Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G32030 198 / 3e-65 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT2G32020 190 / 6e-62 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT3G22560 131 / 4e-39 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039344 [exp] 235 / 8e-80 AT2G32030 236 / 4e-80 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10021914 [exp] 155 / 3e-48 AT3G22560 216 / 2e-72 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10039346 [exp] 116 / 1e-33 AT2G32030 116 / 6e-34 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10039343 [exp] 114 / 8e-32 AT3G22560 151 / 1e-46 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10006668 [exp] 112 / 3e-31 AT2G32030 122 / 2e-35 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10010569 [exp] 107 / 2e-29 AT3G22560 144 / 7e-44 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10032323 [exp] 84 / 5e-20 AT2G32030 107 / 6e-29 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10041199 [exp] 79 / 4e-19 AT3G22560 128 / 7e-39 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10007013 [exp] 74 / 2e-15 AT5G64300 506 / 4e-174 RED FLUORESCENT IN DARKNESS 1, Arabidopsis thaliana riboflavin A1, ARABIDOPSIS THALIANA GTP CYCLOHYDROLASE II, GTP cyclohydrolase II (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G085600 [exp] 235 / 1e-79 AT2G32030 223 / 6e-75 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.008G154800 [exp] 162 / 3e-51 AT3G22560 225 / 3e-76 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.008G154700 [exp] 158 / 1e-49 AT3G22560 177 / 3e-57 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.007G102900 [exp] 56 / 4e-10 AT3G22560 96 / 9e-26 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0257 [flax] [poplar] Acetyltrans PF00583 [flax] [poplar] Acetyltransf_1 Acetyltransferase (GNAT) family
Representative CDS sequence Show only first row Show all	>Lus10010570 pacid=23156682 polypeptide=Lus10010570 locus=Lus10010570.g ID=Lus10010570.BGIv1.0 annot-version=v1.0 ATGGACCCAGAGACTAAAATCTCACTCAGGCCACTAGAGCTCTCAGACATCGATGATTTCATGGTGTGGGCGTCGGACGAGAAAGTAGCTCAGTTCTGCT CGTGGGAGCCTTACACCAGTAAGCAAGACGCCCTCAACTTCATACAGAATTGGGTTCTACCTCACCCTTGGTACAGGGCAATCTGCCAAAACGGCAGGCC GATTGGTGTAGTTTTCGTCACCAAGAATTCAGGGGGTGACGCCTGCCGAGGAGAGCTCGGCTACGTGCTGGCTTCAGGACATTGGGGTAAAGGGATTGCG ACGAAGGCGGTGAAGATGGTGACGGAGGTGGTATTCAAGGAGCGGCCGGAGTTGGTTCGGGTGGAGGCCGTGGTTGATGTGGACAATGTTAGGTCCCAGA AGGTTTTGGAGAAGGTTGGGTTTGCGAGGGAAGGTGTGATGAGGAGTTTCTACGTTATGAAAGGGAGGTGTCGTGATTTTGTCATGTTTAGCTTTTTGTC TACTGATGCTGCTCCTGCTGCTGCTGCTGTTACTTCTGTTGATTGTTGA
AA sequence Show only first row Show all	>Lus10010570 pacid=23156682 polypeptide=Lus10010570 locus=Lus10010570.g ID=Lus10010570.BGIv1.0 annot-version=v1.0 MDPETKISLRPLELSDIDDFMVWASDEKVAQFCSWEPYTSKQDALNFIQNWVLPHPWYRAICQNGRPIGVVFVTKNSGGDACRGELGYVLASGHWGKGIA TKAVKMVTEVVFKERPELVRVEAVVDVDNVRSQKVLEKVGFAREGVMRSFYVMKGRCRDFVMFSFLSTDAAPAAAAVTSVDC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G32030			Acyl-CoA N-acyltransferases (N...		Lus10010570 [exp]	0	1
AT4G38540			FAD/NAD(P)-binding oxidoreduct...		Lus10033366 [exp]	1.4	0.9746
AT5G57010			calmodulin-binding family prot...		Lus10013526 [exp]	5.7	0.9652
AT1G49860		ATGSTF14	glutathione S-transferase (cla...		Lus10036808 [exp]	6.3	0.9691
AT2G01340		At17.1	unknown protein		Lus10036005 [exp]	7.3	0.9771
AT5G10530			Concanavalin A-like lectin pro...		Lus10007079 [exp]	9.4	0.9597
AT2G43840		UGT74F1	UDP-glycosyltransferase 74 F1 ...		Lus10014148 [exp]	10.5	0.9741
AT4G33050		EDA39	embryo sac development arrest ...		Lus10014872 [exp]	11.5	0.9644
AT1G63970		MECPS, ISPF	2C-METHYL-D-ERYTHRITOL 2,4-CYC...		Lus10017522 [exp]	18.3	0.9679
AT2G26530		AR781	Protein of unknown function (D...		Lus10021757 [exp]	18.5	0.9648
AT4G38540			FAD/NAD(P)-binding oxidoreduct...		Lus10034817 [exp]	19.4	0.9687

Compare expression of checked genes

Lus10010570 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.