Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G27630 577 / 0 GTG2 GPCR-type G protein 2 (.1.2.3) AT1G64990 544 / 0 GTG1 GPCR-type G protein 1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020351 [exp] 662 / 0 AT4G27630 766 / 0.0 GPCR-type G protein 2 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G077700 [exp] 580 / 0 AT4G27630 691 / 0.0 GPCR-type G protein 2 (.1.2.3) Potri.019G042201 [exp] 52 / 6e-09 AT4G27630 61 / 4e-13 GPCR-type G protein 2 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF12430 [flax] [poplar] ABA_GPCR Abscisic acid G-protein coupled receptor PF12537 [flax] [poplar] GPHR_N The Golgi pH Regulator (GPHR) Family N-terminal
Representative CDS sequence Show only first row Show all	>Lus10009531 pacid=23145753 polypeptide=Lus10009531 locus=Lus10009531.g ID=Lus10009531.BGIv1.0 annot-version=v1.0 ATGGGATGGGGAATGGCGATATACGAAGGCGTGGTGGTTGTAGGCTCGCTCTGCCTGCTAGGCTGGGCGGGGCTCTGGTTCTTGAATCGCAGGCTGTACA AAGAGTACGAGGAGAAGAGAGTCCTGGTTCAGATCATTTTCAGTGTCGTCTTCGCCTTCTCCTGCAACCTCCTCCAGCTTGTGCTCTACGAGATCATCAA TTTCCTCTCGAAAGAGACGAGATGGATTAACTGGAAGGTGGATCTCTTCTGTCTAATTCTGTTGCTTGTCTTCTTATTGCCATACTATCATTGCTACTTG ATGCTCTGCAACAGTGGTGTAAGGAAAGAGCGAGCTGCACTTGGAGCTGTCTTGTTTGTACTGGCCTTTCTGTATGCTTTCTGGCGCATGGGCATTCACT TCCCGATGCCTTCTCCTGATAAAGGATTTTTTACCATGGCTCAGCTAGTAAGTAGAATTGGCGTCATTGGTGTGACTGTGATGGCTGTTTTATCTGGTTT TGGAGCTGTCAATTTACCATACAGTTATTTATCTCTCTTTATAAGAGAAATTGAGGAGACAGAAATCAAGGCACTGGAAAGACAATTGATGCATTCTATT GAGACCTGCATCACTAAGAAAAAGAAAATAATTCTCACACAAATGGAGATAGAGCGCATGCAAGGATCCGAGGAGGTACTTATTTTGTTTTGCTTGATTA CTCTGGTCATTCATGTAACCCTGTTAGGTGGGAAGCTGACCGTAGCTATCGGAAGTGTAAATAATTGGAAGACGAAAGCAATAGCTCTAGGAAGCATGAA CAATTGGAAGAAAAAACCCATTGAGGAATGGAATATTGAGTTGTTGCAAGTCACTCCGGACCTTGTGAAGCATCCCTTAGATATTAAGAACATGGAAGCA GAAGTACAAGCCTTGGAGGAGCTTTCAAAACAGCTGTTCCTAGAAATATATGAGCTGCGGCAAGCTAAGGAAGCGGCTGCTTTTTCTCGAACCTGGAGGG GACATATGCAAAATTTTCTTGGCTACGCATGTTCTGTTTATTGTGTGTATAAAATGATTAAGTCCTTGCAGAGTGTTATATTCAAAGAGGCCGGATCTGT CGATCCTGTTACAATGACAATCAGCATATTCTTACAGTTCTTCGACATCGGAATCAATGCTGCACTATTATCACAGTACATTTCTTTGATGTTCATCGGA CTGTTGATCGTCATATCAGTTCGTGGTTTCTTGTCAAACTTGATGAAGTTCTTCTTTGCCGTCTCCAGAGTCGGGAGTGGTTCCTCGAGCAACGTCGTGC TTTTCCTCTCCGAAATCATGGGAATGTACTTCCTCTCTTCCATTCTGCTGATAAGGAAAAGCTTAGCCACTGAATACCGGATGATCATAACTGACGTCTT GGGAGGGGATATCCAGTTCGACTTCTACCACAGATGGTTCGATGCAATCTTCGCAGCTAGCGCGTTCCTTTCTCTACTCTTGCTCTCTGCACATTACACG TCTCGCCAGACCGATAAACATCCCATTGATTGA
AA sequence Show only first row Show all	>Lus10009531 pacid=23145753 polypeptide=Lus10009531 locus=Lus10009531.g ID=Lus10009531.BGIv1.0 annot-version=v1.0 MGWGMAIYEGVVVVGSLCLLGWAGLWFLNRRLYKEYEEKRVLVQIIFSVVFAFSCNLLQLVLYEIINFLSKETRWINWKVDLFCLILLLVFLLPYYHCYL MLCNSGVRKERAALGAVLFVLAFLYAFWRMGIHFPMPSPDKGFFTMAQLVSRIGVIGVTVMAVLSGFGAVNLPYSYLSLFIREIEETEIKALERQLMHSI ETCITKKKKIILTQMEIERMQGSEEVLILFCLITLVIHVTLLGGKLTVAIGSVNNWKTKAIALGSMNNWKKKPIEEWNIELLQVTPDLVKHPLDIKNMEA EVQALEELSKQLFLEIYELRQAKEAAAFSRTWRGHMQNFLGYACSVYCVYKMIKSLQSVIFKEAGSVDPVTMTISIFLQFFDIGINAALLSQYISLMFIG LLIVISVRGFLSNLMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFLSSILLIRKSLATEYRMIITDVLGGDIQFDFYHRWFDAIFAASAFLSLLLLSAHYT SRQTDKHPID

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G27630		GTG2	GPCR-type G protein 2 (.1.2.3)		Lus10009531 [exp]	0	1
AT4G27630		GTG2	GPCR-type G protein 2 (.1.2.3)		Lus10020351 [exp]	1.0	0.9208
AT1G08420		BSL2	BRI1 suppressor 1 (BSU1)-like ...		Lus10004100 [exp]	4.2	0.8664
AT5G28850			Calcium-binding EF-hand family...		Lus10027963 [exp]	4.6	0.8353
AT2G40730		CTEXP	cytoplasmic tRNA export protei...		Lus10034240 [exp]	6.3	0.8352
AT1G15690		FUGU5, AtVHP1;1...	FUGU 5, ARABIDOPSIS THALIANA V...		Lus10008044 [exp]	8.0	0.7972
AT1G31780			unknown protein		Lus10035691 [exp]	14.1	0.8175
AT1G10950		AtTMN1	transmembrane nine 1 (.1)		Lus10015463 [exp]	16.0	0.8304
AT1G08420		BSL2	BRI1 suppressor 1 (BSU1)-like ...		Lus10013357 [exp]	16.7	0.8213
AT5G06560			Protein of unknown function, D...		Lus10012288 [exp]	16.7	0.8065
AT1G54220			Dihydrolipoamide acetyltransfe...		Lus10006877 [exp]	16.9	0.7827

Compare expression of checked genes

Lus10009531 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.