Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G24020 74 / 4e-17 MLP423 MLP-like protein 423 (.1.2) AT1G70880 38 / 0.001 Polyketide cyclase/dehydrase and lipid transport superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10029183 [exp] 317 / 2e-111 AT1G24020 73 / 6e-16 MLP-like protein 423 (.1.2) Lus10010701 [exp] 221 / 1e-74 AT1G24020 80 / 3e-19 MLP-like protein 423 (.1.2) Lus10029185 [exp] 214 / 6e-72 AT1G24020 80 / 2e-19 MLP-like protein 423 (.1.2) Lus10003451 [exp] 96 / 2e-25 AT1G24020 73 / 7e-17 MLP-like protein 423 (.1.2) Lus10001042 [exp] 94 / 1e-24 AT1G24020 69 / 5e-15 MLP-like protein 423 (.1.2) Lus10001041 [exp] 90 / 4e-23 AT1G24020 64 / 2e-13 MLP-like protein 423 (.1.2) Lus10010698 [exp] 93 / 3e-22 AT1G24020 94 / 2e-22 MLP-like protein 423 (.1.2) Lus10000474 [exp] 87 / 8e-22 AT1G24020 64 / 2e-13 MLP-like protein 423 (.1.2) Lus10029182 [exp] 91 / 1e-21 AT1G24020 88 / 1e-20 MLP-like protein 423 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G096000 [exp] 76 / 8e-18 AT1G24020 188 / 3e-62 MLP-like protein 423 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0209 [flax] [poplar] Bet_v_1_like PF00407 [flax] [poplar] Bet_v_1 Pathogenesis-related protein Bet v 1 family
Representative CDS sequence Show only first row Show all	>Lus10010700 pacid=23148731 polypeptide=Lus10010700 locus=Lus10010700.g ID=Lus10010700.BGIv1.0 annot-version=v1.0 ATGTCGCCACCGTCGTCGTCGTCAGGATCGTCAGCGGGTCGCATTACGCTGGCCGACCACAAAATGACATCATCGGCCAACGATGTCTGGGGGGTCATCT TTGCGTCCACCTCTGTCTTCCCGCAGGTTCTCCCAAACCTCTACAAAGAGATCAAAACCACCAAGCCCGACGGCTACTCTCCAAATTCCATGCGCGAGAT CAATTATGGCTATGCCGCAGGGTTTGGAGATACAGTGAAGTCGTCGATCGAGGAGATAAAAAGGGTGGAGCACACGACTAGGACCGTGATTTATGAGGTT ACGAGTGGGGATATCCTGGAGCATCATGACACTTTTGACACCACTATAATGGTGACTCCGATGGATGGTGTTAGCCCGAGGAAGCCTGGGTGCAAGGTTT CGTGGACCTGTGACTATACCGGTGCAACGGGTGCTTTTAGCGCGGCCATAGTCAAGGCGTTTTGGATCAACACCTTGGATGGCTTGGACAGCTATCTCCA GAAGCTAGCTAAAAATAGTCAATAA
AA sequence Show only first row Show all	>Lus10010700 pacid=23148731 polypeptide=Lus10010700 locus=Lus10010700.g ID=Lus10010700.BGIv1.0 annot-version=v1.0 MSPPSSSSGSSAGRITLADHKMTSSANDVWGVIFASTSVFPQVLPNLYKEIKTTKPDGYSPNSMREINYGYAAGFGDTVKSSIEEIKRVEHTTRTVIYEV TSGDILEHHDTFDTTIMVTPMDGVSPRKPGCKVSWTCDYTGATGAFSAAIVKAFWINTLDGLDSYLQKLAKNSQ

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10010700 [exp]	0	1
AT4G04450	WRKY	ATWRKY42, WRKY4...	WRKY family transcription fact...		Lus10009969 [exp]	2.2	0.9042
AT1G61260			Protein of unknown function (D...		Lus10020090 [exp]	7.3	0.8832
AT1G70570			anthranilate phosphoribosyltra...		Lus10006201 [exp]	9.3	0.8944
AT1G52340		SIS4, SDR1, ISI...	SHORT-CHAIN DEHYDROGENASE REDU...		Lus10016997 [exp]	9.3	0.8973
AT5G44440			FAD-binding Berberine family p...		Lus10039682 [exp]	9.9	0.8777
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10010698 [exp]	11.2	0.8457
AT1G06620			2-oxoglutarate (2OG) and Fe(II...		Lus10002888 [exp]	14.1	0.8725
AT1G05560		UGT75B1, UGT1	UDP-GLUCOSE TRANSFERASE 1, UDP...		Lus10021610 [exp]	21.1	0.8888
AT4G31180			Class II aminoacyl-tRNA and bi...		Lus10028555 [exp]	21.3	0.8896
AT2G01170		BAT1	bidirectional amino acid trans...		Lus10039616 [exp]	22.8	0.8892

Compare expression of checked genes

Lus10010700 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.