Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10005336 [exp] 73 / 9e-17 AT2G13450 43 / 7e-05 unknown protein Lus10038707 [exp] 54 / 4e-09 ND 42 / 4e-04
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10010661 pacid=23141668 polypeptide=Lus10010661 locus=Lus10010661.g ID=Lus10010661.BGIv1.0 annot-version=v1.0 ATGGAAGGTTTTCTTCTGTCAGTTTGGCAGGTGTACTCGACGGTTACCGTTGGCAGTTTGGATGTCCCTTGGTCGGTTTTTCCTCTCGAAATTTCAGTTT CCGGCTGTTTCTTTCAGGTCTATCCCCTTGACAGGTTTCCGGTTCCTTCCAAGTGGGTTGTTGTGGCCTTCACGGAGGATGAAGTTCAAGGAGGTTGTGA TCGCTGCCGCCTCAGTGTGATTGGGCGCATCTTTTGGCCCTTACCAAAGCCAATTCATGGAGTTCTCCAGGATATGACATGCCAGTGTAAATTGAATCCT ATAGTGCTTTTTGTCTTTAAGATTGGGCATGGCTTGATTCAATTCACTTTCCCTTCAGAAGCCTCTATGAACACAGTTCTCATGACCAACCCTAGAGTTA TCGTGCGCATATTATAA
AA sequence Show only first row Show all	>Lus10010661 pacid=23141668 polypeptide=Lus10010661 locus=Lus10010661.g ID=Lus10010661.BGIv1.0 annot-version=v1.0 MEGFLLSVWQVYSTVTVGSLDVPWSVFPLEISVSGCFFQVYPLDRFPVPSKWVVVAFTEDEVQGGCDRCRLSVIGRIFWPLPKPIHGVLQDMTCQCKLNP IVLFVFKIGHGLIQFTFPSEASMNTVLMTNPRVIVRIL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10010661 [exp]	0	1
AT2G17480		ATMLO8, MLO8	MILDEW RESISTANCE LOCUS O 8, S...		Lus10019630 [exp]	2.4	0.7295
AT3G13810	C2H2ZnF	ATIDD11	indeterminate(ID)-domain 11 (....		Lus10004840 [exp]	6.6	0.7022
AT5G53590			SAUR-like auxin-responsive pro...		Lus10006820 [exp]	12.5	0.6251
AT5G43820			Pentatricopeptide repeat (PPR)...		Lus10010662 [exp]	19.5	0.6923
					Lus10029487 [exp]	21.9	0.6289
					Lus10038412 [exp]	22.1	0.6743
AT1G27170			transmembrane receptors;ATP bi...		Lus10002232 [exp]	26.5	0.6847
					Lus10000834 [exp]	30.9	0.6459
AT1G74670		GASA6	GA-stimulated Arabidopsis 6, G...		Lus10002059 [exp]	31.9	0.6590
AT1G61680		ATTPS14	terpene synthase 14 (.1.2)		Lus10035240 [exp]	33.3	0.6145

Compare expression of checked genes

Lus10010661 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.