACGATTTCATAGAAGAGGAAGCCGAGGTCTCGCCAAATGG
TGAGGCATCTGACGACGAGATAGTCGATGGAGATGAAAATTCGTATGAACCGTGTTTCATAGATGACAGAATGAACCCCACACAGCCCAGTAGAGTGGAC
ATGATGGCAATGTACAGGCGTTCGTTGCTCAGTCAATCACCAATGCCCAGGGAATCCCCTTCAGCAGCAGCAGCCGTTTCTACTACTCCAGATTGTGACT
CTTCCATCAGCTGCAAAAACAACTCAGGATCTTCTTCTTCAGTTGTCCCTTGCTCAACAAGGAAACGGAAGTTAGGGGGAGGATCTGTTCTTCCCATTGT
CAACTTAGAGCAAGAATTCACAGCCGAGGCAACTAACAATAATAATGCTGCTGCTGATGTCGATATCGATGAGGATATGTTTTACGACGATCAGTTCTTT
GCCACCCTTGATGCACTGGAAGCACAAGCCTCATCTGTTCTTCAGCAGAAGAACAACACAAAGCCTGACATACTGCCTCCTCCTCCATCGTCAGTCCTGA
ATGACTCGGAACTTGATGGTTTGCCTATGTTCGATCTCGGCACGATTTCTGGGGCCAAAGTTAAGCCCAAAATTGTCTGGAAGGGTGTCGAAAATGGATT
ACAGGCTGATAAGGTAACTTATACCATTCTAATGTGTGAGCATTTCCGACAGGCTAATTACAAGCGTGGCATTGCGATGTTCAGTAAGATATTTAAACAC
GGGTTCGAACACGACATGCATACGTATAATGCACTGATTGCTGGTAGCTGCAGGCAGAAAAAGATGAACGAAAGTGAGAAGTTCTTAGAAGAAGCTACTA
GTCTTGGTTTAGTTCCTACCAAGGAAACATACACTTCCATGATTTGTGGATATTGTCGTGATGGAAAGGTCAATTTGGCTGTGAAAATTTTCAACAGGAT
GATGCATGATCGTCGCTGTTCACCCGATTGTTTTACTTATGGAGCTCTAATCAGTGGGCTCTGCAAAGAGTCCAAGCTGGATGATGCTCGTCGGTTGTAT
GACATAATGATCGACTGCGGTCTGTCCCCATCCGAAGTAACTCGGGTGACACTAGCGTATGAGTACTTCAAGCTGGATGATTCTGCAACTGCAATAATCA
TCATGGAGCGCTTAGATAAAAAACTATGGATTCGTACTGCTACCACGCTGATTAGGAAGCTTTGCAGTGAGAAGAAAGTCGGGATTGCATCACTGCTGTT
TCATAAATTGCTCGACAAGGATTCCAACGTGGTCGATTGTGTGACTTTGACTGCCTTTAGAACAGCTTGCTATGAGAGTGAGAAGTTTGCTTTAGTCGCT
GAGTTGTCGAAGAGAATATCTGGTTAG
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Lus10009444 pacid=23149737 polypeptide=Lus10009444 locus=Lus10009444.g ID=Lus10009444.BGIv1.0 annot-version=v1.0
MAIEEAVNGRDDMVIDGQNADQAVQNGFNPIFLRLYYAKLFPSGDFFKWLSYGNDGKHPACDKSYFGRREFSFTLENDIYLRFLSFNTASELENGIREKC
PFKIDIGPVYSVDPAKRHAYAQGGDNVFKPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTSLRDDFGFNHILWVYSGRRGVHCWVSD
GKARRAQMHCFRLTNEQRASIADYFRVYKGSENSNKKVSLTGHALHPFLVRSYSEVLKDLFENQLLYSQQIFSTEDKCEKILEMIPDESVAAELRGRWQN
