Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013409 [exp] 102 / 1e-28 AT1G55365 87 / 9e-23 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G003500 [exp] 39 / 0.0002 AT5G56520 72 / 1e-17 unknown protein Potri.003G221500 [exp] 38 / 0.0005 AT5G56520 79 / 2e-20 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10010316 pacid=23169527 polypeptide=Lus10010316 locus=Lus10010316.g ID=Lus10010316.BGIv1.0 annot-version=v1.0 ATGGTGTTTAGCAGCGTCCTCGTTCTATCAGTAGCTCACGTGTCTGCTGAGGCATGTCAGCAGATTTCTTGCCTCCGATTGCAACACCGCCGCCGCCTCA CTGCTCCTCAGCTCCTTGATCTCCTCTGCTGCCTCCCTCTCCATCAACTCGGCCGCTTCGCTCTCTGCCTCTGGTCTTTCCTCTGCTTGCCACCGCCCGA TTCCTTCTACTCCTACTCTTACTATTCTTCTTCCTCTTCCTCTTCCGATGACGACGACTCTGACGGCGGCGATTTCGTGGTGGTTCGTTTCCACAATCAA CTCAGAGGAGACGGAGCTTCATCCTCTTACTCAGCTGATTCCGCTGCCGGTTCTCCTTCCTCCTCCCCTATTCGTATGGATGATTACTACCATCACTCGC ACTCTGATTGA
AA sequence Show only first row Show all	>Lus10010316 pacid=23169527 polypeptide=Lus10010316 locus=Lus10010316.g ID=Lus10010316.BGIv1.0 annot-version=v1.0 MVFSSVLVLSVAHVSAEACQQISCLRLQHRRRLTAPQLLDLLCCLPLHQLGRFALCLWSFLCLPPPDSFYSYSYYSSSSSSSDDDDSDGGDFVVVRFHNQ LRGDGASSSYSADSAAGSPSSSPIRMDDYYHHSHSD

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G55365			unknown protein		Lus10010316 [exp]	0	1
AT4G35760			NAD(P)H dehydrogenase (quinone...		Lus10041842 [exp]	1.4	0.8391
AT2G29700		ATPH1	pleckstrin homologue 1 (.1)		Lus10040681 [exp]	1.4	0.8418
AT4G27540		PRA1.H	prenylated RAB acceptor 1.H (....		Lus10042863 [exp]	3.2	0.7520
AT5G19590			Protein of unknown function, D...		Lus10033088 [exp]	6.3	0.7651
AT5G19910		MED31	SOH1 family protein (.1.2)		Lus10021434 [exp]	10.2	0.7145
AT1G26920			unknown protein		Lus10037195 [exp]	12.0	0.7688
AT5G65200		ATPUB38	ARABIDOPSIS THALIANA PLANT U-B...		Lus10043464 [exp]	15.9	0.7387
AT1G16840			unknown protein		Lus10035733 [exp]	17.7	0.7514
AT4G40045			unknown protein		Lus10034155 [exp]	19.5	0.7378
AT1G16840			unknown protein		Lus10037317 [exp]	30.2	0.6845

Compare expression of checked genes

Lus10010316 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.