Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G32090 197 / 3e-66 Lactoylglutathione lyase / glyoxalase I family protein (.1.2) AT2G28420 64 / 4e-13 GLYI8 glyoxylase I 8, Lactoylglutathione lyase / glyoxalase I family protein (.1) AT1G80160 48 / 1e-07 GLYI7 glyoxylase I 7, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) AT1G15380 47 / 3e-07 GLYI4 glyoxylase I 4, Lactoylglutathione lyase / glyoxalase I family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006122 [exp] 282 / 9e-100 AT2G32090 199 / 3e-67 Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Lus10039579 [exp] 57 / 9e-11 AT2G28420 248 / 2e-84 glyoxylase I 8, Lactoylglutathione lyase / glyoxalase I family protein (.1) Lus10005324 [exp] 54 / 2e-09 AT2G28420 245 / 2e-83 glyoxylase I 8, Lactoylglutathione lyase / glyoxalase I family protein (.1) Lus10030070 [exp] 45 / 4e-06 AT1G80160 247 / 7e-85 glyoxylase I 7, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Lus10014480 [exp] 45 / 4e-06 AT1G80160 244 / 1e-83 glyoxylase I 7, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Lus10025971 [exp] 42 / 5e-05 AT1G15380 165 / 3e-52 glyoxylase I 4, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Lus10014269 [exp] 42 / 5e-05 AT1G15380 166 / 2e-52 glyoxylase I 4, Lactoylglutathione lyase / glyoxalase I family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G087000 [exp] 213 / 3e-72 AT2G32090 189 / 3e-63 Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Potri.008G153602 [exp] 152 / 9e-48 AT2G32090 139 / 8e-43 Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Potri.009G055500 [exp] 56 / 2e-10 AT2G28420 229 / 1e-77 glyoxylase I 8, Lactoylglutathione lyase / glyoxalase I family protein (.1) Potri.001G171600 [exp] 50 / 3e-08 AT1G80160 270 / 6e-94 glyoxylase I 7, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Potri.003G062400 [exp] 49 / 7e-08 AT1G80160 261 / 2e-90 glyoxylase I 7, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Potri.003G009000 [exp] 49 / 1e-07 AT1G80160 190 / 8e-62 glyoxylase I 7, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Potri.004G223300 [exp] 48 / 3e-07 AT1G80160 187 / 1e-60 glyoxylase I 7, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Potri.007G015100 [exp] 44 / 6e-06 AT1G15380 167 / 7e-53 glyoxylase I 4, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Potri.005G117000 [exp] 42 / 3e-05 AT1G80160 166 / 2e-52 glyoxylase I 7, Lactoylglutathione lyase / glyoxalase I family protein (.1.2) Potri.007G129200 [exp] 39 / 0.0002 AT1G80160 225 / 1e-76 glyoxylase I 7, Lactoylglutathione lyase / glyoxalase I family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0104 [flax] [poplar] Glyoxalase PF00903 [flax] [poplar] Glyoxalase Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Representative CDS sequence Show only first row Show all	>Lus10010552 pacid=23156641 polypeptide=Lus10010552 locus=Lus10010552.g ID=Lus10010552.BGIv1.0 annot-version=v1.0 ATGGCGGCAGCCTCGGCACCTATTCTTAGCCACATCGCCAGGGAATCCACAGACATTAGACGCCTGGCGAATTTCTACAAGGAGATCTTTGGGTTTGAGG AGATAGAGACGCCGGATTTTGGATTCAACGTTATATGGCTGAATCTGGCTAATGCTTTCTCTTTCCACCTTATTGAGAGGAGCCCCGAGACCAAGCTTCC AGAAGGACCTTACAGTGCTTCAGAGCCAATTCGCGATGTCACCCATCTCGCCGGAGGCCATCATATCTGTATCTCCGTCGCCAACTTCGACGCTTTTGTT CAATCTCTTAAGGAGAAAGGGATAGAGACATTCCAGAGGGCAGTTCCTGGTCGGTCAATTAGGCAAGCTTTCTTCTTTGATCCAGATGGCAATGGACTGG AGGTGGCAAGTCGGGATGAGTAG
AA sequence Show only first row Show all	>Lus10010552 pacid=23156641 polypeptide=Lus10010552 locus=Lus10010552.g ID=Lus10010552.BGIv1.0 annot-version=v1.0 MAAASAPILSHIARESTDIRRLANFYKEIFGFEEIETPDFGFNVIWLNLANAFSFHLIERSPETKLPEGPYSASEPIRDVTHLAGGHHICISVANFDAFV QSLKEKGIETFQRAVPGRSIRQAFFFDPDGNGLEVASRDE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G32090			Lactoylglutathione lyase / gly...		Lus10010552 [exp]	0	1
AT1G17130			Family of unknown function (DU...		Lus10005575 [exp]	1.0	0.9399
AT2G39840		TOPP4	type one serine/threonine prot...		Lus10040259 [exp]	4.9	0.9201
AT4G39870			TLD-domain containing nucleola...		Lus10041697 [exp]	6.9	0.9303
AT1G08110			lactoylglutathione lyase famil...		Lus10016138 [exp]	7.3	0.9307
AT1G74100		SOT16, ATSOT16,...	CORONATINE INDUCED-7, ARABIDOP...		Lus10022904 [exp]	9.8	0.9029
AT4G27130			Translation initiation factor ...		Lus10039660 [exp]	10.4	0.9185
					Lus10021689 [exp]	11.4	0.9193
AT5G03560			Tetratricopeptide repeat (TPR)...		Lus10027932 [exp]	14.1	0.9150
AT5G23590			DNAJ heat shock N-terminal dom...		Lus10027828 [exp]	15.2	0.9077
AT5G26610			D111/G-patch domain-containing...		Lus10001513 [exp]	16.7	0.9050

Compare expression of checked genes

Lus10010552 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.