Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G10600 407 / 2e-137 CYP81K2 "cytochrome P450, family 81, subfamily K, polypeptide 2", cytochrome P450, family 81, subfamily K, polypeptide 2 (.1) AT5G10610 403 / 6e-136 CYP81K1 "cytochrome P450, family 81, subfamily K, polypeptide 1", cytochrome P450, family 81, subfamily K, polypeptide 1 (.1) AT4G37370 371 / 1e-123 CYP81D8 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) AT4G37320 359 / 4e-119 CYP81D5 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1) AT4G37360 343 / 2e-112 CYP81D2 "cytochrome P450, family 81, subfamily D, polypeptide 2", cytochrome P450, family 81, subfamily D, polypeptide 2 (.1) AT4G37330 339 / 3e-111 CYP81D4 "cytochrome P450, family 81, subfamily D, polypeptide 4", cytochrome P450, family 81, subfamily D, polypeptide 4 (.1) AT4G37340 338 / 8e-111 CYP81D3 "cytochrome P450, family 81, subfamily D, polypeptide 3", cytochrome P450, family 81, subfamily D, polypeptide 3 (.1) AT2G23190 337 / 6e-110 CYP81D7 "cytochrome P450, family 81, subfamily D, polypeptide 7", cytochrome P450, family 81, subfamily D, polypeptide 7 (.1) AT4G37430 335 / 9e-110 CYP81F1, CYP91A2 "cytochrome P450, family 91, subfamily A, polypeptide 2", CYTOCHROME P450 MONOOXYGENASE 81F1, cytochrome P450, family 91, subfamily A, polypeptide 2 (.1) AT5G36220 332 / 3e-108 CYP91A1, CYP81D1 CYTOCHROME P450 91A1, cytochrome P450, family 81, subfamily D, polypeptide 1, cytochrome p450 81d1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018717 [exp] 377 / 2e-125 AT4G37370 533 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10020437 [exp] 371 / 1e-123 AT4G37370 630 / 0.0 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10024819 [exp] 368 / 6e-122 AT4G37320 493 / 3e-171 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1) Lus10024820 [exp] 357 / 7e-118 AT5G36220 493 / 2e-171 CYTOCHROME P450 91A1, cytochrome P450, family 81, subfamily D, polypeptide 1, cytochrome p450 81d1 (.1) Lus10024816 [exp] 357 / 1e-117 AT4G37370 506 / 2e-176 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10011958 [exp] 354 / 7e-117 AT5G36220 548 / 0.0 CYTOCHROME P450 91A1, cytochrome P450, family 81, subfamily D, polypeptide 1, cytochrome p450 81d1 (.1) Lus10024818 [exp] 353 / 2e-116 AT4G37320 480 / 2e-166 "cytochrome P450, family 81, subfamily D, polypeptide 5", cytochrome P450, family 81, subfamily D, polypeptide 5 (.1) Lus10018711 [exp] 341 / 1e-111 AT4G37370 441 / 5e-151 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1) Lus10027614 [exp] 309 / 4e-100 AT4G37370 496 / 6e-174 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G021400 [exp] 523 / 0 AT5G10600 437 / 2e-149 "cytochrome P450, family 81, subfamily K, polypeptide 2", cytochrome P450, family 81, subfamily K, polypeptide 2 (.1) Potri.002G121900 [exp] 516 / 3e-180 AT5G10600 490 / 5e-170 "cytochrome P450, family 81, subfamily K, polypeptide 2", cytochrome P450, family 81, subfamily K, polypeptide 2 (.1) Potri.014G021700 [exp] 462 / 6e-159 AT5G10600 436 / 7e-149 "cytochrome P450, family 81, subfamily K, polypeptide 2", cytochrome P450, family 81, subfamily K, polypeptide 2 (.1) Potri.017G028100 [exp] 403 / 7e-136 AT5G10610 374 / 2e-124 "cytochrome P450, family 81, subfamily K, polypeptide 1", cytochrome P450, family 81, subfamily K, polypeptide 1 (.1) Potri.017G028200 [exp] 403 / 8e-136 AT5G10600 374 / 2e-124 "cytochrome P450, family 81, subfamily K, polypeptide 2", cytochrome P450, family 81, subfamily K, polypeptide 2 (.1) Potri.017G028450 [exp] 403 / 8e-136 AT5G10600 374 / 2e-124 "cytochrome P450, family 81, subfamily K, polypeptide 2", cytochrome P450, family 81, subfamily K, polypeptide 2 (.1) Potri.017G028150 [exp] 402 / 2e-135 AT5G10600 373 / 4e-124 "cytochrome P450, family 81, subfamily K, polypeptide 2", cytochrome P450, family 81, subfamily K, polypeptide 2 (.1) Potri.017G023850 [exp] 394 / 3e-132 AT5G10610 361 / 7e-120 "cytochrome P450, family 81, subfamily K, polypeptide 1", cytochrome P450, family 81, subfamily K, polypeptide 1 (.1) Potri.002G121200 [exp] 382 / 4e-128 AT4G37340 465 / 1e-160 "cytochrome P450, family 81, subfamily D, polypeptide 3", cytochrome P450, family 81, subfamily D, polypeptide 3 (.1) Potri.002G121400 [exp] 380 / 6e-127 AT4G37370 470 / 1e-162 "cytochrome P450, family 81, subfamily D, polypeptide 8", cytochrome P450, family 81, subfamily D, polypeptide 8 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [flax] [poplar] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Lus10009909 pacid=23150087 polypeptide=Lus10009909 locus=Lus10009909.g ID=Lus10009909.BGIv1.0 annot-version=v1.0 ATGGCGATGGAGTCCTTCTACTTGGCCATCATCGTCTTCTTCCTCAGCTTAATTCTGAGGCGTTGGATCATCAAACATGATCCCAAACTTCTGCCACCGT CTCCCTTATCCTTCCCAATAATCGGACATCTCCACCTCATCAAGCCCCCACTCTACCGATCCTTCCACACACTCACCCAACGCTACGGTCCAATCCTATT CCTCAAACTCGGCTGCCGCCCCGTTCTCGTCCTCTCCTCGCCGTCCGTCGTCGAAGAATGCTTCAACAAAAACGACGTCGTCTTTGCCAACCGCCCCAAA ACAATTTCAGCCGAATACTTCACTTACAACTACAAAACTCAAGTCTGGGCGCCCTACGGCCACCTCTGGCGAACTCTCCGCCGCTTCACCGTCACGGAGA TCTTCTCCCGGAAGACGATTCAAAAATCCTCCGCCGTCCGGGAACAAGAGGTGCGCTCCTTGATCCGCCGTCTGGCCAATAAAGGATCCAACGATTGGAC AGTAGTGAATCTCAAGTTCCTGCTGTCTCTTATGACGGCTAATGTCATGATGAGGCTGGCTGTGGGGCGGCGGTGCGTGGAAGAGGAAGAGGCGGGGACG