Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24020 93 / 3e-22 MLP423 MLP-like protein 423 (.1.2) AT1G23120 42 / 0.0002 Polyketide cyclase/dehydrase and lipid transport superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10029184 [exp] 390 / 1e-130 AT1G24020 84 / 1e-18 MLP-like protein 423 (.1.2) Lus10029182 [exp] 293 / 5e-95 AT1G24020 88 / 1e-20 MLP-like protein 423 (.1.2) Lus10029186 [exp] 223 / 5e-64 AT1G24020 78 / 2e-16 MLP-like protein 423 (.1.2) Lus10010702 [exp] 219 / 1e-63 AT1G24020 79 / 4e-17 MLP-like protein 423 (.1.2) Lus10010699 [exp] 129 / 3e-36 AT1G24020 56 / 7e-11 MLP-like protein 423 (.1.2) Lus10010701 [exp] 105 / 2e-26 AT1G24020 80 / 3e-19 MLP-like protein 423 (.1.2) Lus10029185 [exp] 103 / 1e-25 AT1G24020 80 / 2e-19 MLP-like protein 423 (.1.2) Lus10029183 [exp] 98 / 3e-23 AT1G24020 73 / 6e-16 MLP-like protein 423 (.1.2) Lus10030840 [exp] 92 / 1e-21 AT1G24020 189 / 2e-62 MLP-like protein 423 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G096000 [exp] 84 / 6e-19 AT1G24020 188 / 3e-62 MLP-like protein 423 (.1.2) Potri.008G213223 [exp] 51 / 1e-07 AT1G24020 64 / 6e-14 MLP-like protein 423 (.1.2) Potri.008G213669 [exp] 51 / 2e-07 AT1G24020 68 / 8e-15 MLP-like protein 423 (.1.2) Potri.008G213446 [exp] 51 / 2e-07 AT1G24020 68 / 8e-15 MLP-like protein 423 (.1.2) Potri.008G212700 [exp] 51 / 2e-07 AT1G24020 68 / 8e-15 MLP-like protein 423 (.1.2) Potri.010G000400 [exp] 51 / 2e-07 AT1G24020 66 / 4e-14 MLP-like protein 423 (.1.2) Potri.010G000600 [exp] 50 / 3e-07 AT1G24020 67 / 1e-14 MLP-like protein 423 (.1.2) Potri.011G025966 [exp] 49 / 7e-07 AT1G24020 55 / 7e-10 MLP-like protein 423 (.1.2) Potri.011G025900 [exp] 49 / 7e-07 AT1G24020 55 / 7e-10 MLP-like protein 423 (.1.2) Potri.011G026100 [exp] 49 / 8e-07 AT1G24020 54 / 2e-09 MLP-like protein 423 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0209 [flax] [poplar] Bet_v_1_like PF00407 [flax] [poplar] Bet_v_1 Pathogenesis-related protein Bet v 1 family CL0066 [flax] [poplar] Trefoil PF07468 [flax] [poplar] Agglutinin Agglutinin domain
Representative CDS sequence Show only first row Show all	>Lus10010698 pacid=23148760 polypeptide=Lus10010698 locus=Lus10010698.g ID=Lus10010698.BGIv1.0 annot-version=v1.0 ATGTCCAGCTCAACCACTACGCCTGCTTGTTCAGGAGCGGCCCTCCTACAAAAGATTGCTTGTACGCAGAAACCGGTTACTTCTTCGAAACCAAATCCAG TTTCGGAGAAGAAACAAGATCCTCTGAAGCCAAAGCCGGTCCAGGAGAAGAAAACAAGCTCCTCCGAAGTCAAAGCCGGTGGTGGACAAGAAACAAGATC CTCAGAAACCGAAGCCAATACCGGAGAATACACAAGATACTCTGAAACCAAAGCCGGTGGTGCCCGAGAAGAAACAAGATCCTCCGAAACCGAAGCCGGT