Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G26250 555 / 0 Major facilitator superfamily protein (.1) AT3G05960 550 / 0 ATSTP6 sugar transporter 6 (.1) AT5G26340 493 / 3e-171 ATSTP13, MSS1, STP13 SUGAR TRANSPORT PROTEIN 13, Major facilitator superfamily protein (.1) AT1G07340 473 / 9e-164 ATSTP2 sugar transporter 2 (.1) AT1G50310 449 / 2e-154 ATSTP9 sugar transporter 9 (.1) AT3G19940 442 / 2e-151 Major facilitator superfamily protein (.1) AT4G02050 435 / 6e-149 STP7 sugar transporter protein 7 (.1) AT1G77210 418 / 2e-142 AtSTP14 sugar transport protein 14, sugar transporter 14 (.1.2) AT4G21480 416 / 1e-141 STP12 sugar transporter protein 12 (.1) AT5G23270 414 / 2e-140 ATSTP11, STP11 sugar transporter 11 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002452 [exp] 859 / 0 AT5G26250 655 / 0.0 Major facilitator superfamily protein (.1) Lus10021926 [exp] 692 / 0 AT5G26250 656 / 0.0 Major facilitator superfamily protein (.1) Lus10005870 [exp] 508 / 3e-177 AT5G26250 601 / 0.0 Major facilitator superfamily protein (.1) Lus10010534 [exp] 481 / 9e-167 AT5G26340 902 / 0.0 SUGAR TRANSPORT PROTEIN 13, Major facilitator superfamily protein (.1) Lus10002450 [exp] 481 / 2e-166 AT5G26340 905 / 0.0 SUGAR TRANSPORT PROTEIN 13, Major facilitator superfamily protein (.1) Lus10021924 [exp] 471 / 2e-162 AT5G26340 832 / 0.0 SUGAR TRANSPORT PROTEIN 13, Major facilitator superfamily protein (.1) Lus10013441 [exp] 434 / 2e-148 AT1G50310 731 / 0.0 sugar transporter 9 (.1) Lus10036325 [exp] 422 / 1e-143 AT4G02050 801 / 0.0 sugar transporter protein 7 (.1) Lus10018422 [exp] 415 / 7e-141 AT1G11260 835 / 0.0 sugar transporter 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G090000 [exp] 659 / 0 AT5G26250 664 / 0.0 Major facilitator superfamily protein (.1) Potri.008G150800 [exp] 576 / 0 AT5G26250 725 / 0.0 Major facilitator superfamily protein (.1) Potri.008G150700 [exp] 576 / 0 AT5G26250 725 / 0.0 Major facilitator superfamily protein (.1) Potri.001G248900 [exp] 558 / 0 AT5G26250 652 / 0.0 Major facilitator superfamily protein (.1) Potri.009G042900 [exp] 506 / 3e-176 AT5G26250 577 / 0.0 Major facilitator superfamily protein (.1) Potri.008G151100 [exp] 475 / 2e-164 AT5G26340 832 / 0.0 SUGAR TRANSPORT PROTEIN 13, Major facilitator superfamily protein (.1) Potri.010G089800 [exp] 472 / 5e-163 AT5G26340 836 / 0.0 SUGAR TRANSPORT PROTEIN 13, Major facilitator superfamily protein (.1) Potri.018G113300 [exp] 448 / 9e-154 AT4G02050 821 / 0.0 sugar transporter protein 7 (.1) Potri.006G189100 [exp] 437 / 2e-149 AT4G02050 821 / 0.0 sugar transporter protein 7 (.1) Potri.005G090700 [exp] 420 / 4e-143 AT3G19940 710 / 0.0 Major facilitator superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF00083 [flax] [poplar] Sugar_tr Sugar (and other) transporter
