Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G63770 893 / 0 ATDGK2 diacylglycerol kinase 2 (.1.2) AT5G07920 644 / 0 ATDGK1, DGK1 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) AT5G57690 135 / 2e-33 ATDGK4 diacylglycerol kinase 4 (.1) AT4G28130 133 / 5e-33 DGK6, ATDGK6 diacylglycerol kinase 6 (.1) AT4G30340 129 / 2e-31 ATDGK7 diacylglycerol kinase 7 (.1) AT2G18730 127 / 8e-31 ATDGK3 diacylglycerol kinase 3 (.1) AT2G20900 125 / 2e-30 DGK5, ATDGK5 diacylglycerol kinase 5 (.1.2.3.4)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012719 [exp] 1369 / 0 AT5G63770 957 / 0.0 diacylglycerol kinase 2 (.1.2) Lus10021625 [exp] 612 / 0 AT5G07920 1101 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Lus10003460 [exp] 573 / 0 AT5G07920 1050 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Lus10015742 [exp] 566 / 0 AT5G07920 1053 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Lus10034701 [exp] 368 / 2e-119 AT5G07920 746 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Lus10034702 [exp] 271 / 3e-86 AT5G07920 400 / 8e-137 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Lus10031612 [exp] 128 / 5e-31 AT2G20900 719 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10033732 [exp] 125 / 4e-30 AT2G20900 730 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10019987 [exp] 124 / 7e-30 AT4G30340 713 / 0.0 diacylglycerol kinase 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G097900 [exp] 951 / 0 AT5G63770 933 / 0.0 diacylglycerol kinase 2 (.1.2) Potri.005G070900 [exp] 935 / 0 AT5G63770 897 / 0.0 diacylglycerol kinase 2 (.1.2) Potri.012G066300 [exp] 652 / 0 AT5G07920 1154 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Potri.001G408500 [exp] 125 / 3e-30 AT2G20900 695 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Potri.018G096700 [exp] 122 / 3e-29 AT2G18730 702 / 0.0 diacylglycerol kinase 3 (.1) Potri.013G148500 [exp] 122 / 6e-29 AT2G20900 765 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Potri.006G174700 [exp] 121 / 7e-29 AT4G30340 670 / 0.0 diacylglycerol kinase 7 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00609 [flax] [poplar] DAGK_acc Diacylglycerol kinase accessory domain CL0240 [flax] [poplar] PFK PF00781 [flax] [poplar] DAGK_cat Diacylglycerol kinase catalytic domain CL0006 [flax] [poplar] C1 PF00130 [flax] [poplar] C1_1 Phorbol esters/diacylglycerol binding domain (C1 domain)
Representative CDS sequence Show only first row Show all	>Lus10010896 pacid=23172478 polypeptide=Lus10010896 locus=Lus10010896.g ID=Lus10010896.BGIv1.0 annot-version=v1.0 ATGATGTTTAAGGGAGGAATTTCGCTAGTTTGGAGGCTGACCAGCTCTGAATCCTATGGCCTATCACTTTTCCGGTGGTTCTTCAGTGGAGCATTGGGTC TTCTGGCGTTTGCATACGCGATTCTTATATGGCAGAGAAAGACATCACTTAATTGGGTTAAAGCAGCTGCTAGAGCGAAGAAAGAAGCTTGGAAGAAGCT TAATGTTCCTCAATCTTTTCATTCATGGATGGAGGATTTAGCTCAGATCCGGCTGCCTTCCACGTGCTGTGTTTGCCTCACTTCCCTGGTCTCTCCTACC GGTGCCTCGAAATCTGCTTCGAAAACTTCTGTCCACCGCTGCTCCGTTTGCGGAGTTGCAGCTCACTTCTACTGTTCGGAATTTGCTGCAAAGGATTGCA AGTGTGTTGCACAAGCTGGTTTCAGTCAAGTTCAACATCAGTGGTCGGAGAGGTGGTCTAAAATGGAGGAAATCTCAGAGATGTCTGCATTTTGCTGCTA CTGTGATGATCCATGTGGTGTACCTTTCGTTAGCGACTCGCCCACATGGCACTGCTTGTGGTGTCAGCGCCTTATACATGTTAAATGCCACGCTAGGATG TCAAAAGAATCCGGGGATGTTTGTGATTTGGGCCCTCTAAGTAGGATTATTCTTTCTCCACTCTGTGTAAAGGACTTTGAAGATCGAAGCTCTTCCTGTT