Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G18265 64 / 6e-12 Protein of unknown function, DUF593 (.1) AT5G16720 49 / 1e-06 Protein of unknown function, DUF593 (.1) AT1G18990 45 / 2e-05 Protein of unknown function, DUF593 (.1) AT1G74830 42 / 0.0003 Protein of unknown function, DUF593 (.1) AT4G13630 41 / 0.0004 Protein of unknown function, DUF593 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035638 [exp] 328 / 4e-115 AT1G18265 72 / 6e-15 Protein of unknown function, DUF593 (.1) Lus10020457 [exp] 109 / 2e-28 AT1G18265 77 / 7e-16 Protein of unknown function, DUF593 (.1) Lus10007082 [exp] 105 / 7e-27 AT1G18265 78 / 2e-16 Protein of unknown function, DUF593 (.1) Lus10004050 [exp] 42 / 0.0002 AT5G16720 290 / 7e-87 Protein of unknown function, DUF593 (.1) Lus10016203 [exp] 42 / 0.0002 AT5G06560 475 / 2e-164 Protein of unknown function, DUF593 (.1) Lus10007129 [exp] 42 / 0.0004 AT4G13630 160 / 7e-42 Protein of unknown function, DUF593 (.1.2) Lus10036599 [exp] 41 / 0.0005 AT4G30830 179 / 2e-52 Protein of unknown function, DUF593 (.1) Lus10011854 [exp] 41 / 0.0005 AT4G13630 199 / 1e-56 Protein of unknown function, DUF593 (.1.2) Lus10012288 [exp] 40 / 0.0009 AT5G06560 464 / 2e-160 Protein of unknown function, DUF593 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G078800 [exp] 105 / 3e-27 AT1G18265 71 / 3e-14 Protein of unknown function, DUF593 (.1) Potri.010G109900 [exp] 46 / 2e-05 AT1G70750 277 / 2e-80 Protein of unknown function, DUF593 (.1) Potri.016G065200 [exp] 45 / 2e-05 AT5G06560 517 / 4e-180 Protein of unknown function, DUF593 (.1) Potri.008G132200 [exp] 45 / 2e-05 AT1G70750 288 / 1e-84 Protein of unknown function, DUF593 (.1) Potri.012G073400 [exp] 45 / 3e-05 AT1G74830 390 / 2e-129 Protein of unknown function, DUF593 (.1) Potri.006G199000 [exp] 43 / 0.0001 AT5G06560 523 / 0.0 Protein of unknown function, DUF593 (.1) Potri.017G129200 [exp] 42 / 0.0002 AT5G16720 286 / 2e-84 Protein of unknown function, DUF593 (.1) Potri.004G087600 [exp] 42 / 0.0003 AT5G16720 281 / 2e-82 Protein of unknown function, DUF593 (.1) Potri.018G103500 [exp] 40 / 0.0006 AT5G57830 169 / 5e-48 Protein of unknown function, DUF593 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04576 [flax] [poplar] Zein-binding Zein-binding
Representative CDS sequence Show only first row Show all	>Lus10010755 pacid=23148765 polypeptide=Lus10010755 locus=Lus10010755.g ID=Lus10010755.BGIv1.0 annot-version=v1.0 ATGGGGTGTGAAGCCTGCATCAAGTTCTTAGCTCAAATCAGCGACTTTGATGGTGGGTTTTCGGTGTTGGGTAGTTTCTCTCATGCTTTCGATTTTCTAT GGCTTGTTTTTCTTTTGGCGTTTGGGCTGAAGCTGGTTCAGTCAATTGATCCCAGAAATGGGGTTTCTTGCCGAAAGGGTTCTGATTTACTATTCAACTC CAACAAGATTGTGTCTTTCAAGGATAAGAATGATGATGACGATGATGATGGTGCTGGTGATGAGAACGAATTATATGGCGAAGATGAAGAATTTGACGTT GTGGCGCTGAGGAGATTGGTTAGGACTGAGAGGCAGAGGAAACGAGCAGCAGAATTGGAAGTGGAGAAGGAAAGAACGGCGGCTTCATCCGCCGCTAATG AAGCGATGGCAATGATTCTGAGGCTTCAGAATGAGAAAAGCTCTCTGGAGATTGAAGTCAATCAGTACAGGAGAACGGCGGAACAGAACAAGGAGTATGT CCGACAGGTTATCCAATCGCTTCAGTCGATGATCGTGAAACATGAAAGTGAGAGGAGGTTGCTGGAAGAGAAGCTCAGGATTTGCAGGCAGAAGTTGGAG AGACATGGAATAATTGGTGAAGTTAATTGTGATTTTGGTGATATGGAAGTTGAATCTTTAGCAGCAGTTGCTGTTATTGAGGCAAAAAGTTTTTGA
AA sequence Show only first row Show all	>Lus10010755 pacid=23148765 polypeptide=Lus10010755 locus=Lus10010755.g ID=Lus10010755.BGIv1.0 annot-version=v1.0 MGCEACIKFLAQISDFDGGFSVLGSFSHAFDFLWLVFLLAFGLKLVQSIDPRNGVSCRKGSDLLFNSNKIVSFKDKNDDDDDDGAGDENELYGEDEEFDV VALRRLVRTERQRKRAAELEVEKERTAASSAANEAMAMILRLQNEKSSLEIEVNQYRRTAEQNKEYVRQVIQSLQSMIVKHESERRLLEEKLRICRQKLE RHGIIGEVNCDFGDMEVESLAAVAVIEAKSF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G16720			Protein of unknown function, D...		Lus10010755 [exp]	0	1
AT5G46050		ATPTR3, PTR3	ARABIDOPSIS THALIANA PEPTIDE T...		Lus10024935 [exp]	2.8	0.9169
AT1G64770		PnsB2, NDH45, N...	Photosynthetic NDH subcomplex...		Lus10007429 [exp]	4.8	0.9204
AT4G38225			unknown protein		Lus10026560 [exp]	6.2	0.9034
AT5G20935			unknown protein		Lus10013382 [exp]	7.7	0.9030
AT2G36270	bZIP	EEL, GIA1, ABI5	GROWTH-INSENSITIVITY TO ABA 1,...		Lus10014194 [exp]	8.5	0.8878
AT1G18265			Protein of unknown function, D...		Lus10035638 [exp]	9.2	0.9009
AT5G51260			HAD superfamily, subfamily III...		Lus10038847 [exp]	11.6	0.9018
AT4G21960		PRXR1	Peroxidase superfamily protein...		Lus10006778 [exp]	12.0	0.8884
AT5G20700			Protein of unknown function (D...		Lus10027595 [exp]	14.7	0.8722
AT2G47400		CP12-1	CP12 domain-containing protein...		Lus10025025 [exp]	14.7	0.8986

Compare expression of checked genes

Lus10010755 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.