GAGGAGGAAGTGGTTAAGTTTAGGGAGTTTAAGGAGAGGTTTTTCCCCAGCTTGGGGATGAACATCTGCGATTTTGTCCCGGTGTTGAGGACGATTGGGT ACGGTGGGATTGAGAAGAATATGATGAAATTGCAGAAACGGAGAAATGATTACTTGGAGCGGTTGTTGGATGGAGTGGTGATCAAGAGAAGGGCAAGATC GGAAATAAAAAGATCTAAGGGAGATGATGAAGAGGTGGAGTCGTTAGCCGAGATCATCTTATCGTTGCGAGAATCGGATCCTGACTTCTACACCGACGAT ATTCTCAAAAGTACTATTATGATGATGTTTGTAGCGGGAACAGAGACATCATCAATAACTCTGGAATGGGCAATGGCGCTTCTGTTGGACTACCCAGAAG CGATGAACAAGTTAAAGACAGAAATCGACACCAACATCGGGGGAAGTAGACTAATGAACGAACAAGACATGGTCAAACTACCTTACCTGAAATGTGTGAT AAACGAGACACTGAGATTATACCCGCCTGCTCCACTTCTATTACCCCATTGTTCATCTGAAGACTGCACCCTGCAAGGATACCACATCCCAAAGGACACC ATTCTAATGGTGAACGTGTGGGCGATGCAAAGGGATCCCAAGTTGTGGAAAGAAGCAGATAAGTTCATGCCTGAGAGATTTGAGGTGGATGATATGGAGA GTGAATTAGGAGAAGGAGAAGGAGGATGCAAATATGCTCCATTTGGGTTGGGGAGGAGAGCTTGTCCAGGTGCAGCAATGGGGATGAACTTGGTTTCTCT GGCTTTAGCATCTTTAGTTCAATGCTTTGAATGGGAGAAAGTTGGGGCAGAGGTGGAAGATATGAGTGCTGGTCCTGGAATTGCTCTGTTTAAGAATAAG CCTCTGGAGGCTAAGTGTACTCCCCGTTGTGATTTGGTTAAGCTTTTATCTCTTGTTTAG
AA sequence Show only first row Show all	>Lus10009909 pacid=23150087 polypeptide=Lus10009909 locus=Lus10009909.g ID=Lus10009909.BGIv1.0 annot-version=v1.0 MAMESFYLAIIVFFLSLILRRWIIKHDPKLLPPSPLSFPIIGHLHLIKPPLYRSFHTLTQRYGPILFLKLGCRPVLVLSSPSVVEECFNKNDVVFANRPK TISAEYFTYNYKTQVWAPYGHLWRTLRRFTVTEIFSRKTIQKSSAVREQEVRSLIRRLANKGSNDWTVVNLKFLLSLMTANVMMRLAVGRRCVEEEEAGT EEEVVKFREFKERFFPSLGMNICDFVPVLRTIGYGGIEKNMMKLQKRRNDYLERLLDGVVIKRRARSEIKRSKGDDEEVESLAEIILSLRESDPDFYTDD ILKSTIMMMFVAGTETSSITLEWAMALLLDYPEAMNKLKTEIDTNIGGSRLMNEQDMVKLPYLKCVINETLRLYPPAPLLLPHCSSEDCTLQGYHIPKDT ILMVNVWAMQRDPKLWKEADKFMPERFEVDDMESELGEGEGGCKYAPFGLGRRACPGAAMGMNLVSLALASLVQCFEWEKVGAEVEDMSAGPGIALFKNK PLEAKCTPRCDLVKLLSLV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G10600		CYP81K2	"cytochrome P450, family 81, s...		Lus10009909 [exp]	0	1
AT5G27830			unknown protein		Lus10029881 [exp]	2.0	0.9570
AT4G24220		5[beta]-StR, 5[...	VEIN PATTERNING 1, Δ4,5-s...		Lus10000076 [exp]	2.4	0.9505
AT4G32190			Myosin heavy chain-related pro...		Lus10006190 [exp]	4.5	0.9407
AT1G55510		BCDH BETA1, BCD...	branched-chain alpha-keto acid...		Lus10013401 [exp]	4.6	0.9426
AT1G10600		AMSH2	associated molecule with the S...		Lus10030875 [exp]	4.9	0.9380
AT5G56550		ATOXS3	oxidative stress 3 (.1)		Lus10038265 [exp]	6.9	0.9306
AT3G07310			Protein of unknown function (D...		Lus10025896 [exp]	7.1	0.9390
AT5G18650			CHY-type/CTCHY-type/RING-type ...		Lus10012811 [exp]	9.5	0.9279
AT2G24100		ASG1	ALTERED SEED GERMINATION 1, un...		Lus10024097 [exp]	9.9	0.9240
AT4G28240			Wound-responsive family protei...		Lus10031617 [exp]	11.5	0.9095

Compare expression of checked genes

Lus10009909 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.