Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10010788 pacid=23170749 polypeptide=Lus10010788 locus=Lus10010788.g ID=Lus10010788.BGIv1.0 annot-version=v1.0 ATGCCGACTCACCGGCCTCCCTACTCGTTAACTGATCTTGAACTTGGACTTTGTCCTTCTCTACCACTGGCTTGGCCGATTAGTCTTGCCCTTGAGCGTA CTCCTGCAACACCATCTCCTGCAGTACATGGCCAGTTGTGCTACATCAAATACTGGGTTTGTCTGCTGGATTTGCCTAAGAGCGCTCGATCCCCGACGAT TGATCAGGGTGTGGCCTCTGTCATCGGGAAGGTGCTGGACGCAGGAATCTTTGATTGCGCAACTAAGCCGGACTATTTCATATGTTGCCAAGTCAGTGTT GATGTCCTTAAGCCTCTGTTCGGCCATAGGGAGATCCAATTCAGGCAATCGAGAAAGAAGTTCGTCTGGTTCCAGTACAAAGGACTAATGCAGGCTTTGG TCCTAGAGGCTGAGCTCCAGGGTGGCGGACCAGATCAGCAAGAAGCGACCTCCAGCCGAAGTTTGGGCCCCCTTCCAGTTCTAGGCCCAGCAGCTTCCAA AGAACCACTATCCTCTGAAGCTACGGTTTCAACACTTCTTTTGGCCCGTCTGTTGCGGCCACTATTCCACCGATAG
AA sequence Show only first row Show all	>Lus10010788 pacid=23170749 polypeptide=Lus10010788 locus=Lus10010788.g ID=Lus10010788.BGIv1.0 annot-version=v1.0 MPTHRPPYSLTDLELGLCPSLPLAWPISLALERTPATPSPAVHGQLCYIKYWVCLLDLPKSARSPTIDQGVASVIGKVLDAGIFDCATKPDYFICCQVSV DVLKPLFGHREIQFRQSRKKFVWFQYKGLMQALVLEAELQGGGPDQQEATSSRSLGPLPVLGPAASKEPLSSEATVSTLLLARLLRPLFHR

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G36228			nucleic acid binding;zinc ion ...		Lus10010788 [exp]	0	1
AT4G09760			Protein kinase superfamily pro...		Lus10028728 [exp]	7.8	0.7615
AT5G14180		MPL1	Myzus persicae-induced lipase ...		Lus10023171 [exp]	17.2	0.6999
AT5G41410	HD	BEL1	BELL 1, POX (plant homeobox) f...		Lus10032292 [exp]	24.5	0.6955
AT4G09760			Protein kinase superfamily pro...		Lus10028696 [exp]	26.6	0.6879
AT1G71140			MATE efflux family protein (.1...		Lus10028904 [exp]	26.7	0.6445
AT2G33530		SCPL46	serine carboxypeptidase-like 4...		Lus10040327 [exp]	29.8	0.6979
AT3G44900		ATCHX4	cation/H+ exchanger 4, cation/...		Lus10037374 [exp]	30.4	0.6739
					Lus10038131 [exp]	33.0	0.6773
AT1G53050			Protein kinase superfamily pro...		Lus10006800 [exp]	41.0	0.6867
AT2G36400	GRF	ATGRF3	growth-regulating factor 3 (.1...		Lus10028899 [exp]	45.7	0.6650

Compare expression of checked genes

Lus10010788 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.