Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G16260 47 / 2e-06 Wall-associated kinase family protein (.1.2) AT1G21270 47 / 4e-06 WAK2 wall-associated kinase 2 (.1) AT1G16090 46 / 4e-06 WAKL7 wall associated kinase-like 7 (.1) AT1G16160 46 / 7e-06 WAKL5 wall associated kinase-like 5 (.1) AT1G21250 44 / 3e-05 PRO25, WAK1 cell wall-associated kinase (.1) AT1G16130 44 / 3e-05 WAKL2 wall associated kinase-like 2 (.1) AT1G17910 43 / 5e-05 Wall-associated kinase family protein (.1) AT1G21240 42 / 0.0001 WAK3 wall associated kinase 3 (.1) AT1G21210 42 / 0.0001 WAK4 wall associated kinase 4 (.1) AT1G79670 40 / 0.0009 WAKL22, RFO1 RESISTANCE TO FUSARIUM OXYSPORUM 1, Wall-associated kinase family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013383 [exp] 235 / 2e-73 AT1G21270 427 / 4e-139 wall-associated kinase 2 (.1) Lus10013385 [exp] 140 / 1e-38 AT1G21270 437 / 2e-143 wall-associated kinase 2 (.1) Lus10013384 [exp] 135 / 9e-37 AT1G21270 430 / 3e-140 wall-associated kinase 2 (.1) Lus10008434 [exp] 122 / 2e-32 AT5G04885 796 / 0.0 Glycosyl hydrolase family protein (.1) Lus10038077 [exp] 64 / 5e-12 AT1G21270 576 / 0.0 wall-associated kinase 2 (.1) Lus10034085 [exp] 57 / 2e-09 AT1G16130 526 / 5e-179 wall associated kinase-like 2 (.1) Lus10003063 [exp] 49 / 8e-07 AT1G16130 514 / 2e-173 wall associated kinase-like 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G192500 [exp] 105 / 3e-26 AT1G16260 525 / 2e-177 Wall-associated kinase family protein (.1.2) Potri.009G154600 [exp] 103 / 6e-26 AT1G21270 447 / 2e-147 wall-associated kinase 2 (.1) Potri.004G192900 [exp] 102 / 2e-25 AT1G21270 458 / 1e-151 wall-associated kinase 2 (.1) Potri.004G192400 [exp] 102 / 2e-25 AT1G21270 466 / 2e-154 wall-associated kinase 2 (.1) Potri.009G154100 [exp] 101 / 3e-25 AT1G21270 437 / 2e-143 wall-associated kinase 2 (.1) Potri.004G192700 [exp] 101 / 6e-25 AT1G21270 464 / 4e-154 wall-associated kinase 2 (.1) Potri.004G192000 [exp] 100 / 6e-25 AT1G21270 379 / 2e-121 wall-associated kinase 2 (.1) Potri.009G154500 [exp] 97 / 9e-25 AT1G21270 98 / 5e-23 wall-associated kinase 2 (.1) Potri.004G191450 [exp] 100 / 1e-24 AT1G21270 474 / 7e-158 wall-associated kinase 2 (.1) Potri.009G157201 [exp] 99 / 2e-24 AT1G16260 500 / 4e-167 Wall-associated kinase family protein (.1.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10009751 pacid=23178325 polypeptide=Lus10009751 locus=Lus10009751.g ID=Lus10009751.BGIv1.0 annot-version=v1.0 ATGCAGATATCCGCAATTCTTCTCCTCCTTCTTCAATTAAGATTCATCTCTTCCGCCGACGTAATCTCCGACGACTGCTCCGACAAATGCGGCAACGTCA CTGTGTCGTACCCTTACGGAATCGGCGATCCCAAGTGCACAATCTCCTCCTCCTTCCTCTTCACCTGCAACTCCTCTGCCGGCGAGCCTCAACTGGTGTT CGGCCGTAACATCGCCGTACAGAACATCTCAATCGAAGAAGGAACCTTCTCCGACATCATGCTCGCCGCTTACCGCTGCTACAACGAGACCGGATCCATG GACTGTTTCCGGTTCAACCCGGCGATCACGCTCGGATCAGGGCCGTTTCGGTTCTCCAACGTGTACAACAAGCTCACTGCCTTCGGGTGCGACACTCTGG CATTCATGACCGACTCCCAAAAGCACTTTCGGCAGCGGGCTGCGTCTCCCTCTGCGACGACGTTTCCGCCGCCGTCAACATCTCCGCCGCCTCGAGGAAG AACTCCGATATCTGCTCCGGAATCGGCTGCTGCCAGAGCTCGATTCCTCTTGGATTGA
AA sequence Show only first row Show all	>Lus10009751 pacid=23178325 polypeptide=Lus10009751 locus=Lus10009751.g ID=Lus10009751.BGIv1.0 annot-version=v1.0 MQISAILLLLLQLRFISSADVISDDCSDKCGNVTVSYPYGIGDPKCTISSSFLFTCNSSAGEPQLVFGRNIAVQNISIEEGTFSDIMLAAYRCYNETGSM DCFRFNPAITLGSGPFRFSNVYNKLTAFGCDTLAFMTDSQKHFRQRAASPSATTFPPPSTSPPPRGRTPISAPESAAARARFLLD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G16260			Wall-associated kinase family ...		Lus10009751 [exp]	0	1
					Lus10038412 [exp]	2.0	0.8355
AT1G61440			S-locus lectin protein kinase ...		Lus10038413 [exp]	4.5	0.7938
AT1G74250			DNAJ heat shock N-terminal dom...		Lus10012524 [exp]	8.1	0.8025
AT3G47570			Leucine-rich repeat protein ki...		Lus10030634 [exp]	12.5	0.8180
AT2G06040			unknown protein		Lus10017169 [exp]	21.4	0.7758
AT2G23200			Protein kinase superfamily pro...		Lus10012646 [exp]	26.9	0.7620
					Lus10000834 [exp]	28.1	0.7549
AT1G45160			Protein kinase superfamily pro...		Lus10005470 [exp]	28.8	0.7695
AT4G12560		CPR1, CPR30	CONSTITUTIVE EXPRESSER OF PR G...		Lus10027322 [exp]	29.8	0.7028
AT3G15270	SBP	SPL5	squamosa promoter binding prot...		Lus10005548 [exp]	33.0	0.7591

Compare expression of checked genes

Lus10009751 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.