CCCAGAAAACACAAAAGATCCTACAAAACCAAAGCCGGTGGTGCCGGAGAAGAAACAAGGTCCTCTGAAACCAAAGCCTTCATCGGGAAAGGAAACAGTG GAAAGTCCATGTACAACGACAAGTACCTTAGCTACAGAGAAGATCCAGGGAAGGAACAGGACGGGTTCCTCCAGTTCTCCGGAAATGATCCCATGAGCCC TTACTCGAAATTTGAGGTCAAGATGTCGGCCACTGAGACGGGATCCTTCCACCTAATGTGCAGCCTTAACAACAAGTACTTAGTAAGGACGTCTCCGAGT CAACACTGGATCCGCGGGTCGAATACTCGACCCGAGGAGGACAAATCGAAATGGTCGTGCACTCTGTTCAAACCGATCCCCGTTGACGATCATAATGGAG ACGGGAATTTAATAGTAGTTCGGTTCCTCCACGTCCAGCTCAACCACTACGCTTGCCTGTTCAGGAGCGGCCCTCCCTTTGGAGATTGCCTGTTCGCAGG TTGGAAATCTCCCAATCAGGACTTGTGCGATGCTTGCTCGGTCATCGATTGGGAGTCCCTTCACCAAATCAGGGTTGGTGATTCCAGTCAGCAAGTTACT CCGAAACCAGAGCCTTCACGGGGAAAGGAAATAGTGGATAGTAATCGGGTGAGTTTCAACATCATCTCATCTGCAGATAAGTTCTGGGGAGCCGTATTTG CGTCTACAAAAATACTGCCAAAAGCCTTGCCTCAAGCATACAAAGCTATAAAAGTAATGAAGGGCGACGGGTTCAGCCAGGGTTCAGTCCGCGAGATAAC CTTCGGTCAAGGTGATGTGGAGAAGTTAGAAGAGAAGATATCGTACGTTGATCACGAGACGAAGACGATGACATGGTCCCTCATACAAGGAGGAATGCTG AACCACTACGAGACTTTCAAGATCACCATAACCGTTGCTGAGAAGAAGCGTCACGACAGGGGATGCAGAGTCAATTGGAGCTATGTTGGTACCAACCCAA AGCCCGGTTTCGATAAGGATGCCTTAATGGAGTTGTTTCAGGATACCTTCGAAACCGTAGATGATTATCTGGAGGCCAATGAAGCTAGGGATTAG
AA sequence Show only first row Show all	>Lus10010698 pacid=23148760 polypeptide=Lus10010698 locus=Lus10010698.g ID=Lus10010698.BGIv1.0 annot-version=v1.0 MSSSTTTPACSGAALLQKIACTQKPVTSSKPNPVSEKKQDPLKPKPVQEKKTSSSEVKAGGGQETRSSETEANTGEYTRYSETKAGGAREETRSSETEAG PRKHKRSYKTKAGGAGEETRSSETKAFIGKGNSGKSMYNDKYLSYREDPGKEQDGFLQFSGNDPMSPYSKFEVKMSATETGSFHLMCSLNNKYLVRTSPS QHWIRGSNTRPEEDKSKWSCTLFKPIPVDDHNGDGNLIVVRFLHVQLNHYACLFRSGPPFGDCLFAGWKSPNQDLCDACSVIDWESLHQIRVGDSSQQVT PKPEPSRGKEIVDSNRVSFNIISSADKFWGAVFASTKILPKALPQAYKAIKVMKGDGFSQGSVREITFGQGDVEKLEEKISYVDHETKTMTWSLIQGGML NHYETFKITITVAEKKRHDRGCRVNWSYVGTNPKPGFDKDALMELFQDTFETVDDYLEANEARD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10010698 [exp]	0	1
					Lus10029181 [exp]	3.0	0.8421
AT4G04450	WRKY	ATWRKY42, WRKY4...	WRKY family transcription fact...		Lus10009969 [exp]	7.3	0.8703
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10010700 [exp]	11.2	0.8457
AT5G55980			serine-rich protein-related (....		Lus10023227 [exp]	19.4	0.7897
AT1G61260			Protein of unknown function (D...		Lus10020090 [exp]	26.0	0.8075
					Lus10033372 [exp]	26.2	0.8284
AT3G11810			unknown protein		Lus10030427 [exp]	31.4	0.7901
AT1G66540			Cytochrome P450 superfamily pr...		Lus10032856 [exp]	32.4	0.8308
					Lus10020249 [exp]	41.0	0.8021
AT1G06620			2-oxoglutarate (2OG) and Fe(II...		Lus10002888 [exp]	50.4	0.7913

Compare expression of checked genes

Lus10010698 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.