Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05675 368 / 6e-124 UDP-Glycosyltransferase superfamily protein (.1) AT1G05680 364 / 2e-122 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G43820 323 / 1e-106 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G31790 319 / 6e-105 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 316 / 1e-103 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G43840 311 / 8e-102 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT1G24100 283 / 1e-90 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT1G05530 222 / 2e-67 UGT75B2, UGT2 UDP-GLUCOSYL TRANSFERASE 2, UDP-glucosyl transferase 75B2 (.1) AT1G05560 221 / 6e-67 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT3G21560 214 / 6e-64 UGT84A2 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003809 [exp] 731 / 0 AT1G05675 337 / 1e-111 UDP-Glycosyltransferase superfamily protein (.1) Lus10039041 [exp] 533 / 0 AT1G05675 343 / 3e-114 UDP-Glycosyltransferase superfamily protein (.1) Lus10024118 [exp] 396 / 1e-134 AT1G05675 375 / 2e-126 UDP-Glycosyltransferase superfamily protein (.1) Lus10024117 [exp] 392 / 9e-133 AT1G05675 385 / 4e-130 UDP-Glycosyltransferase superfamily protein (.1) Lus10008742 [exp] 362 / 2e-121 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006352 [exp] 354 / 3e-118 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10024486 [exp] 333 / 3e-110 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10020559 [exp] 333 / 5e-110 AT2G43820 436 / 3e-150 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006353 [exp] 329 / 1e-108 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G032300 [exp] 402 / 6e-137 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.007G140300 [exp] 396 / 5e-135 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 395 / 3e-134 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 395 / 3e-134 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.004G179300 [exp] 394 / 4e-134 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032500 [exp] 390 / 1e-132 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.001G389200 [exp] 371 / 5e-125 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.014G175000 [exp] 341 / 2e-113 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.015G071900 [exp] 332 / 9e-110 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.007G140500 [exp] 329 / 8e-109 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10010468 pacid=23154093 polypeptide=Lus10010468 locus=Lus10010468.g ID=Lus10010468.BGIv1.0 annot-version=v1.0 ATGACTCTGTCACTAAAAGAAAAAGCTTCAGTCACAAAAAATCCTCATGTTGTCGTTATACCATGGCCAGCAATGGGCCACATAAACCCAGCGGCTCAGT TCTCCAAAATTATGGTCGCTAAAGGTCTATCCGTCACCATGTTAATCTTCTCCGAGAAAAAGCTCTTCCGCAAGGACTCCGGTCCGGTCGCCGTCGAGCA GATCTCCGACGAGGGGATCCTCTCTGAACCAATCGCTGAGGACTACTACGAGAAGTACCGCATCCTGGTCTGCCAGGAGCTGCCGAAGGTCATCGATGGG ATGGTCGCCGGAGGACTGCAGCGGCCGTGCTGCGTGGTGTACGATTCGCTGTTTCCGTGGATATTACCGACGGTGAAGGAGCTTGGGATGATGGGGGCGC CGTTCTTCACGCAGCCCATGGCTGTTAACGCCGTGTACTTGAACGTGATGGAAGGGAGGCCAGCGGCGGAGGGGTTTCCGGCGGAGATGGACGCCGCCGG TGATCTGCCGTCTTTTGTTACTGACTTGGATACTTACCCGGGGACTTTGGAGATCATGACGGGGCAGCTTCGTAATATTGGGGAAGCTGATTGGGCGTTT TGTAATACTTTTTATAGCTTGGAAGAAAAGCTGGTCAATTGGATGGCTAAATATTCTATCAAAATCAAACCAGTGGGTCCTACAATCCCGACCACATATA TTAGCAAAGAGAAATCATTTGAAACGATGACGGAATATGGCGTTTCCCTCTTCAGTCAAACCGATTCACAAGCTAGCATTAACCAATGGCTCGACACAAA ACTAGCCGGTTCGGTCATCTATGCTTCGTTGGGTAGCATATCAGACATATCTAAAAGCCAAATAACCGAAATGGCCCAAGCCCTCCACCTTAGTAGCCAC CCATTCCTATGGGTGGTTCGAGAATCCGAACAGGTAAAGCTTCCACCCGATTTCGTCTCCGACGACACGACACACTTGGTTGTGGAGTGGTGCCGCCAGC TGGAGGTCCTAGCTCACCCATCTATCGGCTGCTTCGTGACCCACTGTGGGTGGAACTCAACGATAGAGGCAATAAGCCTTGGAGTGCCGATGGTGACGTT TCCCATCTGGGTAGACCAACCGACCAACGCAAAGTTCGTGGGGGATGTTTGGCATGTGGGGGCACGTGCGAAGGCGGATGTGACAAGTGGCGTGGTCACG AAGGAAGAAATCGGACGGCGGATCAAGGAAGTGATGGAAGGAGAGAGTGGGGAGGATATGAGGAGGAATGTGGAGAAATGGAAGAGATTAGCCCGTGAAG CTATCGTCGATGGTGGGAGCTCGGATAGGAATATTGACGAGTTTGTGAAGGCCCTAAAACAACGTTGA
AA sequence Show only first row Show all	>Lus10010468 pacid=23154093 polypeptide=Lus10010468 locus=Lus10010468.g ID=Lus10010468.BGIv1.0 annot-version=v1.0 MTLSLKEKASVTKNPHVVVIPWPAMGHINPAAQFSKIMVAKGLSVTMLIFSEKKLFRKDSGPVAVEQISDEGILSEPIAEDYYEKYRILVCQELPKVIDG MVAGGLQRPCCVVYDSLFPWILPTVKELGMMGAPFFTQPMAVNAVYLNVMEGRPAAEGFPAEMDAAGDLPSFVTDLDTYPGTLEIMTGQLRNIGEADWAF CNTFYSLEEKLVNWMAKYSIKIKPVGPTIPTTYISKEKSFETMTEYGVSLFSQTDSQASINQWLDTKLAGSVIYASLGSISDISKSQITEMAQALHLSSH PFLWVVRESEQVKLPPDFVSDDTTHLVVEWCRQLEVLAHPSIGCFVTHCGWNSTIEAISLGVPMVTFPIWVDQPTNAKFVGDVWHVGARAKADVTSGVVT KEEIGRRIKEVMEGESGEDMRRNVEKWKRLAREAIVDGGSSDRNIDEFVKALKQR

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05675			UDP-Glycosyltransferase superf...		Lus10010468 [exp]	0	1
AT4G32480			Protein of unknown function (D...		Lus10039838 [exp]	6.6	0.9101
AT5G07220		ATBAG3	BCL-2-associated athanogene 3 ...		Lus10023279 [exp]	6.7	0.9520
AT2G47180		ATGOLS1	galactinol synthase 1 (.1)		Lus10029145 [exp]	7.7	0.9473
AT5G61750			RmlC-like cupins superfamily p...		Lus10022071 [exp]	10.7	0.9511
					Lus10018095 [exp]	11.0	0.9281
AT1G14185			Glucose-methanol-choline (GMC)...		Lus10030457 [exp]	11.7	0.9448
AT3G57450			unknown protein		Lus10029496 [exp]	11.8	0.9405
AT5G02090			unknown protein		Lus10010878 [exp]	12.2	0.9439
AT1G10880			Core-2/I-branching beta-1,6-N-...		Lus10026386 [exp]	14.5	0.9338
AT5G47635			Pollen Ole e 1 allergen and ex...		Lus10038781 [exp]	15.9	0.9359

Compare expression of checked genes

Lus10010468 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.