SKRSYGSRDDINSVRWEQLKHTLQSGRHKAQGLRRCIEEIVFSFSYPRIDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPARCQEFDPIAVPTLSQLLQE
LNTGGMGEEGDNDWDRTSLGESVRFFRSSFLEPLLKSCKEFDWEAAVKEIDVACENVIPSASSFNPNRSENRGWVSGGDSNCSNSFVTNGKRPSGSCKQS
TLDRFIGTAGPVHQAKKWVVEETTDSRVLGVGGSCVEIDFEAAKTWIYPVALAAAVNVPLRDYQLAITRTALFSNTLVALPTGLGKTLIAAVVMYNYFRW
FPEGKIVFAAPSRPLVIQQIEACHNIMGIPQEWTIDMTGQIGPAKRAGFWKSKRVFFVTPQVLEKDIQAGTCLCKSLVCLVIDEAHRATGNYSYCVAVRE
LMAVPVELRILALSATPGCNYLQLYILPVIYYASETVGKDAVDLNKLLLDVMRPYASKLSAARLLPNRDFQTLSPPDFLNSRVEFRKAPPQNLPEYKIKE
IEACFGCLITLYHIRKLLSSHGIRPAYEMLEEKLKQGHFLRLMNRNEDIKKVKLIMEQSLSHGAPSPKLSKMLEVLVNHFESKDSQNSRVIIFSNFRGSV
RDIMNSLASIGDLVKPTEFIGQSSGKTLKGQSQKVQQAILQKFRAGGYNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNDGRLFLDD
ISLVLACEGAELKSYMRKQACGKHVVKHMHNGGRNSFTFHSSPRMIPHIFKPEVQYVQMEIEQYVPRGKKVNDGSDVRTPGFTKQLTATESAVVAKYFWD
AYWRPSLIAFPSVQTYPSRIHQVMHSCRTEMLIDAMQNLEPLLVPPVDTRGFSVKVCFEQDDDTFCEKGVGIENVDYEDDDKEGNKIRFLLAFCNHCFFS
DFGWVYDSPDNYSEANQSDCEELMEPEVATKSLSVSVDSLGKVLNSYVPSLPLKLASHNGAASLTCEKESQHLKTTSNDGSTRLDAVENFGSEVPKTGNA
EQDMLKGDSLGDCFVETGINAHSPKVDEYCNNNYEDADLSHRLTPILRSGVVPESPMNDEYGFVPDSPMDDEHGIVPESPLNNEHELLNDTATEEILVPQ
DVTTPMKLHTGLLPKSPRTWRNESNAPNIVVNADMACPVMSDQIQNPSPENTAGKSDSVQPVRRLKRLRKVGELAKGKNSGSTREDRSFLNETNVNGSVS
GTMHRNQTKHGRGNIPSIKHEKLGYSFICKRDRHGGYLLAVPFSGKREQHGIINDFIEEEAEVSPNGEASDDEIVDGDENSYEPCFIDDRMNPTQPSRVD
MMAMYRRSLLSQSPMPRESPSAAAAVSTTPDCDSSISCKNNSGSSSSVVPCSTRKRKLGGGSVLPIVNLEQEFTAEATNNNNAAADVDIDEDMFYDDQFF
ATLDALEAQASSVLQQKNNTKPDILPPPPSSVLNDSELDGLPMFDLGTISGAKVKPKIVWKGVENGLQADKVTYTILMCEHFRQANYKRGIAMFSKIFKH
GFEHDMHTYNALIAGSCRQKKMNESEKFLEEATSLGLVPTKETYTSMICGYCRDGKVNLAVKIFNRMMHDRRCSPDCFTYGALISGLCKESKLDDARRLY
DIMIDCGLSPSEVTRVTLAYEYFKLDDSATAIIIMERLDKKLWIRTATTLIRKLCSEKKVGIASLLFHKLLDKDSNVVDCVTLTAFRTACYESEKFALVA
ELSKRISG
|
DESeq2's median of ratios [FLAX]
Coexpressed genes
Lus10009444 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.