Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G47120 283 / 4e-96 ATBI-1, ATBI1 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1) AT4G17580 184 / 1e-57 Bax inhibitor-1 family protein (.1) AT5G47130 118 / 1e-32 Bax inhibitor-1 family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10000589 [exp] 394 / 1e-139 AT5G47120 339 / 2e-118 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1) Lus10000097 [exp] 279 / 2e-95 AT5G47120 226 / 5e-75 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G151800 [exp] 294 / 2e-100 AT5G47120 310 / 2e-107 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1) Potri.003G082700 [exp] 288 / 2e-98 AT5G47120 300 / 3e-103 ARABIDOPSIS BAX INHIBITOR 1, BAX inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0453 [flax] [poplar] Apoptosis-Inhib PF01027 [flax] [poplar] Bax1-I Inhibitor of apoptosis-promoting Bax1
Representative CDS sequence Show only first row Show all	>Lus10011006 pacid=23148620 polypeptide=Lus10011006 locus=Lus10011006.g ID=Lus10011006.BGIv1.0 annot-version=v1.0 ATGGATGCTTTCGCTTCTTTCTTCGGCTCTCAATCCGCTTCCAGAAGCCGCTGGACCTCTGAGTCCCTCAAGAATTTCCACCAAATCTCCCCCGTCGTCC AGTCTCATCTGAAACAGGTTTATCTGACATTATGCTGTGCACTGATTGCATCTGGAGTGGGAGCGTACTTTCACATCCTATGGAACATCGGCGGCCTTCT AACGACTTTGGCTTGCATGGGCTGTATGGCCTGGCTTCTTGCCACCCCTCCACATCTGGAGCAAAAGAGAGTCTCCCTTCTGATGGCAGCTGGGTTGTTC GAGGGGGCTACCATCGGTCCCCTCATTGAGCTGGCAATCGATGTTGATCCAAGTCTTTTGATCACAGCCTTCGTGGGAACGGCAATCGCATTCGGTTGCT TCTCAGCAGCAGCAATGGTAGCCAGGCGTAGGGAGTATCTCTACTTGGCTGGCTTGCTCTCCTCCGGCCTGTCCATCCTCTTCTGGCTGCAATTCGCATC CATGATCTTTGGTGGATCCACAGCCCTCTTCACATTCGAGCTCTACTTCGGACTCCTGGTGTTCGTTGGCTACGTGGTGGTCGACACGCAGAACATCATC GAGAGAGCTCACCTCGGGGACCTTGATTACGTGAAGCACGCCCTCGACCTGTTCACTGACTTCATCAACGTCTTCGTCAGGATCCTCATTGTCATGGTGG GTTTTCTTCTGCCCTGTGGTTGTTTCTTGCCCATTCTGTTCTCTCTCGTTTTCGAACTAATCGGTCATCTTCTGTGTGGTTTTTCTTCGCAGTTGAAGAA CTCGGAGGAGAAGAAGAAGAAGAAGAGAAGAGATTGA
AA sequence Show only first row Show all	>Lus10011006 pacid=23148620 polypeptide=Lus10011006 locus=Lus10011006.g ID=Lus10011006.BGIv1.0 annot-version=v1.0 MDAFASFFGSQSASRSRWTSESLKNFHQISPVVQSHLKQVYLTLCCALIASGVGAYFHILWNIGGLLTTLACMGCMAWLLATPPHLEQKRVSLLMAAGLF EGATIGPLIELAIDVDPSLLITAFVGTAIAFGCFSAAAMVARRREYLYLAGLLSSGLSILFWLQFASMIFGGSTALFTFELYFGLLVFVGYVVVDTQNII ERAHLGDLDYVKHALDLFTDFINVFVRILIVMVGFLLPCGCFLPILFSLVFELIGHLLCGFSSQLKNSEEKKKKKRRD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G47120		ATBI-1, ATBI1	ARABIDOPSIS BAX INHIBITOR 1, B...		Lus10011006 [exp]	0	1
AT5G22060		ATJ2	ARABIDOPSIS THALIANA DNAJ HOMO...		Lus10004109 [exp]	2.0	0.9185
AT3G44110		ATJ3	DNAJ homologue 3 (.1.2)		Lus10013364 [exp]	2.0	0.9218
AT1G02170		AtMCP1b, ATMC1,...	LSD ONE LIKE 3, ARABIDOPSIS TH...		Lus10028157 [exp]	3.9	0.8941
AT5G04410	NAC	NAC2, ANAC078	Arabidopsis NAC domain contain...		Lus10017458 [exp]	4.2	0.8895
AT5G16990			Zinc-binding dehydrogenase fam...		Lus10010988 [exp]	5.0	0.8897
AT4G29120			6-phosphogluconate dehydrogena...		Lus10034977 [exp]	5.3	0.8903
AT3G12630		SAP5	stress associated protein 5, A...		Lus10015697 [exp]	6.3	0.8746
AT3G07090			PPPDE putative thiol peptidase...		Lus10025931 [exp]	6.7	0.8735
AT3G63000		NPL41	NPL4-like protein 1 (.1)		Lus10017163 [exp]	8.4	0.8825
AT1G76920			F-box family protein (.1)		Lus10028591 [exp]	8.9	0.8472

Compare expression of checked genes

Lus10011006 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.