Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G17860 155 / 7e-48 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73260 117 / 2e-32 ATKTI1 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) AT1G73325 102 / 1e-26 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73330 74 / 4e-16 ATDR4 drought-repressed 4 (.1) AT1G72290 49 / 5e-07 Kunitz family trypsin and protease inhibitor protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013732 [exp] 343 / 2e-121 AT1G17860 166 / 4e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039208 [exp] 341 / 7e-121 AT1G17860 172 / 2e-54 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039209 [exp] 317 / 2e-111 AT1G17860 179 / 6e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013730 [exp] 308 / 6e-108 AT1G17860 175 / 2e-55 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039210 [exp] 307 / 3e-107 AT1G17860 179 / 4e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10042301 [exp] 304 / 6e-106 AT1G17860 182 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013731 [exp] 307 / 7e-106 AT1G17860 172 / 5e-53 Kunitz family trypsin and protease inhibitor protein (.1) Lus10022302 [exp] 302 / 1e-103 AT1G17860 176 / 4e-54 Kunitz family trypsin and protease inhibitor protein (.1) Lus10026357 [exp] 295 / 2e-102 AT1G17860 181 / 6e-58 Kunitz family trypsin and protease inhibitor protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G153400 [exp] 189 / 7e-61 AT1G17860 223 / 1e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153466 [exp] 187 / 3e-60 AT1G17860 222 / 4e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153600 [exp] 182 / 3e-58 AT1G17860 217 / 3e-72 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067600 [exp] 174 / 5e-55 AT1G17860 196 / 9e-64 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067900 [exp] 174 / 8e-55 AT1G17860 183 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153200 [exp] 160 / 9e-50 AT1G17860 191 / 5e-62 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067800 [exp] 132 / 1e-38 AT1G17860 137 / 8e-41 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G006900 [exp] 83 / 1e-19 AT1G73260 79 / 6e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.001G309900 [exp] 76 / 8e-17 AT1G17860 90 / 2e-22 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G000400 [exp] 75 / 2e-16 AT1G73260 91 / 9e-23 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0066 [flax] [poplar] Trefoil PF00197 [flax] [poplar] Kunitz_legume Trypsin and protease inhibitor
Representative CDS sequence Show only first row Show all	>Lus10011090 pacid=23167552 polypeptide=Lus10011090 locus=Lus10011090.g ID=Lus10011090.BGIv1.0 annot-version=v1.0 ATGAAGACACTTACAATATCTTCATTCACCATAGTCCTCCTTGTCTCCTTTACCACACTTTCATCCGCAGCATCATCCCCGACTCCGGTCACTGACATTG ATGGTGCACCCCTCCGATTGGGCCGCAAGTACTTCATCCTCCCATCTGTCTCCGGAAACGGGGGCGGCCTCGCTCTAGGCAGAAGAACCGATACAAAGAA ATGCCCGCTCTCCGTGATTCAGGACGAACACGAGCTCTCCAAGGGTATCCCGGTAGTTTTTCTGCCCATCAACGCCAAGCCGGGCTACATCGTTCGAACG GACACCGATCTCAACATCGAGTTCACGGTCGAGACTGCCTGCAACGAAGCCCCCGTGTGGAAGGTGGAGAGTTATGACCATGACGTCAGGCAGTGGTTCA TTGGCACCGGTGGTATCGAAGGAAAGCCCGGTCCTAGGACTGTGGACAACTGGTTTAAGATTGCAAAATACGGCGGGAACTACAAGCTCGTGTACTGCCC TTCTGTGTGCAAGAGTTGCAAGGTTCAGTGTAAGGATGTCGGGGTTTATGTGGATGAATATGGCAAGAAGAGGCTTGCTTTTCCTACTGACGATGAGCCT TCCATTGTTAAGTTCATGAAAGCTCCTAAATAG
AA sequence Show only first row Show all	>Lus10011090 pacid=23167552 polypeptide=Lus10011090 locus=Lus10011090.g ID=Lus10011090.BGIv1.0 annot-version=v1.0 MKTLTISSFTIVLLVSFTTLSSAASSPTPVTDIDGAPLRLGRKYFILPSVSGNGGGLALGRRTDTKKCPLSVIQDEHELSKGIPVVFLPINAKPGYIVRT DTDLNIEFTVETACNEAPVWKVESYDHDVRQWFIGTGGIEGKPGPRTVDNWFKIAKYGGNYKLVYCPSVCKSCKVQCKDVGVYVDEYGKKRLAFPTDDEP SIVKFMKAPK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G17860			Kunitz family trypsin and prot...		Lus10011090 [exp]	0	1
AT1G17860			Kunitz family trypsin and prot...		Lus10013732 [exp]	1.0	0.9788
AT1G17860			Kunitz family trypsin and prot...		Lus10039208 [exp]	1.4	0.9755
AT1G73990		SPPA1, SPPA	signal peptide peptidase (.1)		Lus10013332 [exp]	1.7	0.9722
AT1G14550			Peroxidase superfamily protein...		Lus10009898 [exp]	2.0	0.9670
AT4G11650		ATOSM34	osmotin 34 (.1)		Lus10024511 [exp]	5.0	0.9670
AT3G26270		CYP71B25	"cytochrome P450, family 71, s...		Lus10019463 [exp]	6.7	0.9639
					Lus10022008 [exp]	8.5	0.9658
AT3G48280		CYP71A25	"cytochrome P450, family 71, s...		Lus10043308 [exp]	10.6	0.9642
					Lus10027915 [exp]	10.8	0.9574
					Lus10028589 [exp]	11.0	0.9426

Compare expression of checked genes

Lus10011090 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.