Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G15850 358 / 7e-124 JB67, FADB, ADS3, FAD5 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) AT1G06080 323 / 2e-111 ADS1 delta 9 desaturase 1 (.1) AT1G06120 323 / 5e-111 Fatty acid desaturase family protein (.1) AT1G06100 319 / 1e-109 Fatty acid desaturase family protein (.1) AT1G06090 315 / 3e-108 Fatty acid desaturase family protein (.1) AT3G15870 315 / 2e-107 Fatty acid desaturase family protein (.1) AT2G31360 305 / 5e-104 ADS2 16:0delta9 desaturase 2 (.1) AT1G06360 300 / 3e-102 Fatty acid desaturase family protein (.1) AT1G06350 298 / 3e-101 Fatty acid desaturase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10009469 [exp] 408 / 2e-144 AT3G15850 391 / 4e-136 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10001279 [exp] 401 / 1e-141 AT3G15850 387 / 2e-134 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10017773 [exp] 381 / 8e-134 AT3G15850 380 / 4e-132 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10041043 [exp] 379 / 8e-133 AT3G15850 372 / 1e-128 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10041042 [exp] 379 / 1e-132 AT3G15850 374 / 3e-129 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10006180 [exp] 374 / 1e-130 AT3G15850 370 / 5e-128 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10011488 [exp] 364 / 4e-126 AT3G15850 461 / 5e-163 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10023128 [exp] 348 / 1e-119 AT3G15850 458 / 1e-161 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Lus10019726 [exp] 323 / 2e-111 AT3G15850 319 / 1e-108 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G151700 [exp] 372 / 4e-129 AT3G15850 423 / 7e-148 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Potri.011G151800 [exp] 369 / 5e-128 AT3G15850 425 / 1e-148 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1) Potri.011G152100 [exp] 369 / 7e-128 AT3G15850 427 / 2e-149 FATTY ACID DESATURASE B, fatty acid desaturase 5 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00487 [flax] [poplar] FA_desaturase Fatty acid desaturase
Representative CDS sequence Show only first row Show all	>Lus10009470 pacid=23149693 polypeptide=Lus10009470 locus=Lus10009470.g ID=Lus10009470.BGIv1.0 annot-version=v1.0 ATGGAAGGGAGTCGCAAATGGAAGCCGCGGGACAAGATTGCAGCCGTGTACATAACGGCGACGCATCTGCTGGCACTTTGCTCGCCGTTTTGCTTCACAT GGGCTGCGTTTCGGGTTGCGGCCGTGACCGGGGTCTTCACGTCACTCTTCGGCATCAACCTCTCTTACCACCGGCATCTCACCCACCGGAGCTTCAAGAT CCCCAAGTGGCTCGAGTACTCCTTCGCTTACCTCGGCGTTCATGCTCTTCAGGGAGATCCGATATTTTGGGTGAGTAACCATAGGTTTCATCATCAATAT AGTGATACGGGAAAAGACCCACATAGCCCTGTTATGGGGTTTTGGTATAGTCATATGCGTTGGATTTTCAACATGGGTCTCGTAAGAGAGAAGATTGGGA AAAGAGACAATATTAGTGATCTGGAAAATCAAGCCTTTTATAGGTGGATTCGTTACACTTATTTCTTGCATCCCATGAGCCTTGCTATTCTCCTATACGC CATTGGTGGCACTTCCTATGTAATCTATGGAATGGGTTTGAGGGTGGTGTTAGCTTACCACGCTACATGGCTAGTCAACTCCGCCGGTCACACTTGGGGT ACTCGAATCTGGAAAACCAACGACTTGTCGCGAAATAACTGGTGGGTGGCGATGATGACATTTGGAGAAGGTTGGCACAACAATCACCATGCATTCAACT ATTCAGCAAAGCATGGGTTAGAATGGTGGCAAATTGATATAACTTGGTACTTGATCAAGTCCCTTGAATCTCTAGGGTTGGCTTATGATGTCAAGCTCCC AAGCCAAGCCCAAATGCACAAGTTGGCCATCAAGGAGGGTTGA
AA sequence Show only first row Show all	>Lus10009470 pacid=23149693 polypeptide=Lus10009470 locus=Lus10009470.g ID=Lus10009470.BGIv1.0 annot-version=v1.0 MEGSRKWKPRDKIAAVYITATHLLALCSPFCFTWAAFRVAAVTGVFTSLFGINLSYHRHLTHRSFKIPKWLEYSFAYLGVHALQGDPIFWVSNHRFHHQY SDTGKDPHSPVMGFWYSHMRWIFNMGLVREKIGKRDNISDLENQAFYRWIRYTYFLHPMSLAILLYAIGGTSYVIYGMGLRVVLAYHATWLVNSAGHTWG TRIWKTNDLSRNNWWVAMMTFGEGWHNNHHAFNYSAKHGLEWWQIDITWYLIKSLESLGLAYDVKLPSQAQMHKLAIKEG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G15850		JB67, FADB, ADS...	FATTY ACID DESATURASE B, fatty...		Lus10009470 [exp]	0	1
AT5G13620			unknown protein		Lus10017168 [exp]	2.6	1.0000
					Lus10027374 [exp]	3.2	1.0000
					Lus10025806 [exp]	8.3	1.0000
					Lus10026593 [exp]	10.2	1.0000
AT3G49210			O-acyltransferase (WSD1-like) ...		Lus10022417 [exp]	10.5	1.0000
AT4G13090		XTH2	xyloglucan endotransglucosylas...		Lus10025919 [exp]	11.7	1.0000
					Lus10022529 [exp]	12.0	1.0000
AT2G45200		ATGOS12, GOS12	golgi snare 12 (.1.2)		Lus10015880 [exp]	12.4	1.0000
					Lus10016867 [exp]	14.3	1.0000
					Lus10022172 [exp]	14.4	1.0000

Compare expression of checked genes

Lus10009470 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.