Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G03210 404 / 4e-141 unknown protein AT1G60790 48 / 8e-06 TBL2 TRICHOME BIREFRINGENCE-LIKE 2, Plant protein of unknown function (DUF828) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031359 [exp] 645 / 0 AT3G03210 410 / 2e-143 unknown protein Lus10020802 [exp] 503 / 3e-180 AT3G03210 436 / 1e-153 unknown protein Lus10007384 [exp] 494 / 9e-177 AT3G03210 432 / 4e-152 unknown protein Lus10002776 [exp] 71 / 3e-14 AT3G54860 102 / 3e-25 VACUOLAR PROTEIN SORTING 33, Sec1/munc18-like (SM) proteins superfamily (.1), Sec1/munc18-like (SM) proteins superfamily (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G080600 [exp] 482 / 2e-171 AT3G03210 438 / 4e-154 unknown protein Potri.017G139800 [exp] 464 / 1e-164 AT3G03210 432 / 1e-151 unknown protein Potri.010G043300 [exp] 47 / 2e-05 AT1G60790 604 / 0.0 TRICHOME BIREFRINGENCE-LIKE 2, Plant protein of unknown function (DUF828) (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10010965 pacid=23172507 polypeptide=Lus10010965 locus=Lus10010965.g ID=Lus10010965.BGIv1.0 annot-version=v1.0 ATGTTTGGCGGTATACAGCTGGGACTGTTCCTCGCCTGCATTGTACTGTTCGTCCCCATGGTAATGGCCGGCTGGCATTTGAGCCGCAACAAGATGCTCT TCTTCAGCGGCGCTCTCTTCATTTCTCTCGCGGTATGCGTCCATCTCACTCCTTATTTCCCTTCCGTTTCCGATTTCGTCACCTCAGTCCAGTCAGTCGT CGTATTCGATAACCGCGACGATTCTTCCTGCATCAACTCGGTTAACGACGTCGTCTGGGATGTCAAGCCTAGACGGCAGCAGGATGAGTCATCGTCATCG CCGTCTCCGGTAGTTTACGATATGAATTGGAGTTGGTCGAACGCTAGGAAAGTGAATGGATGTGAGTTTCAGAAACTAGGTCAGACTGATATCTCCGAGT TACTCAATGGATCGTGGATTGTTGTGGCGGGAGACTCGCAATCGAGATTATTAGTTCAGTCGTTTTTGAGCTTGGTTCTGGATCCTGAAAGAATGGAATC AATCAAAGGAGAATTGTTCAGACGGCACAGTGACTATAGCATCATTGTGGAAGAAATCGGACTGAAATTCGATTTCATTTGGGCGCCTTACGTTGTTAAT TTGACCAATATGATGACAGAGGTTAACCAGAAGAACAAAACTTATCCTGATGTATTGGTAATGGGAGCAGGGCTCTGGGATATGCTCCATGTGACGAATG CATCTCGTTACAGTGCCGATTTGAAATCGTTAAGGAGCTCCGTGGCAAGGTCACCGTTGAGGCATTTGTTTTGGCTTCCGATTCCAACGCTGATAAACGG GATGCTGAACACGGAAGAGAAGAGGGAGAAGATGAGTGATGAGATGTTGCATGCTTACGAACAGGCTCTGGAAGGTAGCGGGATCTTGCGTAAAGTTCAG TTGATCGATATCCAGTCGTTGAGCTGGAATTGCGGACCGAGATGTACAGTTGACGGAATGCATTATGATGGAGCTGTTTATGAAGCGGCTGTACAAATTC TGTTGAATGCATTGCTTATAGAATCTCATCAGAAGCTTGGTGGAGCTACCTGA
AA sequence Show only first row Show all	>Lus10010965 pacid=23172507 polypeptide=Lus10010965 locus=Lus10010965.g ID=Lus10010965.BGIv1.0 annot-version=v1.0 MFGGIQLGLFLACIVLFVPMVMAGWHLSRNKMLFFSGALFISLAVCVHLTPYFPSVSDFVTSVQSVVVFDNRDDSSCINSVNDVVWDVKPRRQQDESSSS PSPVVYDMNWSWSNARKVNGCEFQKLGQTDISELLNGSWIVVAGDSQSRLLVQSFLSLVLDPERMESIKGELFRRHSDYSIIVEEIGLKFDFIWAPYVVN LTNMMTEVNQKNKTYPDVLVMGAGLWDMLHVTNASRYSADLKSLRSSVARSPLRHLFWLPIPTLINGMLNTEEKREKMSDEMLHAYEQALEGSGILRKVQ LIDIQSLSWNCGPRCTVDGMHYDGAVYEAAVQILLNALLIESHQKLGGAT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G03210			unknown protein		Lus10010965 [exp]	0	1
AT5G66450			Phosphatidic acid phosphatase ...		Lus10041774 [exp]	3.5	0.8868
AT3G03210			unknown protein		Lus10031359 [exp]	4.2	0.9063
AT5G15740		RRT1	O-fucosyltransferase family pr...		Lus10034651 [exp]	7.5	0.8895
AT1G47310			unknown protein		Lus10011672 [exp]	8.0	0.8206
AT5G40650		SDH2-2	succinate dehydrogenase 2-2 (....		Lus10014573 [exp]	9.1	0.8334
AT1G01430		TBL25	TRICHOME BIREFRINGENCE-LIKE 25...		Lus10029454 [exp]	13.0	0.8556
AT2G33990		IQD9	IQ-domain 9 (.1)		Lus10015300 [exp]	13.4	0.8781
AT4G27350			Protein of unknown function (D...		Lus10038565 [exp]	17.1	0.8919
AT1G01430		TBL25	TRICHOME BIREFRINGENCE-LIKE 25...		Lus10005952 [exp]	20.5	0.8333
AT5G59020			Protein of unknown function (D...		Lus10040721 [exp]	20.8	0.8478

Compare expression of checked genes

Lus10010965 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.