Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G27450 260 / 2e-87 Aluminium induced protein with YGL and LRDR motifs (.1) AT3G15450 251 / 8e-84 Aluminium induced protein with YGL and LRDR motifs (.1.2.3) AT5G43830 193 / 4e-61 Aluminium induced protein with YGL and LRDR motifs (.1) AT3G22850 182 / 1e-56 Aluminium induced protein with YGL and LRDR motifs (.1) AT5G19140 172 / 7e-53 AtAILP1, AILP1 Aluminium induced protein with YGL and LRDR motifs (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018484 [exp] 453 / 4e-163 AT4G27450 305 / 3e-105 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10033418 [exp] 229 / 5e-75 AT4G27450 369 / 2e-130 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10034883 [exp] 228 / 2e-74 AT4G27450 365 / 6e-129 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10006624 [exp] 198 / 5e-63 AT5G43830 374 / 2e-132 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10039382 [exp] 196 / 4e-62 AT5G43830 372 / 6e-132 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10041181 [exp] 194 / 3e-61 AT5G43830 369 / 1e-130 Aluminium induced protein with YGL and LRDR motifs (.1) Lus10034038 [exp] 166 / 2e-50 AT5G19140 389 / 3e-139 Aluminium induced protein with YGL and LRDR motifs (.1.2) Lus10010505 [exp] 161 / 1e-48 AT5G19140 392 / 4e-140 Aluminium induced protein with YGL and LRDR motifs (.1.2) Lus10021899 [exp] 78 / 6e-16 AT1G04210 609 / 0.0 Leucine-rich repeat protein kinase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G049900 [exp] 306 / 3e-105 AT4G27450 383 / 6e-136 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.004G040600 [exp] 305 / 5e-105 AT4G27450 366 / 2e-129 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.001G403000 [exp] 265 / 5e-89 AT4G27450 436 / 3e-157 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.011G122100 [exp] 265 / 6e-89 AT4G27450 428 / 7e-154 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.008G158400 [exp] 189 / 1e-59 AT5G43830 388 / 3e-138 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.010G081600 [exp] 187 / 1e-58 AT5G43830 391 / 3e-139 Aluminium induced protein with YGL and LRDR motifs (.1) Potri.008G203400 [exp] 161 / 8e-49 AT5G19140 397 / 4e-142 Aluminium induced protein with YGL and LRDR motifs (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0052 [flax] [poplar] NTN PF12481 [flax] [poplar] DUF3700 Aluminium induced protein
Representative CDS sequence Show only first row Show all	>Lus10011191 pacid=23147136 polypeptide=Lus10011191 locus=Lus10011191.g ID=Lus10011191.BGIv1.0 annot-version=v1.0 ATGTTGGCAATCTTCAAGAAAGGAGTGGTGAATCCGCCACAGGAGCTCAACAGTCCAGCTAATTCTCCTTACAATTCTTCCTCCAACCACCACCAGCAGC AGCTCCCTCACCAGATCGTCAACAGCTTCATCGCCGCCAATCCCAACGACTCCCTGTCGATCAAGTTCCGCGACGACGCCCTCCTCGCTTACGTCCCCCG CCGCAACTCCCTCACCGCCCCCCAAAGGTTGTTCTGCGGAGTGAACGACGTGTACTGCATCTTCAACGGGAACTTGAACAATCTGTGCAGCTTGAACAGG CAGTACGGCCTCGCCAAGGGGAGCAACGAGGCTCTGTTCGTGATTCAGGCGTACCTCACTCTCCGTGACCGTGGGCCTTACCCTGCCCACAAGGTTCTCA AGGATCTGGAAGGCCCATTCGGGTTCGTGATCTACGACTCCAAATCTGGTCGGGTCTTCGCCGCCCGGGGCGCGGCAGCTGAAGGAGGAGTGGGGCTGTA CTGGGGGATAGCGAGGGATGGTTCGGTGGTAATTACTGACAACTTGGAGGGGGTTAAGGGGAGCTGCGGGAAGTCGTTCGCTCAGTTCCCTGCTGGGTGC ATGTACGAGAGCCAAGACGAAGGGCTGACGAGCTTCGAGCACCCGTGTAGCGAGCTCAGGGCGATGCCGAGGATCGACAGTGAAGGAGTTATGTGTGGAG CTGATTTCAAGGTCGATGTTCAGGCTAGGGTCAGCGGCGGAGGTGGGATGCCGCGTGTTGGGAGTGAAGTAAACTGGGCTTTGGGTGGTTCTTCGCAAGC TTGA
AA sequence Show only first row Show all	>Lus10011191 pacid=23147136 polypeptide=Lus10011191 locus=Lus10011191.g ID=Lus10011191.BGIv1.0 annot-version=v1.0 MLAIFKKGVVNPPQELNSPANSPYNSSSNHHQQQLPHQIVNSFIAANPNDSLSIKFRDDALLAYVPRRNSLTAPQRLFCGVNDVYCIFNGNLNNLCSLNR QYGLAKGSNEALFVIQAYLTLRDRGPYPAHKVLKDLEGPFGFVIYDSKSGRVFAARGAAAEGGVGLYWGIARDGSVVITDNLEGVKGSCGKSFAQFPAGC MYESQDEGLTSFEHPCSELRAMPRIDSEGVMCGADFKVDVQARVSGGGGMPRVGSEVNWALGGSSQA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G27450			Aluminium induced protein with...		Lus10011191 [exp]	0	1
AT2G39950			unknown protein		Lus10040223 [exp]	1.0	0.9678
AT3G06850		DIN3, LTA1, BCE...	DARK INDUCIBLE 3, 2-oxoacid de...		Lus10037492 [exp]	1.4	0.9673
AT4G27450			Aluminium induced protein with...		Lus10018484 [exp]	2.0	0.9581
AT4G19130			Replication factor-A protein 1...		Lus10006887 [exp]	3.7	0.9326
AT3G56680			Single-stranded nucleic acid b...		Lus10038997 [exp]	4.0	0.9443
AT3G56680			Single-stranded nucleic acid b...		Lus10027292 [exp]	4.2	0.9478
AT2G27760		IPPT, ATIPT2	tRNAisopentenyltransferase 2 (...		Lus10020566 [exp]	4.2	0.9428
AT5G67480		ATBT4, BT4	BTB and TAZ domain protein 4 (...		Lus10019299 [exp]	4.6	0.9636
AT5G57580			Calmodulin-binding protein (.1...		Lus10001630 [exp]	6.0	0.9370
AT2G17020			F-box/RNI-like superfamily pro...		Lus10025093 [exp]	8.8	0.9381

Compare expression of checked genes

Lus10011191 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.