CCACCCCAGAGGAAATTCCGGCTTCTTCATTTCGTGGACACATCAGAAGGAGACGCACTCGGGCTAAAAATGGGAATAGTTTCTCTGCAAATGGTAGGCT GCAAGACGCATCAGCTACAACCAAGGCCCTAGACTATTTACTCAGTGGGCTTGTTAATCTGAAGAAGTCAGGATACGACAAAACCATCAATTGTTCCAAG AGAGATGGCAGATCTAAAGGAGATGGTGATGGATTGACACACAAGAAAGATGGTACTACCTTCAACAGCCAACTAAAAAAATATGCTTTGGTCAATCTAG CTCAGGATGCTAGACCCCTTCTTGTTTTCATTAATTTCAAGAGCGGAGGTCAACTCGGTTCTTCTCTGCGAAGCAGGCTGAACTTGCTGTTAAATCCCGC CCAGGTATTCGAACTGAGTTCTTCTCAGGGGCCTGAAGCAGGTTTGCAATTGTTCAGCGATGTACAGTATTTCCGGATTCTAGTTTGTGGTGGAGATGGA ACAGTTGCATGGGTCCTTGATGCAATTGAGAGGCTTAATTTTGAATCCCCTCCACCTGTTGCTGTCCTACCTCTCGGTACTGGAAATGATCTGTCACGGG TATTGCAGTGGGGTAGAGGTTTCAAAATGGCTAAGCGACAAGGTGGCTTATGTGCAGTCTTGCATGAGGTTGACCATGCTGCTGTTACAATGCTAGATAG ATGGAAAGTAAATATCATAGAAGAGAACCTAGATGGACAGACGAAAAACGAGCAATCAAAGTTCATGATAAACTATTTAGGTATTGGATGCGATGCGAAA CTAGCGTACGAGTTTCATGTAACTCGCCAGGAAAAGCCTGAAAAATTTAGTAGTCAGTTTGTCAATAAATTACGGTACGCTAAAGAAGGAGCGAGGGACA TAATGGACAGAGCTTGTGCAGATTTACCATGGCAAGTGTGGCTTGAAGTTGATGGAAAGGACGTTCAGATTCCAAAGGATACTGAAGGTTTGATTGTCCT CAACATTGGCAGCTACATGGGCGGAGTTGATCTATGGCAAAATGATTATGAATATGACGACGAGTTCACCCTTCAATCCATGCAAGATAAAATGCTCGAG ATCGTTTGCGTTCGTGGAGCGTGGCACCTTGGCAAGATCCAGGTTGGACTCTCACAAGCAACGAGGCTAGCCCAAGGGAATGTTATAAGAATACATGCTT CTAGTTCTTTCCCAGTCCAGATAGATGGAGAGCCATTCATCCATCAACCAGGTTGCTTGGAAATCAAACACGACCAGCAGGTGTTCATGTTGAGGAGGAC GTTGGAGGAGCCAAGAGGGCACGCAGTCGCGATAATGACGGAAGTATTGGCAGACGCAGAGTGCAAAGGAATCATCAACACTTCCCAGAGGAAGATCTTG CTCCAGCAGTTGGCTTTAAACCTCTCCTGA
AA sequence Show only first row Show all	>Lus10010896 pacid=23172478 polypeptide=Lus10010896 locus=Lus10010896.g ID=Lus10010896.BGIv1.0 annot-version=v1.0 MMFKGGISLVWRLTSSESYGLSLFRWFFSGALGLLAFAYAILIWQRKTSLNWVKAAARAKKEAWKKLNVPQSFHSWMEDLAQIRLPSTCCVCLTSLVSPT GASKSASKTSVHRCSVCGVAAHFYCSEFAAKDCKCVAQAGFSQVQHQWSERWSKMEEISEMSAFCCYCDDPCGVPFVSDSPTWHCLWCQRLIHVKCHARM SKESGDVCDLGPLSRIILSPLCVKDFEDRSSSCSTPEEIPASSFRGHIRRRRTRAKNGNSFSANGRLQDASATTKALDYLLSGLVNLKKSGYDKTINCSK RDGRSKGDGDGLTHKKDGTTFNSQLKKYALVNLAQDARPLLVFINFKSGGQLGSSLRSRLNLLLNPAQVFELSSSQGPEAGLQLFSDVQYFRILVCGGDG TVAWVLDAIERLNFESPPPVAVLPLGTGNDLSRVLQWGRGFKMAKRQGGLCAVLHEVDHAAVTMLDRWKVNIIEENLDGQTKNEQSKFMINYLGIGCDAK LAYEFHVTRQEKPEKFSSQFVNKLRYAKEGARDIMDRACADLPWQVWLEVDGKDVQIPKDTEGLIVLNIGSYMGGVDLWQNDYEYDDEFTLQSMQDKMLE IVCVRGAWHLGKIQVGLSQATRLAQGNVIRIHASSSFPVQIDGEPFIHQPGCLEIKHDQQVFMLRRTLEEPRGHAVAIMTEVLADAECKGIINTSQRKIL LQQLALNLS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G63770		ATDGK2	diacylglycerol kinase 2 (.1.2)		Lus10010896 [exp]	0	1
AT5G63770		ATDGK2	diacylglycerol kinase 2 (.1.2)		Lus10012719 [exp]	1.0	0.9129
AT4G28550			Ypt/Rab-GAP domain of gyp1p su...		Lus10022905 [exp]	2.0	0.8481
AT1G75270		DHAR2	dehydroascorbate reductase 2 (...		Lus10023442 [exp]	4.0	0.8469
AT3G17430			Nucleotide-sugar transporter f...		Lus10017115 [exp]	6.7	0.8414
AT3G26330		CYP71B37	"cytochrome P450, family 71, s...		Lus10028926 [exp]	14.1	0.8440
AT2G46040	ARID		ARID/BRIGHT DNA-binding domain...		Lus10014762 [exp]	22.3	0.7944
AT3G05740		RECQI1	RECQ helicase l1 (.1)		Lus10026219 [exp]	24.2	0.8478
AT1G26840		ORC6, ATORC6	ARABIDOPSIS THALIANA ORIGIN RE...		Lus10036743 [exp]	25.0	0.8452
AT2G20980		MCM10	minichromosome maintenance 10 ...		Lus10019785 [exp]	25.5	0.8357
AT1G51980			Insulinase (Peptidase family M...		Lus10025839 [exp]	26.4	0.7450

Compare expression of checked genes

Lus10010896 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.