Representative CDS sequence Show only first row Show all	>Lus10010532 pacid=23156639 polypeptide=Lus10010532 locus=Lus10010532.g ID=Lus10010532.BGIv1.0 annot-version=v1.0 ATGGACATGGAGAAACCTAGACCCGACCATTTCCCGTCCAAGATCACAATCTACGTCGTACTATGCTGGTTCCTGGCCGCCTTCGGTGGGCTCATGTTCG GCTACGACATTGGCATCTCCGGGGGAGTTTCGGCCATGGACGACTTCCTTATAAAGTTCTTCCCCAAAGTATACCAAAAGAAGCTCCACGCCAAGGAAGA CAACTACTGTAAATACGACGATCAGAACCTTCAGCTCTTCACTTCGTCTCTCTACCTCGCTGCTCTGGTTTCCAGCTTTGTGGCGTCCAGAATCTGCGAG AAATTCGGAAGGAAGCCCACCATTCTCGTTGCCTCTGTGTTTTCCTCGCCGGTGCAGCCCTTAGTGCCCTTGCTGTCAATATCGAAATGCTCATCATCGG CAGAGTCCTCCTCGGTGTCGGCGTTGGCTTCGGGAGTTCCCCTGTTTTTGTCAGAGATCGCGCCGGTGAAATACAGAGGAGCTGTGAACATCCTGTTCCA GCTGTTCGTCACGATCGGAATCCTCTTCGCAAACATCGTCAACTACCTCACTTCCACTCACCATCCGTACGGATGGAGGATCTCCCTGGCAATCGCCGGA GTACCCGCGCTGGGCCTGTTTATCGGCTCGATCGTGATCTCCGAGACGCCGACCAGCCTGGTGGAGCGTAAGAAGCTGGAAGAGGGCCACAAGACGCTGA AAGTGATAAGAGGAGTCGACAACGTGGACGCCGAGTTCAACCAAATCAAGATCGCATGCGAGGAGGCCCAGCGCTGCACGAGTCCCTACAAGGAGCTCCT CACCAACAAGGCCAGCTTCCCTCCTTTGATCATCGGAATCTTGCTCCAGGTTTTCCAGCAATTCACTGGAATCAACGCCATCATGTTCTACGCCCCTGTT CTTTTCCAGACCGTTGGCTTCAAGAACGACGCCTCTCTGTTGTCCTCCGTCATCACCGGAGTCGTCAACGTCCTCAGCACGGTGGTCTCTGTCGTTGCTG TCGACAAGGTCGGTCGTAGGGCCCTCCTCCTTGAGGCCTGCGTTCAGATGTTCATCGCCCAGGTGGTTATAGGGATAATACTGCACTTAAACCTGTCGGC GACGGGGACGCTGACGAAGTTGGAAGCAGGGGTAGTGGTGGGGCTGGTGTGTTTCTTCGTGATGGGATTCGCATGGTCATGGGGTCCACTAGGTTGGCTT ATTCCCAGCGAGACATTCCCAGTGGAGATCAGAGCTGCTGGTTTCGCCTTCGCCGTCAGCTCAAACATGCTCTTCACCTTCATCATAGCTCAAGCTTTCC TCTCCATGATGTGCCATATGCAAGCCTACATCTTCTTCTTCTTTGCCGCGTGGATCCTCCTCATGGGTCTCTTCGTCATATTCTTCTTGCCCGAGACCAA GGGCGTCCCCATCGATGCCATGGTCGAACGCGTCTGGAAGAAACACCATTTCTGGAAGAAGTTCATGGACTGA
AA sequence Show only first row Show all	>Lus10010532 pacid=23156639 polypeptide=Lus10010532 locus=Lus10010532.g ID=Lus10010532.BGIv1.0 annot-version=v1.0 MDMEKPRPDHFPSKITIYVVLCWFLAAFGGLMFGYDIGISGGVSAMDDFLIKFFPKVYQKKLHAKEDNYCKYDDQNLQLFTSSLYLAALVSSFVASRICE KFGRKPTILVASVFSSPVQPLVPLLSISKCSSSAESSSVSALASGVPLFLSEIAPVKYRGAVNILFQLFVTIGILFANIVNYLTSTHHPYGWRISLAIAG VPALGLFIGSIVISETPTSLVERKKLEEGHKTLKVIRGVDNVDAEFNQIKIACEEAQRCTSPYKELLTNKASFPPLIIGILLQVFQQFTGINAIMFYAPV LFQTVGFKNDASLLSSVITGVVNVLSTVVSVVAVDKVGRRALLLEACVQMFIAQVVIGIILHLNLSATGTLTKLEAGVVVGLVCFFVMGFAWSWGPLGWL IPSETFPVEIRAAGFAFAVSSNMLFTFIIAQAFLSMMCHMQAYIFFFFAAWILLMGLFVIFFLPETKGVPIDAMVERVWKKHHFWKKFMD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G26250			Major facilitator superfamily ...		Lus10010532 [exp]	0	1
AT3G11320			Nucleotide-sugar transporter f...		Lus10040710 [exp]	2.4	0.7239
AT1G69310	WRKY	ATWRKY57, WRKY5...	WRKY DNA-binding protein 57 (....		Lus10036891 [exp]	35.0	0.6978
AT4G32680			unknown protein		Lus10035889 [exp]	57.8	0.6921
AT2G47600		ATMHX1, ATMHX	MAGNESIUM/PROTON EXCHANGER 1, ...		Lus10030365 [exp]	113.8	0.6499
AT5G59530			2-oxoglutarate (2OG) and Fe(II...		Lus10041230 [exp]	189.4	0.6457

Compare expression of checked genes

Lus10010532 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.