Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G69930 95 / 2e-25 ATGSTU11 glutathione S-transferase TAU 11 (.1) AT1G10370 94 / 3e-25 GST30B, ATGSTU17, ERD9 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) AT1G27130 94 / 4e-25 GST12, ATGSTU13 GLUTATHIONE S-TRANSFERASE 12, glutathione S-transferase tau 13 (.1) AT1G10360 87 / 1e-22 GST29, ATGSTU18 GLUTATHIONE S-TRANSFERASE 29, glutathione S-transferase TAU 18 (.1) AT1G69920 87 / 4e-22 ATGSTU12 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, glutathione S-transferase TAU 12 (.1) AT1G27140 84 / 3e-21 GST13, ATGSTU14 GLUTATHIONE S-TRANSFERASE 13, glutathione S-transferase tau 14 (.1) AT1G59700 81 / 5e-20 ATGSTU16 glutathione S-transferase TAU 16 (.1) AT1G59670 74 / 2e-17 ATGSTU15 glutathione S-transferase TAU 15 (.1) AT2G29450 61 / 1e-12 ATGSTU1, AT103-1A, ATGSTU5 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5 (.1) AT3G09270 59 / 7e-12 ATGSTU8 glutathione S-transferase TAU 8 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036688 [exp] 181 / 5e-59 AT1G10370 281 / 1e-96 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10029518 [exp] 170 / 3e-56 AT1G69930 96 / 3e-25 glutathione S-transferase TAU 11 (.1) Lus10037234 [exp] 171 / 2e-55 AT1G10370 285 / 2e-98 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10030805 [exp] 128 / 2e-38 AT1G10370 308 / 4e-107 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10030806 [exp] 119 / 5e-35 AT1G10370 290 / 4e-100 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10013282 [exp] 118 / 1e-34 AT1G10370 229 / 2e-76 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Lus10026722 [exp] 94 / 4e-27 AT1G69930 55 / 6e-11 glutathione S-transferase TAU 11 (.1) Lus10006525 [exp] 91 / 2e-25 AT1G69930 57 / 1e-11 glutathione S-transferase TAU 11 (.1) Lus10016471 [exp] 63 / 3e-13 AT2G29420 234 / 8e-78 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G032800 [exp] 111 / 8e-32 AT1G10370 303 / 3e-105 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.010G035500 [exp] 110 / 3e-31 AT1G10370 301 / 2e-104 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.013G072400 [exp] 61 / 2e-12 AT3G09270 161 / 2e-49 glutathione S-transferase TAU 8 (.1) Potri.016G023200 [exp] 57 / 3e-11 AT3G09270 189 / 1e-60 glutathione S-transferase TAU 8 (.1) Potri.010G070900 [exp] 57 / 8e-11 AT2G29420 221 / 9e-73 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.016G023340 [exp] 55 / 3e-10 AT2G29420 194 / 3e-62 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G061600 [exp] 54 / 7e-10 AT2G29420 172 / 7e-54 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.006G024200 [exp] 53 / 2e-09 AT2G29420 188 / 4e-60 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.008G175100 [exp] 52 / 3e-09 AT2G29420 169 / 1e-52 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.002G254000 [exp] 48 / 1e-07 AT2G29420 167 / 1e-51 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0497 [flax] [poplar] GST_C PF00043 [flax] [poplar] GST_C Glutathione S-transferase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10009746 pacid=23145164 polypeptide=Lus10009746 locus=Lus10009746.g ID=Lus10009746.BGIv1.0 annot-version=v1.0 ATGAAGGATCAGCTCAAAGAAGGACTAGCCCTGCTGGAAGAAGCCTATGTGAAGATCAGCAAAGGCAAAGAATTTTTCGGAGGGGAAATGATCGGGTTTT TGGACATTGCGTCTGGGAGCTTGTTGGGTTGGGTGGGAGCATTTTCAGCGATGATCGGGACTAATGTGATCAACGAGGAGTCAACTACTGGTCTGGCTAA ATGGGTTGAGAAATTCTCAGCTCATGTAGCTGTGAAAGATGTGATGCCTGAGACTGAGAAACTAGTCGAGTTTGCAAAGTTTATGGCTGCCAAGAGGAAA GAGTAA
AA sequence Show only first row Show all	>Lus10009746 pacid=23145164 polypeptide=Lus10009746 locus=Lus10009746.g ID=Lus10009746.BGIv1.0 annot-version=v1.0 MKDQLKEGLALLEEAYVKISKGKEFFGGEMIGFLDIASGSLLGWVGAFSAMIGTNVINEESTTGLAKWVEKFSAHVAVKDVMPETEKLVEFAKFMAAKRK E

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G10370		GST30B, ATGSTU1...	GLUTATHIONE S-TRANSFERASE U17,...		Lus10009746 [exp]	0	1
AT2G20540		MEF21	mitochondrial editing factor ...		Lus10007684 [exp]	1.0	0.6329
AT1G01970			Tetratricopeptide repeat (TPR)...		Lus10015865 [exp]	2.8	0.6070
AT1G11000		ATMLO4, MLO4	MILDEW RESISTANCE LOCUS O 4, S...		Lus10001292 [exp]	12.8	0.5869
AT2G32030			Acyl-CoA N-acyltransferases (N...		Lus10032323 [exp]	16.1	0.5901
AT1G71460			Pentatricopeptide repeat (PPR-...		Lus10006174 [exp]	29.3	0.5852
					Lus10024679 [exp]	35.9	0.5478
AT1G19090		CRK1, RKF2	CYSTEINE-RICH RLK \(RECEPTOR-L...		Lus10033389 [exp]	36.2	0.5154
AT4G33280	B3	REM16	AP2/B3-like transcriptional fa...		Lus10025388 [exp]	39.4	0.5408
AT5G42790		ARS5, ATPSM30, ...	ARSENIC TOLERANCE 5, proteasom...		Lus10007395 [exp]	40.2	0.5471
AT3G04950			unknown protein		Lus10022395 [exp]	44.9	0.5231

Compare expression of checked genes

Lus10009746 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.