Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10010481 pacid=23154158 polypeptide=Lus10010481 locus=Lus10010481.g ID=Lus10010481.BGIv1.0 annot-version=v1.0 ATGGGTGGTGTCGGTATCGTTGGTGGCTCTTCTGGTGGTGTTGGTGTCTTTGGTGGCTCGACGGGCGGTGTCGGTATCTTTGGTGGCTCTTCTGGAGGTG TCGGTGTCTTTGGTGGCTCAACGGGTGGTGTCGGCGTCTTGGGTGGCTCAACAGGTGGAGTCGGCGTCTTAGGTGGCTCAACTGGTGGTGTTGGTGTCTT CGGTGGCTCAACCGGTGGTGTTGGCGTCTTCGGTGGCTCAACCGGTGGTGTCGGTGTCTTGGGGGGTTCAACCGGCGGTGTGGGCGGTTTTGTTGGCTCA ACAGGCGGGGTAGGTGTCTTCGGGGGTTCAACCGGCGGGGGGGGGATCTTTGGTGGCTCAACGGGTGGTGTCGGCGTCTTGGGTGGCTCAACAGGTGGAG TCGGCGTCTTAGGTGGCTCAACTGGTGGTGTTGGTGTCTTCGGTGGCTCAACCGGTGGTGTTGGCGTCTTCGGTGGCTCAACCGGTGGTGTCGGTGTCTT GGGGGGTTCAACCGGCGGTGTAGGTGTCTTGGGTGGCTCAACAGGCGGGGTAGGTGTCTTCGGGGGTTCAACCGGCGGTGTTGGCATCTTTGGTGGCTCA ACAGGCGGGGTAGGTGTCTTCGGGGGTTCAACCGGCGGTGTTGGCATCTTTGGTGGCTCAACAGGCGGGGTAGGTGTCTTCGGGGGTTCAACCGGCGGTG TTGGCATCTTTGGTGGCTCAACAGGCGGGGTAGGTGTCTTCGGGGGTTCAACCGGCGGTGTTGGCATCTTTGGTGGCTCAACAGGCGGGGTAGGTGTCTT CGGGGGTTCAACCGGCGGTGTTGGCATCTTTGGTGGCTCAACAGGCGGGGTAGGTGTCTTCGGGGGTTCAACCGGCGGTGTTGGCATCTTTGGTGGCTCA ACAGGCGGGGTAGGTGTCTTCGGGGGTTCAACCGGCGGTGTTGGCATCTTTGGTGGCTCAACAGGCGGGGTAGGTGTCTTCGGGGGTTCAACCGGCGGTG TTGGCATCTTTGGTGGCTCAACAGGCGGGGTAGGTGTCTTCGGGGGTTCAACCGGCGGTGTTGGCATCTTTGGTGGCTCAACAGGCGGGGTAGGTGTTCT TCAGCGGGCGTTGTTGTCTTCTTTGTTGGCTAAACCGGCGGTGTGGGTGTCTTGGGTGGCTCAACCGGTGGCTTCACAACTGGTGGCTTGGGGGAGTGCG GTGGCGGCTTAG
AA sequence Show only first row Show all	>Lus10010481 pacid=23154158 polypeptide=Lus10010481 locus=Lus10010481.g ID=Lus10010481.BGIv1.0 annot-version=v1.0 MGGVGIVGGSSGGVGVFGGSTGGVGIFGGSSGGVGVFGGSTGGVGVLGGSTGGVGVLGGSTGGVGVFGGSTGGVGVFGGSTGGVGVLGGSTGGVGGFVGS TGGVGVFGGSTGGGGIFGGSTGGVGVLGGSTGGVGVLGGSTGGVGVFGGSTGGVGVFGGSTGGVGVLGGSTGGVGVLGGSTGGVGVFGGSTGGVGIFGGS TGGVGVFGGSTGGVGIFGGSTGGVGVFGGSTGGVGIFGGSTGGVGVFGGSTGGVGIFGGSTGGVGVFGGSTGGVGIFGGSTGGVGVFGGSTGGVGIFGGS TGGVGVFGGSTGGVGIFGGSTGGVGVFGGSTGGVGIFGGSTGGVGVFGGSTGGVGIFGGSTGGVGVLQRALLSSLLAKPAVWVSWVAQPVASQLVAWGSA VAA

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10010481 [exp]	0	1
AT3G22142			Bifunctional inhibitor/lipid-t...		Lus10010482 [exp]	1.4	0.9883
					Lus10024084 [exp]	2.0	0.9763
					Lus10008816 [exp]	2.4	0.9826
AT3G19760		EIF4A-III	eukaryotic initiation factor 4...		Lus10040975 [exp]	3.5	0.9796
					Lus10041394 [exp]	3.5	0.9655
AT1G23070			Protein of unknown function (D...		Lus10036614 [exp]	3.7	0.9694
AT1G29930		LHCB1.3, CAB140...	LIGHT-HARVESTING CHLOROPHYLL A...		Lus10007362 [exp]	3.9	0.9749
AT3G61220		SDR1	short-chain dehydrogenase/redu...		Lus10014690 [exp]	6.0	0.9533
AT1G15260			unknown protein		Lus10037547 [exp]	6.3	0.9664
AT5G43745			Protein of unknown function (D...		Lus10039407 [exp]	6.6	0.9481

Compare expression of checked genes

Lus10010481 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.