Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05675 147 / 4e-41 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 145 / 1e-40 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G31790 143 / 7e-40 UDP-Glycosyltransferase superfamily protein (.1) AT1G05680 142 / 2e-39 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G43820 141 / 6e-39 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT2G43840 136 / 4e-37 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT1G24100 128 / 4e-34 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT1G05560 122 / 6e-32 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT1G05530 118 / 2e-30 UGT75B2, UGT2 UDP-GLUCOSYL TRANSFERASE 2, UDP-glucosyl transferase 75B2 (.1) AT4G15550 116 / 8e-30 IAGLU indole-3-acetate beta-D-glucosyltransferase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039041 [exp] 189 / 5e-57 AT1G05675 343 / 3e-114 UDP-Glycosyltransferase superfamily protein (.1) Lus10010468 [exp] 182 / 1e-54 AT1G05675 368 / 7e-124 UDP-Glycosyltransferase superfamily protein (.1) Lus10003809 [exp] 182 / 1e-54 AT1G05675 337 / 1e-111 UDP-Glycosyltransferase superfamily protein (.1) Lus10024117 [exp] 159 / 2e-45 AT1G05675 385 / 4e-130 UDP-Glycosyltransferase superfamily protein (.1) Lus10006351 [exp] 147 / 1e-42 AT1G05680 315 / 9e-106 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10024118 [exp] 149 / 6e-42 AT1G05675 375 / 2e-126 UDP-Glycosyltransferase superfamily protein (.1) Lus10010712 [exp] 149 / 9e-42 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1) Lus10006721 [exp] 143 / 7e-40 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 144 / 8e-40 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G140300 [exp] 156 / 1e-44 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032500 [exp] 151 / 7e-43 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 149 / 4e-42 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 149 / 4e-42 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.001G389200 [exp] 149 / 6e-42 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.004G179300 [exp] 149 / 6e-42 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.015G071900 [exp] 148 / 1e-41 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.017G032300 [exp] 148 / 1e-41 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.007G141900 [exp] 143 / 1e-41 AT1G05675 271 / 2e-89 UDP-Glycosyltransferase superfamily protein (.1) Potri.006G055600 [exp] 138 / 9e-38 AT4G15550 442 / 2e-152 indole-3-acetate beta-D-glucosyltransferase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10010469 pacid=23154105 polypeptide=Lus10010469 locus=Lus10010469.g ID=Lus10010469.BGIv1.0 annot-version=v1.0 ATGTTCCACGGGCGTGGACTCGAACAAAATCGGGGGTTTAAAGTAGAACAGGTCTCCGACGAGGAGATCCTCGAAAACCTCGAAGGGAACTTCCTCAAGA GATACGAAGACCTCATGATTCGCAAGCTGTTGAAGTTCGTAGGAGGCCATGCTGCACGGCCGTGCTTCGTGGTCTATGACTCATTGATGACGTGGGTATT AGGGACGGTAAAAGAGATTGGGATCATGGCGGCGCCGTTCTTCACGGAGTTTGTGGTGGTTAATGCGGTGTACTTGAACGTGTTGGAAGGGAGGGCGGCG GTGGATGGGTTTCCGGCGGATTTGGCGGCGGTAATGGAGGACGGTGATCTGCCGTCGTTTGTTCCGACAAGACTAACGGGTTCACGAATTTTCACTGTGC AATGGCTCAACTCGAAACCATCTAGTTCGGTCATCTATGCTTCCTTGGGCAGCATGGCTGGCATCTCCCAAGACCAAACAATCGAGCTAGCCCAAGCCTT ACACCTCAGTGGTCACCCGTTCATTTGGGTGGTTCGAGAATCCGAACAGGACAAACTTCCTATCGGTTTCACATCTAGTACGACGATTCTTGTCTTGGAC TGGTGTCACCAACTAGAGGTATTGGCTCATCGCTCAGTGGGATGCTTCGTGACCCACTCTGGGTGGAATTCGACGATGGAGGCGATTGGCATCGGAGTCC CCATGGTAGCATTACCAATTTGGACCGACCAGCCAACCAACGCAAAGTTTGTGGGGACATATGGTGTGTGGGAGCACGTGCAAAAAAACTAA
AA sequence Show only first row Show all	>Lus10010469 pacid=23154105 polypeptide=Lus10010469 locus=Lus10010469.g ID=Lus10010469.BGIv1.0 annot-version=v1.0 MFHGRGLEQNRGFKVEQVSDEEILENLEGNFLKRYEDLMIRKLLKFVGGHAARPCFVVYDSLMTWVLGTVKEIGIMAAPFFTEFVVVNAVYLNVLEGRAA VDGFPADLAAVMEDGDLPSFVPTRLTGSRIFTVQWLNSKPSSSVIYASLGSMAGISQDQTIELAQALHLSGHPFIWVVRESEQDKLPIGFTSSTTILVLD WCHQLEVLAHRSVGCFVTHSGWNSTMEAIGIGVPMVALPIWTDQPTNAKFVGTYGVWEHVQKN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05675			UDP-Glycosyltransferase superf...		Lus10010469 [exp]	0	1
					Lus10016118 [exp]	1.0	1.0000
AT4G02780		ATCPS1, ABC33, ...	GA REQUIRING 1, CPP synthase, ...		Lus10004323 [exp]	1.4	0.9631
AT5G17540			HXXXD-type acyl-transferase fa...		Lus10005660 [exp]	1.7	0.9216
AT5G39300		ATHEXPALPHA1.18...	EXPANSIN 25, expansin A25 (.1)		Lus10000305 [exp]	2.2	0.9029
AT5G06700		TBR	TRICHOME BIREFRINGENCE, Plant ...		Lus10033616 [exp]	2.4	0.7979
AT5G23540			Mov34/MPN/PAD-1 family protein...		Lus10012493 [exp]	2.8	0.7807
AT3G07880		SCN1	SUPERCENTIPEDE1, Immunoglobuli...		Lus10027327 [exp]	2.8	0.9168
AT2G14378			Protein of unknown function (D...		Lus10019428 [exp]	5.1	0.6897
					Lus10026491 [exp]	6.6	0.7277
AT2G43820		SGT1, ATSAGT1, ...	UDP-glucose:salicylic acid glu...		Lus10006352 [exp]	9.2	0.7886

Compare expression of checked genes

Lus10010469 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.